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current user: public |
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Query: TM0016 TM0016 281897 Purified-2001-08-24, from T.maritima |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 | |||||||
# | Score | Template | Links and tools | %id | First | MRMSLKSWKEIPIGGVIDKPGTAREYKTGAWRVMRPILHKEKCIDCMFCWLYCPDQAIIQEGGIMKGFNYDYCKGCGLCANVCPKQAIEMRPETEFLSEEG | Last |
1 | -6.970 | PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890; | ali follow.. | 22 | 1 | ...................................................................MDPPVCSGCYLLLFACPIIFASIMKKE....... | 32 |
2 | -5.310 | PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030; | ali follow.. | 13 | 33 | ......................................ETDASTQYNDLFSYCHFG--------------EDKPACKHCPIHC.................. | 70 |
3 | -4.330 | HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348; | ali follow.. | 14 | 3 | .......................VDTKLINLKLWGYITMKKMIAYCGLDCEKCDAYIATINDNQEILPEHINCQGCVFCDNMCGIRQCALEKGVATCGD.. | 101 |
4 | -4.080 | PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii] | ali follow.. | 13 | 138 | ..............................................................ENFEGYSYKKIYKCDFCDDIYDNLREATKHENSHFQHD. | 175 |
5 | -4.010 | PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258; | ali follow.. | 11 | 22 | .....................................APRTDCPKREQCLRASAYDGVLARGLQKITVNPLIPTSEQGCKAFADNTPVLFAHGITHLYDE. | 85 |
6 | -2.870 | PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759] | ali follow.. | 3 | 5 | ...............FVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDI | 98 |
7 | -2.770 | PB004588 Q64QH1_BACFR/1-389 PB004588; Pfam-B_4588; | ali follow.. | 11 | 1 | ...................................................MCTTNAVNEKISYTINMDTQKVSCFLLLAGACDNSDRIETETQA...... | 54 |
8 | -2.670 | PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451; | ali follow.. | 12 | 29 | ..............................................GACPFFKAGDEFILKRTPEQDDFYHLMDG-KFCGEACNDGTQPVIFKIERIDIPE | 113 |
9 | -2.670 | PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis] | ali follow.. | 22 | 446 | ..........................................................ARRQQGLYQLFKDFCESCNKCA..................... | 471 |
10 | -2.600 | PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276; | ali follow.. | 9 | 44 | .............GIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQH.. | 129 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |