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Query: TM0009 TM0009 281890 Purified-2001-02-14, from T.maritima

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst MIGPRDLLNIALRIESTGYSYYKNLTEKTEGETKALFERLAEQERDHSRKFKEILEKYEQDLNPSDEVLGYLEALAEISIFPKLEETPPDDLREAVRRAIEVEKDSIVFYSEILSYVPEKEPVQTIIDEEKKHLRDLLRLEVLast
1 -5.980sp|Q9H4H8|FA83D_HUMAN Protein FAM83D OS=Homo sapiens GN=FAM83D PE=1 SV=3  ali   15  20.........................TPHLELYLSDSLRNLNKERQFHFAGIRSRLNHM.................................................................................... 52
2 -5.930sp|Q502W7|CCD38_HUMAN Coiled-coil domain-containing protein 38 OS=Homo sapiens GN=CCDC38 PE=2 SV=1  ali   11  21..EPEELLQVLRELEEQNLTLFQYSQDVDEEEVNKREKVIQDKTNSNIEFLLEQEKMLKANCVREEEKAAELQLKSKLFSFGEFNSDAQEILIDSLSKKIT------QVYKVCIGDAEDDGLIQKLVKVESRLVELCDLIES 158
3 -5.660sp|Q494V2|CCD37_HUMAN Coiled-coil domain-containing protein 37 OS=Homo sapiens GN=CCDC37 PE=1 SV=1  ali   16  4..EPQQLLDVFRELEEQNLSLIQNSQETEKEELSHTLKHTQIRMDREVNQLKQWVTTMMMSITKEEDTAAELELKARVFHFGEYKGDQQDKLLESLNCKVL------DVYRHCTGTQQEANLVQMLTIIEHQLDELLENL.. 139
4 -5.360sp|Q9NU22|MDN1_HUMAN Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2  ali   12  2............AMRNRGLEIYGDASTPDNLDLKVLLHSLGLVGNSVCDILLALHTETRSTVVGSPTSS--VSTLIQTAILIVQYLQRGLSLDRAFSEACW------EVYVCSQHSPANRKLVQALLEK............. 114
5 -5.080sp|Q8N201|INT1_HUMAN Integrator complex subunit 1 OS=Homo sapiens GN=INTS1 PE=1 SV=2  ali   12  7..NLGTTIKLVIFNELSSARALQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREI.................................................................................... 72
6 -4.970sp|Q5TG08|YV009_HUMAN Putative uncharacterized protein LOC388900 OS=Homo sapiens PE=1 SV=2  ali   17  50..TYTDVISETLCSMKKRKDNLNQLYQHHWTEWNYFDKHLKELQDNFSREMKN......................................................................................... 100
7 -4.760sp|Q8TBZ2|MYBPP_HUMAN MYCBP-associated protein OS=Homo sapiens GN=MYCBPAP PE=1 SV=2  ali   14  1.....ELIDCTLPTSWENSGFW-SRLEYLGDEMTGLVMTKTKTQRGLMEPITHI........................................................................................ 53
8 -4.730sp|Q8TDY2|RBCC1_HUMAN RB1-inducible coiled-coil protein 1 OS=Homo sapiens GN=RB1CC1 PE=1 SV=3  ali   77LVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVS................................................................................... 135
9 -4.710sp|Q14152|EIF3A_HUMAN Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens GN=EIF3A PE=1 SV=1  ali   15  40..QCLDLLRNNSRVE----RLYHDIAQQAQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMH----------------LETRLVQLDSAISME-----LWQEAFKAVEDIHGLFSLSKKPPKYYNKVSTVF. 164
10 -4.660sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1  ali   11  91..SVLHIIKSTFVHCKNSESVYSGCLHLVSDLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV-----------HSLLDICSVISSMDHAFHANKQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQL.. 224

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.