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Query: TM0010 TM0010 281891 Purified-2005-03-03, from T.maritima

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPLTTNTILICAGGACISAGEKSVKDAFEEELRKYGLDEVVRVIETGCMGACTLGPIAVIYPESVFYQKLTPDAAREIVEEHILKGRIVEKYLYKASEGKPVPRVHEEVPFFKKQVRIVTRNLGVIDPTKIEEYIARDGYFALAKALQMKPEDVIKEIKDSGLRGRGGAGFPTGLKWELAARQKAEKKFVVCNADEGDPGAFMDRSVLEGDPHAVIEGMAIAAYAIGAQKGFVYVRAEYPLAIERLNIALNQAREYGFLGGNIMGTDFSFDIEIRIGAGAFVCGEETALMASIEGERGQPKVKPPYPVEKGLWGYPTVINNVETLANVPWIIRNGAKEFRKYGTENSPGTKVFALAGKVKNTGLVEVPMGITLRELIYEIGGGIAGDKKLKAIQTGGPSGGCIPAEYVDTPVDFESLQKLGAIMGSGGMIVMDEDDCMVDVARFFLEFTVEESCGKCTPCREGTKKMLEILEKITSGEGTEEDIEELEKLAHVVKDTSLCGLGQTAPNPVLSTLRYFRDEYLAHVKEKRCPSKKCKALISYVIDPEKCVGCTACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVTPALPVEEAVELast
1 -6.740sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   13  4.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................LCNVCGNLCTDCDRFLHLHRRTKTHQRQVFKEEEEAIKVDLHEGCGRTKLFWLMALADSKTMKAMVESSEACRFCGSSVCSDADCQEYAKIACSKTHPCGHPCGGVK--NEEH------------CLPCLHGC................... 143
2 -6.080tr|Q5QPA5|Q5QPA5_HUMAN Mitochondrial ribosomal protein S18A (Fragment) OS=Homo sapiens GN=MRPS18A PE=2 SV=2  ali   13  3...........................................................................................................................................................................PWGPRGAEGCRHSLPTQLPHVSAPPGRKVDIRSVNYTH----HPMPTFPLPWAFPLAPS----------ELQRELQRLSPLPRHSGLLPNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVKPI--KKGPRWNRVRMPV-----GSPLLRDNV............................................................................................................................................................................................................................................................................................. 133
3 -5.060sp|Q8ND82|Z280C_HUMAN Zinc finger protein 280C OS=Homo sapiens GN=ZNF280C PE=1 SV=1  ali   14  13...................................................................................................................................................................................................................................................................................................................................................................................................................................................ECHSKIKDFASHFSIYIHCSFCTNCNKAFVNHMMSSHSNHPGKRFCIFKKHSGTLRGITLVCLKCDFLADSSG---------LDRMAKHLSQ--RKTHTC........................................................................ 104
4 -4.440sp|Q6N043|Z280D_HUMAN Zinc finger protein 280D OS=Homo sapiens GN=ZNF280D PE=1 SV=3  ali   13  11...................................................................................................................................................................................................................................................................................................................................................................................................................................................ECCSEIKDFANHFPTYVHCSFCTSCSKAYVNHMMSFHSNRPSKRFCIFKKHSENLRGITLVCLNCDFLSDVSG---------LDNMATHLSQ--HKTHTCQVVM.................................................................... 106
5 -4.300sp|Q96DY7|MTBP_HUMAN Mdm2-binding protein OS=Homo sapiens GN=MTBP PE=1 SV=1  ali   16  5...........................................................................................................................................YHLLKRSISASINPEDSTFPACSV-----GGIPGSKKWFFAVQA-----YQFCSSDWQEIHFDTEKDKIEDVLQTNIEEC.................................................................................................................................................................................................................................................................................................................................................................................................... 78
6 -4.180sp|Q6ZRH7|CTSRG_HUMAN Cation channel sperm-associated protein subunit gamma OS=Homo sapiens GN=CATSPERG PE=2 SV=3  ali   13  759............................................................................................................................................................................................FL----DKGTEYSFAIFLSAQGHSFRTQSELGTAFQLHSQVDVGVVLADPGCIEASVKQKDKKLCYDQGISGHHLMET----SMTVNVVGSSGLCFQETHLGPHMQGN--MVPVFIGCPPGKRLAFDITYTLEYSRLKN---------------------KHYFDCVNVNPEMPCFLFRDIFYPIQDLVTGDSGSFQGSYVLLVV--GGPTLDSL------KDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPCLENAPCY----------DNVPQGIFAPEFFFKVLVSNRGVDTSTYCN---------------YQLTFLLHIHG................................................................................ 1058
7 -4.140sp|Q9H7D0|DOCK5_HUMAN Dedicator of cytokinesis protein 5 OS=Homo sapiens GN=DOCK5 PE=1 SV=3  ali   15  1...........................................................................................................................................................................................................................................................................HTYGLYVNFKNFVCNIGEDAELFMALYDPDQSTFISENYLIRWGSNGMPKEIEKLNNLQAV----------FTDLSSMDLIRPRVSLVCQIV........................................................................................................................................................................................................................................................ 82
8 -4.090sp|Q92608|DOCK2_HUMAN Dedicator of cytokinesis protein 2 OS=Homo sapiens GN=DOCK2 PE=1 SV=2  ali   20  2............................................................................................................................................................................................................................................................................THSLYVFVRNFVCRIGEDAELFMSLYDPNKQTVISENYLVRWGSRGFPKEIEMLNNLKVV----------FTDLGNKDLNRDKIYLICQIVR....................................................................................................................................................................................................................................................... 83
9 -3.990sp|Q96I76|GPTC3_HUMAN G patch domain-containing protein 3 OS=Homo sapiens GN=GPATCH3 PE=2 SV=1  ali   22  3........................................................................................................................................................................................................................................................................................................KQLPELNPPVLMPRGNVGTPLFLELIRACRLPPRIITQLQLQFPKTGSSRRYGNVPFEYEDS......................................................................................................................................................................................................................................................... 66
10 -3.890sp|Q96NL8|CH037_HUMAN Uncharacterized protein C8orf37 OS=Homo sapiens GN=C8orf37 PE=2 SV=1  ali   13  2......................................................................................................................................................................GGSSIPCGIGTNISWRACDHLRCIACD----------------------FLVVSYDDYMWDKSCDYLFFRNNMPEFHKLKAKLIKK-----------------------KGTRAYACQCSWRTIEEVTDLQTDHQLR................................................................................................................................................................................................................................................................................................................ 93

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24