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Query: TM0011 TM0011 281892 Purified-2004-02-02, from T.maritima

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst MRMAKVKSLEELMKIKEQALKDLQLRGETGKRGKITVAMGTCGIAAGAKETLKAIVEALNEYNINDIAVVQSGCMGLCEVEPTVEVRLEGQEPVIYGRVTPENAKRIVKMHILEGRVVEDLVVKRGEALast
1 -7.060sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1  ali   11  13..............................RRHPWPTNVLLYGSLVSAGDA---LQQRLQGREANWRQTRRVATLVVTFHANFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFY..... 102
2 -6.080sp|A6NNL5|CO061_HUMAN Uncharacterized protein C15orf61 OS=Homo sapiens GN=C15orf61 PE=2 SV=2  ali   22  76.................................................................NYHVLRTGCFPFCSKAPALKVVNLGIPTLLYGLGSWLFARVTETVHTSYGPITVYFLNKEDEG 154
3 -5.620sp|Q7L8A9|VASH1_HUMAN Vasohibin-1 OS=Homo sapiens GN=VASH1 PE=1 SV=1  ali   32....EIKKSRPLTGLMDLAKEMTKEALPIKCLEAVILGIYLTNSMPTLERFPISFKTYFSGNYFRHIVLNFAGRYGA--------LGMSRREDLMYKPPAFRTLSELVLDFE................ 133
4 -5.560sp|Q86Y33|CD20B_HUMAN Cell division cycle protein 20 homolog B OS=Homo sapiens GN=CDC20B PE=2 SV=3  ali   15  44..................................MQLCEQSECVWKGCKD----------GVRDESFHLKSSGDINDSILQPEVKIHITGLRNDYY................................ 95
5 -5.490sp|Q9NXH8|CI167_HUMAN Torsin family protein C9orf167 OS=Homo sapiens GN=C9orf167 PE=1 SV=2  ali   26............................LLDKRDVVSCFRDEMAGEGDQARAENLAAQLSFYRVAGREFAVTGCKQVVATVNLL............................................ 84
6 -5.020sp|O14657|TOR1B_HUMAN Torsin-1B OS=Homo sapiens GN=TOR1B PE=1 SV=2  ali   10  52............................PLEYRHVKMCVRAEMRARGDEDIVTRVAEEMTFFPRDEKIYSDKGC...................................................... 100
7 -4.930sp|Q86V25|VASH2_HUMAN Vasohibin-2 OS=Homo sapiens GN=VASH2 PE=2 SV=2  ali   34....EIRKMRPLSGLMETAKEMTRESLPIKCLEAVILGIYLTNGQPSIERFPISFKTYFSGNYFHHVVIYCNGRYGS--------LGMSRRAELMDKPLTFRTLSDLIFDFE................ 135
8 -4.740sp|Q9NX77|ENK14_HUMAN HERV-K_16p3.3 provirus ancestral Env polyprotein OS=Homo sapiens PE=2 SV=2  ali   59AALSGIKIWNTTYQLLRTKTKTPTFNITLISEWVIPI---RSCVKPPYMLLVGNIIMMPDAQTIECHNCKLFTCIDLLVRAREGVWIPVSLHRPWESSPSIHIVNEVLKDILKRTK............ 180
9 -4.690sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2  ali   30.............................................GSTAELITGLVQLVPQSHMPEIAQEAMEALLVLHQLDSIDLWNPDAPVETFWEISSQMLFYICKKLTSHQMLSSTEILK.... 108
10 -4.660sp|Q9UKH3|ENK4_HUMAN HERV-K_6q14.1 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=1  ali   97........................................QSCVKPPYMLVVGNIVIKPDSQTITCENCRLLTCIDLLVRAREGVWIPVSMDRPWEASPSIHILTEVLKGVLNRSK............ 181

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 5 8 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24