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Query: TM0016 TM0016 281897 Purified-2001-08-24, from T.maritima

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100
# Score Template Links and tools%idFirst MRMSLKSWKEIPIGGVIDKPGTAREYKTGAWRVMRPILHKEKCIDCMFCWLYCPDQAIIQEGGIMKGFNYDYCKGCGLCANVCPKQAIEMRPETEFLSEEGLast
1 -8.880sp|Q8NCS7|CTL5_HUMAN Choline transporter-like protein 5 OS=Homo sapiens GN=SLC44A5 PE=2 SV=2  ali   17  1.........................................RCTSPSVLLNLCPTTQI--------------------CVSKCPEKFLTYVEMQLLYTKDK 41
2 -7.930sp|Q8IWA5|CTL2_HUMAN Choline transporter-like protein 2 OS=Homo sapiens GN=SLC44A2 PE=1 SV=3  ali   23  11.........................................QCPTPQICVEKCPDRYLTYLNARSSRDFEYYKQFC-LQDGDCPAVLIPSKP......... 73
3 -7.920sp|Q53GD3|CTL4_HUMAN Choline transporter-like protein 4 OS=Homo sapiens GN=SLC44A4 PE=2 SV=2  ali   20  8..........................................CPTPQVCVSSCPEDPWTVGKNEFSQ-EVFYTKNRNFCLELCPSFLLPSAP......... 74
4 -7.910tr|E9PBA0|E9PBA0_HUMAN Uncharacterized protein OS=Homo sapiens GN=SLC44A4 PE=4 SV=1  ali   20  6..........................................CPTPQVCVSSCPEDPWTVGKNEFSQ-EVFYTKNRNFCLELCPSFLLPSAP......... 72
5 -7.840sp|Q8N4M1|CTL3_HUMAN Choline transporter-like protein 3 OS=Homo sapiens GN=SLC44A3 PE=2 SV=4  ali   19  15..................................................NMCGKKNSPVEGAPLSGQDMTLLNRMALCVSNCPEEQLDSLEEVQFFANTS 83
6 -7.680tr|E9PCE9|E9PCE9_HUMAN Uncharacterized protein OS=Homo sapiens GN=SLC44A4 PE=4 SV=1  ali   20  6..........................................CPTPQVCVSSCPEDPWTVGKNEFSQ-EVFYTKNRNFCLELCPSFLLPSAP......... 72
7 -7.660sp|Q8WWI5|CTL1_HUMAN Choline transporter-like protein 1 OS=Homo sapiens GN=SLC44A1 PE=1 SV=1  ali   20  16..................................................NICGQKNTKLEAIPNSGMDHTQIKSVALCVAACPRQELKTLSDVQKFAEI. 83
8 -7.110sp|Q86VP1|TAXB1_HUMAN Tax1-binding protein 1 OS=Homo sapiens GN=TAX1BP1 PE=1 SV=2  ali   15  7......................................SFDVHKKCPLCELMFPPNYDQSKFEEHVESHWKVCPMCS........................ 45
9 -6.780sp|Q9HBG6|IF122_HUMAN Intraflagellar transport protein 122 homolog OS=Homo sapiens GN=IFT122 PE=1 SV=2  ali   18  67......................................SEELVPLCYRCSTNNP----------LLNNLGNVCINCRSSYDVLH--LVEFYLEEGITDEEA 124
10 -6.710sp|Q5FWF4|ZRAB3_HUMAN Zinc finger Ran-binding domain-containing protein 3 OS=Homo sapiens GN=ZRANB3 PE=2 SV=2  ali   22  3..........................................CLRCQQCSLKCQEEFWIRSNNKVFETEHGVCQLCNV....................... 61
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Awobuluyi M, Yang J, Ye Y, Chatterton JE, Godzik A, Lipton SA, Zhang D. Subunit-specific roles of glycine-binding domains in activation of NR1/NR3N-methyl-D-aspartate receptors. Mol Pharmacol. 2007 Jan;71(1):112-22. Epub 2006 Oct 17.