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Query: TM0001 TM0001 281882 Purified-2001-08-24, from T.maritima

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40
# Score Template Links and tools%idFirst MVYGKEGYGRSKNILLSECVCGIISLELNGFQYFLRGMETLLast
1 -5.720d1skza1 g.3.15.1 (A:7-58) Factor Xa inhibitor antistasin {Mexican leech (Haementeria officinalis) [TaxId: 6410]}  ali model 3D-neighbors follow..  32  10........GSACNIITDRCTCSGVRCRVHGFQRSRYGCE.. 43
2 -5.060d1agga_ g.3.6.2 (A:) omega-Agatoxin IV, IVa, IVb {Funnel web spider (Agelenopsis aperta) [TaxId: 6908]}  ali model 3D-neighbors follow..  29  9..YGKCTWGGTKCCRGRPCRCSMIGTNCE............ 35
3 -4.040d1bx7a_ g.3.15.1 (A:) Hirustasin {Medicinal leech (Hirudo medicinalis) [TaxId: 6421]}  ali model 3D-neighbors follow..  23  2NTCGGETCSAAQVCLKGKCVCNEVHCRIYGLKKDENGCE.. 43
4 -3.290d1y29a_ g.3.6.2 (A:) Huwentoxin-X {Spider (Selenocosmia hainana) [TaxId: 209901]}  ali model 3D-neighbors follow..  44  6...GKPCYGATQKI-----CCGVCS................ 23
5 -3.210d3brda2 b.2.5.8 (A:195-380) DNA-binding protein LAG-1 (CSL) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}  ali model 3D-neighbors follow..  18  31...AQKSYGNEKRFFCPPPCIYLIG................ 52
6 -3.130d1bhpa_ g.13.1.1 (A:) beta-Purothionin {Wheat (Triticum aestivum) [TaxId: 4565]}  ali model 3D-neighbors follow..  16  12.CYNLCRARGAQKLCANVCRCKLTS................ 35
7 -3.060d1x68a2 g.39.1.3 (A:37-70) Four and a half LIM domains protein 5, FHL-5 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  9.LVGKGFLTQNKEIFCQKCGSGMDT................ 32
8 -3.060d1nj7a_ g.63.1.1 (A:) Attractin {California sea hare (Aplysia californica) [TaxId: 6500]}  ali model 3D-neighbors follow..  17  15MQHKNCEDANGCDTIIEECKTSMVERCQNQEFESAAGSTTL 55
9 -2.950d3pzya_ c.57.1.0 (A:) automated matches {Mycobacterium avium [TaxId: 1770]}  ali model 3D-neighbors follow..  11  63VILTSGGTGIAPTDSTPDQTVAVVDYLIPGLAEAIR..... 98
10 -2.920d1ylka1 c.53.2.0 (A:2-163) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}  ali model 3D-neighbors follow..  19  70LAISQRLLGTREIILLHHTDCGMLTFTDDDFKRAIQ..... 105

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.