| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 |
# |
Score |
Template |
Links and tools | %id | First |
MTVQQFIKKLVRLVELERNAEINAMLDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYFLVRFGRRKKIDTEIGVGDLVLISKGNPLKSDYTGTVVEKGERFITVAVDRLPSWKLKNVRIDLFASDITFRRQIENLMTLSSEGKKALEFLLGKRKPEESFEEEFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAVDNLVERLWGKVSLVRIGHPSRVSSHLKESTLAHQIETSSEYEKVKKMKEELAKLIKKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGVSKEKIKEMAEWIKLNSQIQDIRDLIERKEEIIASRIVREAQVVLSTNSSAALEILSGIVFDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPTILSEDAKDLSRTLFEELITRYPEKSSLLDTQYRMNELLMEFPSEEFYDGKLKAAEKVRNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFVKKKGTYVIF | Last |
1 | -124.000 | [L] KOG1803 DNA helicase |
ali follow.. |
24 | 42 | .KFLDNVREWPKIFEAEIEAQFEKLDEMIRNVGWRVIEERGLCVGNLIVTSKYYDSYCGEV--GDAILRTRWLKAGTPVLLNKLNEDGHLSDGHVVDCTAGIVKVCADKNVDFSTLNYILTPSTNSGALKFLQSVIKSLSSDSVHLVNLAYRSIPMPSIHDRKIGNLPETLNPSQVAAVSAAMNTQRLLCIQGPPGTGKTRVIAEIVHQLMKKKKKVLVCAPTHVAVRNAMDATTGRIEEMPEEKAEQQLCLLANTKDEFQNHKSASKL-------------------------------------------------EEIKKQLSTMSTSDPLYKKMSYEYYLIRNSIFRSIFYPKLAVFSTLGTSSIQKLPEYNADVMIVDEAAQCTEPATWVPVLTCKKLILVGDQKQLPAVVLSDKAMNFKLSLMEKLAEEFNNINILLNEQYRMNKKIMNWSNEVFYENQLTAHSTVSDITLRDICPNLP-------EDHVLNNPIMMINMENVK-DRSHEEFESHSFTNTDELNLVTEYVNRLVVDGINPKAIAVISPYYAQIEKLRRSIPFRVDVNTVDAFQGHERQVVIFCLVRDNDEGQIGFLNETRRLNVAVTRARRQFVLIGNGRMMKGNKHLLKLYKHLQSEKVIFG. |
672 |
2 | -111.000 | [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1) |
ali follow.. |
27 | 234 | .DAYEYQRSYGPLIKLEADYDKQLKESQALE-------------ISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSGMQHPDYIVRLPNSFQDTFTLELKPSKTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKSFDVPLPKEFSIPNFAQLNSSQSNAVSHVL-QRPLSLIQGPPGTGKTVTSATIVYHLSKIHKRILVCAPSNVAVDHLAAKLRDKVVRLTAKSREDVESSVSNLALHNLVGRGAK---------------------------------------------------GELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLDT-KFRTVLIDESTQASEPECLIPIVKGKQVILVGDHQQLGPVILERKAAGLKQSLFERLISL-GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGI----------PMMFWANYG----REEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVE. |
836 |
3 | -86.500 | [A] KOG1804 RNA helicase |
ali follow.. |
23 | 90 | LNMSNYKEKFSTLLWLEEIYAEMELKE-----------------YNMSGIILRRNGDLLVLEVPGLAEGRPSLYAGDKLILKTYNGHAIEYISYVTEIHEEDVTLKINPEQAYNFEPMDVEFTYNRTTSRRCHFALEHVIHLGVKVLFPEEWVDEIQTPKARKMEFFNPVLNENQKLAVKRILSGDC-YILFGPPGTGKTVTIIEAVLQVHFADSRILVCAPSNSAADLVCLRLHES-TMVRVNATCRFEEIVIDAVKPY------------------------------------------------------------------------------------CRDGEDIWKASRFRIIITTCSSSGLFYVRVGHFTHVFVDEAGQASEPECLIPLGISGQIVLAGDPMQLGPVIKSRLAMGLNVSFLERLMSR-PLLVTKLVKNYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKG-----------PLIFHGVRG----SEAREGKSPSWFNPAEAVQVLRYCCLLAHSQVSASDIGVITPYRKQVEKIRILLRNDIKVGSVEEFQGQEYLVIIISTVRSNDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLVRDPCFGALLEYSITNGVYMG. |
738 |
4 | -74.300 | [L] COG1112 Superfamily I DNA and RNA helicases and helicase subunits |
ali follow.. |
20 | 160 | .SFEDYLSIHYRLLREDAVSPLRESVLRYKVNPNYITGSSLAVYDHVRIDGYTISSSVIAAKLSFSVATSRRLISGSLVLLSNDD--QTFRIGTVCARPLSEIDVKFEDISISLDPREEYVMIEATSAYKHVLRSLQRLSASTFPMKDYLVHCKSNQETALEPFGPGEYILDSSQLKAYQSML-TKRLSIIQGPPGTGKSFVTLKAIETLLENTHPILVACQTNHAVDQILIRLLHGASVMRLGSRTK-DPEIAAVTIFQKAKKHSFKAAYNEIRHKKQRLIKQITNIMHNFNLEFVTLSYLHSKGIITTSQLES-LESAYAAAEKELNRLYRFYLKVDRERIGFSNKRAAILLRGANVIGMTTTGLNRDILERINPKICFIEEAADVLEGPIIPAVFPSEQLVLIGDHKQLRPGCLRQDPFNLSISMFERLVEN-DMEYTRLTMQRRMHPQIRRLVSSVYED--LSDYEITKYWP---------------------EIRRFFLT-----HSRIEDNDGFASKINLFEAQMLVQFAVYLINNGVEPQKITCLTFYAAQKDLIERLLSESIKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARRGLFIFGNAQLVAESPLWWDAINTLMNDETIQGL |
968 |
5 | -33.600 | [R] COG3972 Superfamily I DNA and RNA helicases |
ali follow.. |
13 | 206 | ..........................................................................................................................................................................FDQKQRRAALVTIDGP--QRIRGLAGSGKTVILAMKAAHLHMTNDKILVTFFTKSLRSPIKDLVTKFYRHYKEIDPDWNNIHIRHG-------------------------------------------------------SNSSGTYADACRRSGRMPRSYSSARDAAPRGVEPFSFACEELINSAQS--------------LEYYDHILIDEG-QDFPDGFYKLCFEKKNIVWAYDELQ---NILNVKMRRISLARAEKNLPPGATNDTVLSKCYRNQREVLVA-AHALGFGIYSNIVQLSPDHWRDVGYDVLTPDFQVGNDIEILRPVENSPVALDTDGLPPLIGNFIASSFEKEISWITKEIINFLDMGLLPEDIIVVALDDRHMRNYFRYLSGKITLSTVYRAKGNEAAVVFALGVDALSL---RLRADRNKIFAAFTRTKAWLRVSGLGDSARR---VAVEIDTALRNFPHLKF |
657 |
6 | -26.600 | [R] COG3973 Superfamily I DNA and RNA helicases |
ali follow.. |
12 | 199 | ............................................................................................................................................................SHHSDTQMKNIVSTIQKEQNQIIRN--EKSKILIVQGAAGSGKTSAALQRVAYLL-DAGQIVLFSPNFLFNSYVSSVLPE------LGEENMEQATFQEYIEHRLGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYVTRLSSEGMIFKNIIFRGQKLITKEQIQSYFYSGELTRSAFTDNKLLYEDAAFLYMQDLIEGRKKNTKIKHLFIDEAQDPFQMAYMRSIFPAASMTVLGDINQ---SIYAHTINGDQR--MDACFEDEPAEYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFN-----------------------------------------RSGEMPLVVKTEGHESCQKLAQEIGRLKKKG--HETIAVICKTAHQCIQAHAHMSEYTDVRLIHK-KGIEFDAVLVYDASEEHYHT----HDRRLLYTACTRAMHMLAVFYTGEA....................... |
758 |
7 | -22.900 | [L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
ali follow.. |
13 | 37 | .........................................................................................................................................................................QFAPQQDEALKAVSQRSQLFRLFGYAGTGKTTLARHFAENV---DGEVVFAAFTGKAAQVLRSK-----------------GATNAKTIHSLIYRPRGEEEVEDEETGKTSIAPMFAINRQ-------------------------------------------------------------SPVAKAALI--------------------IVDECSMVDEALGKDLMSFGTPILVLGDPGQLPPVSGGGYFTNHEPDFLLTDIHRQARDNPIIQLAMQVREGKEIMHGDYGTAQVISKGQVTQPLVLEADQVLVGTNRTRRRYNQ------RLRELKGFTSEYPQSGDKLVCLRNDPAKGLLNGSLWQVMSSSKETVKPGIFEDVEGEIPWSTRKRYDEFDYGTVHKAQGSQWNNVVLFDESWAFR-----DTRERWLYTAITRAAERLTIV............................ |
409 |
8 | -19.000 | [L] KOG2108 3`-5` DNA helicase |
ali follow.. |
12 | 237 | ................................................................................................................................................................PDECSKYMLSLNDRQRDAACSNIST-PLMVIAG-PGSGKGLL-----------PSNILAMTFTKAATSEMRERIGKAAKDITISTFHSFSLQLCRMHADKLRTSEFSVYGHGQQRRAIIEAVRLYEEEKKNGSKTSVPCESGEGLNGAGAGAGKASGKSPEQCRKMGNEIGAKILGNYNDILKACDALDYHDLISCSVTLLSDFPEVFKEC--QDTWKAIIVDE-TSTMQYKLLRMLGSHNHITIVGDDDQ---ITVKECHNEEAQCAYV-------IDKIIEITNDGSTPCCSHGDIAILYRRQVSG--KVFQNAFRQRKIPFNVHGVAFYRKKVVQVILAMLKTT--NEDNDLRSVLQYLMDDVAEFISTHCTTTEEEDAIKEKKGCNQLHSFINYISERETE-ENSVTLTTIHQANENEIPLLHESNGNASESGT---LEEERRL-VAMTRARKKLFFLGDMSVNDCRKVHENL............. |
825 |
9 | -17.000 | [L] COG0210 Superfamily I DNA and RNA helicases |
ali follow.. |
16 | 1 | ...................................................................................................................................................................MNPLLNGMNDRQAQAVQTT--EGPLLIMAG-AGSGKTRVLTHRIAYLIDEKFNILAITFTNKAAREMKERALA------NPATKDTLIATFHSMCVRILRREADHIGYNR------TIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAEELRRSEALDFDDLIMMTLFDANPDVLAYYQYQYIHVDEYQDTNHAQQLIKLLASKNICVVGDADQ---SIYGWRGADMQNILFEK--DYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKL------------------------------------TQNADGEQLVYYRANDERDEAVFVASTISNMSELGKNFKDFAVLYRTNAQSRTIEEALKSNIPYTMVGGYSRKERDLIAYLTIVANPADNISF---ERIVNEP-KRG------VGPGTL-------DKLRQFAYESDQSL.. |
436 |
10 | -16.400 | [L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
ali follow.. |
14 | 10 | .........................................................................................................................................................................TWTDDQWNAIVSTGQD---ILVAAAAGSGKTAVLVERMIRKITAEERLLVVTFTNASAAEMKHRIAEALQVLK-TEGELIGDEVLDELFEDLVDRYTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEPAVSFKRAKAVKGDEFDPALLDEATDLRNGAKKLAAKQEKSIIDFSDLILTAENDKGEREPSEAQFHEVLVDEYTNLVQESILQLVTSTGNLFMVGDVKQ---SIYRFRLA--EPLLFLSKYKRFTERKIDLNKNFRSRADILDSTNFLF--------KQLMGGKIGEVDYDEQAELKLGAAYPDNDETETELLLIDNAEDTDASEEAEELETVQFEAKAIAKEIRKLISSPIQYRDIVILLRSMPWAPQIMEELRAQVYANLTSGYFEAVEVAVALSVLKDNPYQDIPLASVLRSPIVGADENELSLIRLEN----KKAPYYEAMKDYLAAGD..... |
682 |
11 | -13.900 | [S] COG3421 Uncharacterized protein conserved in bacteria |
ali follow.. |
9 | 54 | .........................................................................................................................................................................PFFEWQKSALENFVNRPTHLLFNMATGAGKTMMMAALILYYFEKGRHFLFFVNQNNIVDKTENNFIDPAHAKFL--TEKILQGDTVIPIRKVEMFSPHSDGIEIKFTSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQDELDLEVELKANAGNAEIERKGWEHMVLELLLNKNGLLEFTATLPENADVQQKYADKIITKGLKEFLQKG------YTKEINLVSSTLNKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKTIDESKADYSAFLNWAENVQADDFEFLDTFSGSLNNSDNANEQGKTRTEQALKFMQDNKFGFAHLANWTNSETNKNKTEKTDSETEKLLNNLEA---ADNPIRAI-----------------FTVDRLT--EGWDLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQ----LIGRGVRY...................... |
515 |
12 | -12.400 | [KL] COG1061 DNA or RNA helicases of superfamily II |
ali follow.. |
14 | 78 | .........................................................................................................................................................................EPYPHQSEALAAWKLAGRQGVVVLPTAAGKTYLAQLAMQAT---PRTTLIVVPTLDLMHQWYAHLVAAFPDAEVG-------------------------------------------------------------------------------------------------------LLGGGSRDKSPVLVATYDSAAIHAALGNQYALIVFDECHHLPTDFSKVIAEYAIAPYRLG----LSATPERTDGKHIGQEVYRKRAEDLAGKALAEHEIVQIKVKLSQQERERYNNLIQIRNDFLRQSKV--------------SLGSIQGWQMFVQMSARSQSGRRAMLAHREAKEIALGTDSKLRILANLLAKHYPERVL-IFTADNATVYKISQ----DLLIPAITHQTPVKERHEILTKFRE---GEYNTLVASHVLNVDVPAAAIAIILSGTGSTREYIQRLGRILRKGNIQNKQAIL |
435 |
13 | -11.600 | [V] COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
ali follow.. |
13 | 462 | .........................................................................................................................................................................GLRYYQEDAVRAVEKAQQEILLAMATGTGKTRTAIAMMFRLIQSQKRILFLVDRRSLGEQALGAFEDTRI------------------------------------------------------------------------------------------------GDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEYDCIVVDEAHRGYILSAYRRILDHFDAVKIA----LTATPALHTVQIFGEPVY----------------RYTYRTAVIDIDQDPPI--QIITRNAQEGVYLSKGEQVERISPQGEVINDTLEDDQDF-----------EVADFNRGLVIPAFNRAVCNELTNYLDPTGSQKTL-VFCVTNAHADMVVEELRAAFK-TMITRFNKERLPNIVVTVDLLTT----GV--DIPSINIVFLRKVRSRIMKGRATRLCPE................... |
851 |
14 | -11.400 | [R] COG4889 Predicted helicase |
ali follow.. |
14 | 174 | ........................................................................................................................................................................YSPRPHQQTAIEKAFQTHDRGKLIMACGTGKTFTALRLSEEVARLNARILFLVPSISLLSQTLKEWTADLRPVAVCSDSKVSKAAEDIAAYDL--------------------------------------------------------------------PVSTDGALIAEKLEHRKRA------AGLTVVFSTYQSHAAQEAGAEPFDLVICDEAHRTTGIT------------LAGEDPSNFTRIHDASYIKAAKRLY-------------MTATPRLFDDVSSMDDEAIYGPRLGFGEAVEKGLLTDYKVV-----------------VMTVDEQVAASALTVLGSTPGEELTLDMTSAIIGAWNGLAKRSGKEQDTKTAVAFARDIKTSQQIAESSVACQHVDGMNALERNSRLTWLKAPTQSMETKILTNARCLSVIFFNPRNSMVSVGRVMRKSPGKNYGYII............ |
610 |
15 | -11.300 | [R] KOG0354 DEAD-box like helicase |
ali follow.. |
11 | 72 | .........................................................................................................................................................................SFRDYQFNIVQKALFENVLVAL--PTGLGKTFIAAVVMMNYLRPKSYIVFMAPTKPLVTQQMEACYKITGI---------------------------------------------------------------------------------------------PKSQTAELSGHVPVTTRNQYYQSRNVFFVTLNDIKHGICDRTRISCLVIDEAHRSTGNYAYVEVVHNKNFRILA--LSATPGNKLEAIQNVIDSLHISRIEIRTENSIDISFPVDLSAEITDIRDQKLNKGNYYRIQNAKDITSFTVVQAKQAFLAMSGQNATFAYPLNLLLNHGIRPFYQILLRDQSFVGHPKLEHLERIVTEYFEKEQTKDTRIMIFVEIRSSAEEILRFLGKFYPNVRPAIFIGQSAVRKAAGMSQKLQNETV-FQKGEVNTLIATSIGEEGL--IGEVDMIICYDASASPIRMLQRMG..... |
531 |
16 | -10.600 | [L] COG3857 ATP-dependent nuclease, subunit B |
ali follow.. |
11 | 2 | ..........................................................................................................................................................................................TLQIIAGKAGTGKTTHLMDEVGEKIKKTKTYIFIVPDQMTFQSFLNKQNLAGMLTQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQKDKLKIFSRATS--KKGFYSELAKLFKEMKQEEISVDELEKSAANLSTSVSSKVHDISLIYQKYEELLAGKFLENEDYLRLLADKIIESDY--LNQTEIIIDTSFSKQELTVIEKLMQKCDKVTVSNVPEIHKGLEDFSMFKASTEAYFALLEMAKLNKIQVEPKRANSDSLAFLANAWGDNKYSSYEGGANDLTI-------------------------------------------QANNRRAEMEGVAREIRQLALNGYRYRDIAILT---RNIGDYDILCETVMESFDIPIFIDKKRAMAFIEFIRS-----IDAILFNWKYEPIFQAVKTEFFFDVAENATIMRRKADILENYVLENGI.... |
428 |
17 | -10.300 | [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase |
ali follow.. |
16 | 121 | ...........................................................................................................................................................................TLGQKHYVD-AIDTNTIVFGLGPAGSGKTYLAMAKAVQALQSKSRIILTRPAVEAGEKL---------------PGTLNEKIDPY--------------LRPLHDALRDMVEPEV---------------------------------------------------------------IPKLMEAGIVEVAPLAYMRGRTLND---AFVILDEAQNTTQMKMFLTLGFGSKMVVTGDITQVDLPGGQKSGLRL---VRHILRGVDDVHFSELTSSDVVRHQLVGHIVDAYEDYEEREARELKRKR.............................................................................................................................................................................. |
334 |
18 | -10.100 | [L] COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) |
ali follow.. |
13 | 94 | .........................................................................................................................................................................QLTPFQEKVLLQVVDKQKPTLVHAVTGAGKTEMIYQVVAKVINAGGAVCLASPRIDVCLELYKRLQQDFSC------------------------------------GIALLHGESEPY------------------------------------------------------------------FRTPLVVATT----HQLLKFYQFDLLIVDEVKNSVKENTATSTNELDKKVRLGERLNLPRRFHGNPLIIPKPIWLSDFNRYLDKNRLSPKLKSYIEKQRKTAYPLLIFASEIKKGEQLAEILQE------------------------QFPNEKIGFVSSVTEDRLEQVQAFRDGELTILISTTILERGVTFPCVDVF------VVEANHRLFTKSSLIQIGGRVGRSMD---------RPTGDLLFFHD--GLNASIKKAIKEIQMMNKEAGL...................... |
432 |
19 | -9.770 | [KL] KOG1123 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 3`-5` helicase subunit SSL2 |
ali follow.. |
13 | 331 | .........................................................................................................................................................................VLRPYQEKSLRKMFGNGR-GVIVLPCGAGKSLVGVTACCTV---RKRALVLCNSGVSVEQWKQQF--------------------------------------------------------------------------------------------------KMWSTADDSMICRFTSEAKDKPMGCGILVTTYSMITHRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLG----LTATLLREDD---------------------------KIADLNFLIGPKLYEANWLE---QKKGYIARVQCAEVWCPMSPEFYRE-------------YLTTKTSKKMLLYVMNPSKFRSCQFLIKYHEQRG---DKTIVFSDNVFALKHYAIKMNKPF----IYGPTSQNERIQILQNFKFNSKVNTSF--DLPEANVLIGGSRRQEA-LGRILRAKKGAIAEEYNAFFYT....... |
677 |
20 | -9.730 | [L] COG1111 ERCC4-like helicases |
ali follow.. |
10 | 16 | .........................................................................................................................................................................EARTYQQLLAADVIRKGN-SMIVAPTALGKTVVAVLVAAERLRRGSKVLILSPSKPLAIQHEESFREFMLA------------------------------------------------------------------------------------------------TCTSLTGSIKPEERKERWIKSQIISATESDILAGRYDLRDVSLIVFDECHRAVGSYSYVFLASARHPLILGGDPDVRPYLKPIKIEWVKVRMTPELEDIRELLRKVLKNRLKMLKNLGVIDTISVGKKDLLKARGRVQNRIARSTSPPRACYRALASCINVEHALELLETQGIRPLHQYLLRLKEKKTKAAKGLLLDRLMEILKRELKGDEARIIVTQFRDTLEEIYQRCKQKQQRDIIKSFRMGNHDVLLSTSV-----AEEGI--DIPSVDLVVGRKRKGRMVV............................ |
472 |
21 | -9.560 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family |
ali follow.. |
13 | 698 | ......................................................................................................................................................................IQATLRSYQTEGVHERLRKMHLNILADDMGLGKTLQAIIAVTQSKLEKGSSLIVCPTSLVYN--FRKFNPEFRTLVIDGVPS-------------------------------------------------------------------------------------------------QRRKQLTALADRDVAITSLLQKDVELYKSFRFDYVVLDEA-HHIKAKSVKMIQSDHRLILTGTPIELMPGLLSSYDR-FVGKYIRTGNYMGNKADNMVALKKKVSPFIKDLPPVELYQSYAASAKQELSRLVKQEGFERIHIHVLATLTR---HPAIFAK-------------DAPEPGDSAKYDMLMDLLSSLVDSG---HKTVVFSQYTKMLGIIKKDLESRIPFVYLDGFNDPSLLVFLISL----KAGGTG-------LNLATDRVHR----IGQSRSVTLNTIEEKILTLQNRKKSLVK. |
1142 |
22 | -9.560 | [R] COG1203 Predicted helicases |
ali follow.. |
15 | 13 | .........................................................................................................................................................................SPYEYQKEAMDNLLEGKSL-IIRAPTGAGKTEASLIPFIYGLNDYPQLIYSLPTRTLVESIGERA-------------------------------------------------------------------------------------------------IKYASFKKLRVAIHHGKKATSSLFEEDIIVTTIDQTAGAYLSGIASALTVFDEV-HTLDPEKGLQTAAGLPSIIMS--ATLPDVFIERVKERIEKN--GKVEIMDVKNESEIKSRRNRKVELINRPDEMLTADTVLKEAENCRKLVVVVNTVERAQNLYLDLRKKIDYPIFLL----------------HSRYLEKDRAEKEKSFEKVFGKNGKGECIFIST----QVIEVGMDISSPIEVAPIDALQGRNGEFHVFGLARDSSNPYAPYLKELIESTITEIRSKGDFPLDWQTELQLVNNVLSSHFEFFMDSKFFYQ. |
408 |
23 | -9.520 | [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) |
ali follow.. |
12 | 276 | .........................................................................................................................................................................HLFRYQVTCVQELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKPALIVCPATLMKQ--FHTWWAPLRVVVLHATGSGQRASREKRQ----------------------------------------------------------YESDASESEAEESKTSIKLRGASSSFHRYAKNLVESVFTRGHILITTGLRIYGDLILPREWGYCVLDEGHKIRNPDSEIQIRTVNRIILSGTPIQVFPGRLGTNASNVQVQTAYKCACMLRDSPYLLR---RMKLDVAA--QRKAYQDFLQGSDMQKIL-----NGKRQMLYGIDILRKICNHPDLV----TREYLLHKEDYNYGDPEKSGKLKVIRALLTLWKKQG---HRTLLFSQTRQMLDILEIGLKPDVHYCRMDGFNKNEYFDVFLLTTRV---GGLGVLTGADRVILARERAWR----LGQKKDVV---VYRLMTAGTIEEKIY... |
760 |
24 | -9.510 | [S] COG3854 Uncharacterized protein conserved in bacteria |
ali follow.. |
11 | 113 | ...............................................................................................................................................................................IGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADELHKRVVIMPEVIVIDEIRTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDTLLRGRQPSPQTRTVDEQGKVAITRQLSVVNGRGGQLATPEESFAPARPSNGWRASGQML------SEFDRLLDESFNYPEAIDFGSSARQPGPNGEDLPLHVYPYGVSRHQLEQVISV-------LTLPVVLTKDIDNADAILALRSHVKNHAKLRQMAKARHVPIHVIKSSTIPQITRGLRRLLNMEDPEVADDRELQLFLHNGSDDEMDAEEARLAVEQIVIPKGQPVE---LLPRSPQVRKMQHELVEHYRLKS-----GEEPN---------------------RRLRI........................................ |
576 |
25 | -9.470 | [R] COG0433 Predicted ATPase |
ali follow.. |
11 | 23 | ................................................................HADVSVEEMRVGKFLVI---QGRRSRFFCLLTDVSLGTANPRILANPPNINDDFLIDVLAGSGTYDVELLPVKTIPAHFSQVFEASERDFRLVFGWEDDPFRRNFAIGEPLDMAVPVCLDLDRFNGVFGKSGTGKSFLTRLLISGIIHKQAAVNLMFDMHSEYGWEAMR-EGKTVSTVKGLRQLFPGEVEIFTLDAESTKRRGVRGAQELYLSFDQIEIEGFELGLSEAALDNANILFSEFGSSWISRLLVMSNEEIKVFCEEKQGHPGSIMSLQRKLKRLENL-LLQCLEAGKHVVIEFGSQSNLMITRRIHSVITIEEAHRFLDSAI---AREMRKLVVDQRPSGIDNEVMSQ----IGTRITCLLNDEKDIEAIFTGVAGGQNLRSVLAKL-------DSKQQAL.................................................................................................................................................................................. |
528 |
26 | -9.330 | [O] COG0464 ATPases of the AAA+ class |
ali follow.. |
11 | 222 | ........................................................................................................................................................................KDAISKVREMIELPLKHPELVLLQGPPGTGKTMLA-EIMSKYYGESERAIKNAPAIIFLDEIMDGLKARKNVIVIGATNRPE------ALDIALRRPGRFDREIELTEGRLEIFQIHTRGMPLADNVNLMDFAQITYGFVGADIAALCREAAMSALRRILPKINLNEPEISKEILDALQVTREDFENALKDVQPSAIREILIEVPNVSWEDV-LERVKELLKEVVEWPLKNPESYRDIG---EAPKGVLLYGPPGTGKTLLAKAIAH------------ESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPS--------------IIFLDELDSLAPIRGTSVGEPQVTARILNQLLSEM-PALLRPGRFDELILVPVPDEGARREIFRVLAEDVDIEKLDQYTGADKKAGRHALREDLHAKKV----RQKHFLQAIEETGPSV--MKYYEAIKGE................... |
749 |
27 | -9.310 | [O] KOG0741 AAA+-type ATPase |
ali follow.. |
10 | 223 | ......................................................................................................................................................................LDKEFSDIFRRAFAFRVFPPEIILLYGPPGCGKT-LLARQIGKMLNAREPKVVNGPSEANIRKLFADAEEEQR--RLGANSGLHIIIFD-EIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAA-QSTAMNRHIKASTKVEVDMEKAESLQVTRGD-ENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALA--------------AKIAEESNFPFIKICSPDKM--------IGFSETAKCQAMKKIFDDAYKSQLS-DDIERLLDYVPIGPRFSNLVLQAL-LVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNATTIHVPNIATGEQLLEALELLGNLKDKERTTIAQQVKGKKVWIGI |
707 |
28 | -9.200 | [B] KOG0389 SNF2 family DNA-dependent ATPase |
ali follow.. |
10 | 288 | .........................................................................................................................................................................QLADYQIIGLNTVMHKQEMNILADEMGLGKTIQVIAFLAYLKENGLAHLIVVPSST-LDNWEAEISRWCPELVVGSQ--------------------------------------------------------------------------------------DERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEER--KMFRVCKLDYVIFDEAMTTQRYANLITINARMRILLTGTPLQVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQE-RAKRIMKPF-QKIYYHELVDYYSNNKGEVCSS--SERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANAICDSGKFLYLDTLLPKLKAEG---HRVLLFSQFTMMLDIVEEYLRRKFGFCRLDGFNGDDSIFVFLLSTKA---GGVGHDIDFNPYN-AEDRCHR----MGQQRPISESTIEEGILMAAEEK...... |
792 |
29 | -9.120 | [R] COG1202 Superfamily II helicase, archaea-specific |
ali follow.. |
14 | 215 | ........................................................................................................................................................................TELLPVQVLAIKNGLLKGENLLVVSATASGKTLIGELAGIPKALEGKKMLFLVPLVALANQKYEDFKRRYSKLGLKVAIRVGMS----------------------------------------------------------------------------------------RIKTREEPVVVDTGIDADIIVGTYEGVDYLLRSGKKIGTVVIDEI-------------------MIDDEER-GPRL---------DGLIARLRKLYPKAQFILSATVGNPQELARSLGMKLVLYDERPIARNESEKWRIIAKLCKAEVMRKSSKGFKGQTIVFTYSRKRCHELASFLTGKGLKAKPYHSGLPYKITEMEFQAQTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRKGKVYLI--VEPGKKYSAQMDETEDEVALKLLTS................................... |
573 |