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Query: [R] COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides, from VFDB

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIYEIAMLPVQKDKISEFRQAFGDVVPLLKRARGYRGHVLAQGVETPEVFNLIVRWRSLNDHTPGFEASEDHEQFMEGIQDYFSGEPTVYHLEGDNSGWSDYRHGKSGAALast
1 -61.300[R] COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides  ali follow..  100  1MIYEIAMLPVQKDKISEFRQAFGDVVPLLKRARGYRGHVLAQGVETPEVFNLIVRWRSLNDHTPGFEASEDHEQFMEGIQDYFSGEPTVYHLEGDNSGWSDYRHGKSGAA 110
2 -46.500[S] COG1359 Uncharacterized conserved protein  ali follow..  11  1MLIQMVSINVKQGHAADFLEAFRINYEGTRQEPGNLRFDVLRNPDDDHSFVIYEVFKSPEA-LDAHRKTEHYQECVRRIDPILAGPRTKTFYNVEMADFLAAGQA..... 104
3 -24.000[S] COG3224 Uncharacterized protein conserved in bacteria  ali follow..  14  15.FEYHFAHRVTPDHHEIFLECQEQLKILVTKYPGYISSESTELRSDIFVAETVIRFDTLEN-FMGWIDSPERRQLIYLEENAGYQFEGKVNTEGYSRWLKRKLSKPS... 121
4 -10.800[S] COG3254 Uncharacterized conserved protein  ali follow..  11  1MQRMGMVLGLKPEKVEEYVRLHAAVWPDVLTACNIKNYSIYLRRPENLLFSYFEY-TDYAADMAKMAADPKTQEWWAVCIPCQEPLAT...................... 92
5 -6.180[S] COG5470 Uncharacterized conserved protein  ali follow..  12  1MAKGYWIAQVDVRDSERYKDYVSTAKPAFERFGAARGGSVTELEGTARARNVVIEFPSVQHAIDCY-NSPEYQAAAK................................. 79
6 -6.090[S] COG5507 Uncharacterized conserved protein  ali follow..  10  4..VDGFLVAVPTANIEAYKKLASAAGAVWKEH-GALNYRAVQAKDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDEWKSIFDGKRM..................... 106
7 -5.500[W] KOG1574 Predicted cell growth/differentiation regulator, contains RA domain  ali follow..  12  1MELKI------------NIDGLERSVSGVTDTTTCSQIALAHATSQRGRFVMVEKYRNVERRLA.............................................. 54
8 -5.290[U] COG5120 Membrane protein involved in Golgi transport  ali follow..  7  40LLVFGFFMIAGFSKSVSFFLRKDRMLGSISFFSG--------------LLLTLFHFPIIGFFVECLGFFNLFKVFYPLIISFLRTVPYIGPY.................. 117
9 -5.260[P] KOG1743 Ferric reductase-like proteins  ali follow..  9  39.ILFLIGVFLIIGSQKTYIFFTRP-----NKRRGSLFFLV-------GAFLILLKWTFLGFIIESLGIIGLFGDFFGVIVQFLRSMPIIGPILSHPAIAPIVDKLAGVRV 135
10 -5.200[C] KOG4116 Ubiquinol cytochrome c reductase, subunit QCR8  ali follow..  7  25....IITYSLSPFQQRPMAGFFKTSTQNMFRR---VMTEGLYVAIPFGIAYYIYCWGKERNEFLNSKHGRHLVE.................................... 91
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.