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Query: [C] KOG4631 NADH:ubiquinone oxidoreductase, NDUFB3/B12 subunit, from VFDB

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGGGHHEPFKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKYPHVVGQWAHFKKLILPGWKAGVAFTAALIFVEEAYQYKTHGTTSWDGHHLast
1 -70.700[C] KOG4631 NADH:ubiquinone oxidoreductase, NDUFB3/B12 subunit  ali follow..  100  1MGGGHHEPFKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKYPHVVGQWAHFKKLILPGWKAGVAFTAALIFVEEAYQYKTHGTTSWDGHH 103
2 -8.950[S] COG5202 Predicted membrane protein  ali follow..  20  287IGYNGLDSSKHPRWDRVKNIDKFEFADNIKCALEAWNMNNKWLRNYVYLRVAKKGKRPGFKSTLSSAMWHGVSAGYYLTFVSAAFIQTVAK............ 384
3 -8.920[S] COG4269 Predicted membrane protein  ali follow..  10  28.........................LVNLLLTIITLGVYSAWATVRRRRYNTELNGDRFDYHAEPIEILKGRLMVIGGVILFYILLAIA.............. 94
4 -8.600[S] KOG2705 Predicted membrane protein  ali follow..  10  284LTYKGEDKNGQPDWSGCSNVKLLETGNTMEHYVQSFNVNNQWVGQYIYKRLKFLNNRTISFLAVWHGYHSGYYMTFLMEYMVVSTEKQITR............ 383
5 -7.900[C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2  ali follow..  9  40...........................SGDRDVMMNTVAPVWDGNETWLVLGG-AALFGAFPLAYAVVLSALYLPLIFMLVGLIFRGVAFEFRFKAKPAKQH. 113
6 -7.170[S] KOG2704 Predicted membrane protein  ali follow..  14  279SGLGFSETQTKAKWDRAKNVDGVELAKSAVQIPLFWNIQSTWLRHYVYERIVKPGKKAGFFQLLASAVWHGLYPGYIIFFVQSALMIDGSK............ 380
7 -6.890[K] KOG4109 Histone H3 (Lys4) methyltransferase complex, subunit CPS25/DPY-30  ali follow..  19  71..............RQYLDSTVVPILLQGLGALAKDRPENPFLANFLLREKDRYNAENQN........................................... 118
8 -6.310[R] COG0319 Predicted metal-dependent hydrolase  ali follow..  20  119LGYDHIED------------DEAEEMESLETEMQEMGFTDPYLAEK......................................................... 153
9 -6.300[S] KOG2706 Predicted membrane protein  ali follow..  11  304...........YNFTTIVNTREVERCWTFREGMKHWNVCQYWLAVNVYK-LFPSKKYRTGATLLCSAYWHGFRPGHYFCIMGAPFYVSLED............ 385
10 -6.190[S] COG3216 Uncharacterized protein conserved in bacteria  ali follow..  9  1..........MGKRVLFRRRNPDGLFERLRIYM--------WPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFASFFPLGSHFAI.............. 71
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.