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Query: [E] COG0040 ATP phosphoribosyltransferase, from VFDB

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGKLLTMAMPKGRIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRFILAKPMDVTTYVEHGVADVGIAGKDVMLEEERDVYEVLDLNISKCHLAVAGLPNTDWSGVAPRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGLADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDDVIDEMASRLSLVVEGETAKLast
1 -97.100IDP02488 gene: hisG; ATP phosphoribosyltransferase catalytic subunit [Bacillus anthracis str. `Ames Ancestor`] GBAA1425 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  42  2..RNIQIALTKGRLEKHVIPLFEQIGIDCSELKNKGRKLVFQSKNTDISFILVKAVDVATYVEHGVADIGVVGKDILMENEKDIYEMLDLGVGVCKFCVASIPTYNPKSRKKCIATKYPHITSNYFHNKGEDVEIIKIEGSVEIAPILGLADAIVDIVETGKTLQENGLIVFEEMYSISARMIVNKAALKTKKDEIFSIINMMEQEILSGK.. 211
2 -79.100IDP04049 gene: hisG; ATP phosphoribosyltransferase [Vibrio cholerae O1 biovar eltor str. N16961] VC1132 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  29  8QTQRLRIAIQKGRLSQECQELLKKCGVKFN---IMGERLVVHSLNMPIDLLLVRDDDIPGLIMDGVVDLGFVGENVLEETRLDFTTLRRMDFGGCRLSIAIEKDAEYRGNGKRIATTYPQLLKAYMDRQGVDFSTCMLTGSVEVAPRAGLADAIADLVSTGATLEANGLKEVEVIFESKATLIQRPGAFAADKAALDKLLTRMHGVQQAKESK 232
3 -78.100IDP90801 gene: hisG; ATP phosphoribosyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1597 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  27  3ENTRLRIAIQKGRLSKESIELLSECGVKMH---IHEQSLIAFSTNLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELEYKLLKKLDFGYCRLSLALPQENKKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPRANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSEKQALVDKIMLRVAGVMQARESK 227
4 -76.100IDP00554 gene: hisG; ATP phosphoribosyltransferase YPO1549 [Yersinia pestis CO92]  ali follow..  32  4.KTRLRIAMQKGRLSDESQELLSRCGIKIN---LQQQRLIAFAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRALRRLDFGGCRLSLAAPLDAEYTGQDTRIATSYPHILKQYLDKQGVRFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMSDKQQLIDRLMTRIQGVIQARESK 227
5 -8.330IDP05622 ABC transporter, substrate-binding lipoprotein [Clostridium difficile 630] CD0999 [Peptoclostridium difficile 630]  ali follow..  14  36.VKQVKVAVPDGLPAVAIAKLANENPEI--------------KEGYETVYSIEKTPEISTRVMKKDADIAIVPSNIAYNKTSSYNIVGTVGMGSLYLVSTENIKDYSDLVGKEVGCTGKGTIKSLLLQKDIDIKFNYVSSASELVPLLGKVKTGIEPALSALMSKNPDIKIIKSLNDSQSTLIVKSEFLRDNKDFVDSFVGQLSNSID..... 256
6 -8.020IDP02641 amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. `Ames Ancestor`] GBAA0640 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  73........................EGFDVDVAKALAKKI----DEKKLELKEVTSKTRIPLLKNGDIDAIIATMTITEERKKEVDFSDVYFKAGQSLLVKKGKSIDDVKKGVKVLAVKGSTSTNNIRQKSPEATVLEFENYSEAFTALGKGDVLTNAILYGMAKQDSNYEVVGKIFTDEPYGIAVQKGADDLTKEINSLIKDMKA........ 258
7 -7.990IDP05631 ABC transporter, substrate-binding protein [Clostridium difficile 630] CD1979 [Peptoclostridium difficile 630]  ali follow..  13  57....LFVALDKG--------YYKEEGL-------------------DVEIVQPPESGAETLVATGKADFGISYQEQVTEDPLPIKAVATVIQHNTSGFASPKEKTAKDFEGKTYGGW--AVFKAVMKKNRADFNKLKITGQDDFFAAMKTVDFAVKADLIGYDLNFIPVKDLDERLDYTPLIISNETVLKDNPELAKKFLKATTK........ 253
8 -7.840IDP91987 ABC transporter substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100008765 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  13  55....LYVAKEKG--------YFKEAGV-------------------DVDLKLPPEESSSDLVINGKAPFAVYFQDYMAEKGAGITAVAAIVEHNTSGIISRKSDSPKDLVGKKYGTW--AMLKTLVESQGGDFEKVEKVPNNDSNSITPIANGVFDTAWDGILAKSQGVDANFMYLKDSPVIIANNDYLKDNKEEARKVIQAIKK........ 251
9 -7.760IDP91031 solute-binding periplasmic protein precursor for ABC transporter [Yersinia pestis KIM 10] y4125 [Yersinia pestis KIM10+]  ali follow..  13  38.AGVVRIAVPFGYIDPQTKKL---VGYDVDVANAIAKDL-----GVKVELRATNPANRIPLLASKKVDLIAANFTITDERAKEVNFSLPYFATGQKFIARKGVKTPEDIGKLRIGADKGTVQEITLREHYPTAKVISYDDTPLAFTALGNVQAITGLLGNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETLIKLEK........ 248
10 -7.670IDP05207 putative sulfonate ABC transporter,solute-binding lipoprotein [Clostridium difficile 630] CD2365 [Peptoclostridium difficile 630]  ali follow..  11  56....GPVAESAG--------IYKDLGLNVK---------------------TVGNGKVPEAMAAGKMDAGYIGTKGLVPKGSPITIAANNHTGGSEYLIVSKDKEPKDLIGKKIATDYGPETGLPTDPSKYEVVNMDSDKDKYLALKTGKIQAFTSCDPWGSVAENDGAGKIIASTQYKCSFSLNKNFIKEHPDLAKKLVLAHTKAIE..... 253
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.