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Query: [P] COG1613 ABC-type sulfate transport system, periplasmic component, from VFDB

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSNSLAGIVKLALVVGSLQLGSIGLALADTTILNVSYDPTRELYKEFNAAFAEKWQADTGETVTIQTSHGGSGKQARSVIDGLEADVVTLALEADIDAIAKESGKIPADWKSRFENNSAPYTSTIVFLVRKGNPKAIKDWGDLVREDVQVITPNPKTSGGARWNFLAAWAWARAANNGDDAKAQEYVAQLFKHVPVLDTGARGATTTFVQRGLGDVLLAWENEAYLSLEELGPDNFDIVTPSISIKAEPPVALVDGNVDSKGTRKVAEAYLDYLYSDVGQKIAAKHYYRPFKPELADPKDTARFTELKLVTIDDFGGWKEAQPKFFGDGGVFDQIYRPGQLast
1 -108.000IDP01383 thiosulfate ABC transporter, periplasmic thiosulfate-binding protein VC0538 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  42  1MNRIKSTLTALLLA-------GSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIKQSHAGSSAQARSILQGLAADVVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTAFLVRKGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYLAALGFAQKQFGQDNVQQDEFLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSILAEFPVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPAVELLTVEGIAGGWEQAMQTQFANGAKLDQLLRR.. 333
2 -53.800IDP92649 iron ABC transporter, iron-binding protein [Streptococcus pneumoniae TIGR4] SP_0243 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  16  1MKKKW---MYYAACSSNESADDSSSDKGDGGSLVVYS-PNSEGLIGATIPAFEEKY------GIKVELIQAGTGELFKKLEEVPVADVIFGGSYTQYTTHGKENDNVIKEYQNTTGYSTPYTLDGSVLIVNPDLTKGIEGYNDLFKPELKIATADPANSSSAFAQLTNMLQAQ---GGYKDDKAWSYVKDLFTLIDGKIGLSSSGVYKAVADGEMTVGLSYEDPAVKLLND--GANIKVVYPKEGTVFLPASA---AIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNPVRKNAKTSENMKPIDKIKTLTED----YDYVIKNKSDIVKKYNEVFTDIQ 335
3 -53.300IDP01937 putative periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0727 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  16  1MSKKFFLSLGLVALLFSNSQAIDEKAAQAEGRVNSLAMPDTWANWKDTWADLKNLY------DIEHSDTDMSSAQEIAKFKKNASGDIGDVGAS-FGEIAVKQGVAIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDPKTWQDLLKGNYKITVGDVSVAAQA-VSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLV---NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTT---IINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLPDDIKAKLLPSEQYK---DQKAWEKSAKELPQLWQEVIVDMK 348
4 -52.600IDP91956 ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005733 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  12  1MFKNFKKIAFTSSLILLAACSNNAGSVDKSQEIVIYT-NSASNGRADWLQTKASE------QGYNLRLVDISGGELADRLINNAVADMVIGLNKLEFNRIKAEKLLVDSSLGDSEGYYSPIVNQPLVLIGNKDAKM-PSDWTDFTDSSYKGKYGISKLSTGTSKNIFASIVSRYKDEKGESDEGWKVAKAYLKNAHVYAEGE--DYISSIMDNNNDLKYSMMWGSVLQNQKEREYKFQVMSPKVGVPYVTEQV---GILNTSKKQALLKEFVDWFGSSELQKEWSDKFGSPANKKALEQAKKQFANSVKPQELD----WEFIGKNIDSWIEKAQLEFVE.. 352
5 -52.100IDP05164 putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] BA_1735 [Bacillus anthracis str. Ames]  ali follow..  18  1MKKFSSLKSLFVCTLLFSAVVTGKSKTTNEKKIVVYS-AGPKGLAEKIQKDFEKK------TGIKVEMFQGTTGKILARMEKKPVVDVVVLASLPAMEGLKKDGQTLRSEWSDDKGHYFGYSASALGIVYNTKNVKTPEDWSDITKGEWKVNLPDPALSGSALDFVTGYVKKN--------KDGWDLFEQLKKNEVTVAGAN-QEALDPVVTGAKDMVIAGVDYMTYSAKA-KGEPVDIVYPKSGTVISPRAA---GIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTDIK-AENRPNVEEIPVLNID----WKTVEKEQDEIGKQFKKVFQ... 341
6 -51.900IDP04509 iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens ATCC 13124] CPF_0440 [Clostridium perfringens ATCC 13124]  ali follow..  12  4RKKLLALTLTALVSMGVLAGCGQEETGSGEKVVNVYS-SRHYDIDKQLFKDFESD------TGIKVNLVDGKSDELIERMADNTSADVFLTVGAENIAQLNEKDLIKDIPSEYRGKNWVGLTSRARIIVYNKENPETIKTYNDLTKDEFKGKVLTRSSSSSYNNALLSSFIQLDG-----AEKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIAKMISSSDGKEIGVLFPENTHLNLSFG----AVTKNAKNEENAVALLEYLTEEKAQKAYVDENGEALNTKVGKSELQKSWGEFTVQNLN----YEILGESKQEATLIFDQV..... 347
7 -51.500IDP00429 gene: sfuA; iron(III)-binding periplasmic protein YPO2958 [Yersinia pestis CO92]  ali follow..  9  1MKIPIPSIGHVALLASAILFASSANAASDEDGIIIYN-AQHESFAKSWAEGFTKD------TGIKVTLRNGKDSELGNQLISSSPADVFLTENSPAMVLVDNAKLFVAKEYRPEDGRWTGIAARSTVFVYNPAKISEPKSLMDLAKPEWKGRWAASPSGADFQAIVSAMLALK------GEQATLEWLKAMKTNATAY--KGNSTVMKAVNAGQIDGGVIYHYYPFQAKTGENSGNIKLHYFKNKDPGAFVSISGAGVLASSKHPQQAQKFVQWVTGKAGQDFLRESN-YAVGVNAASNPKLVPLKDLDPPKVEVSKLNSKKVVELMTEAGLL........ 339
8 -51.300IDP00471 gene: tbpA; thiamin transporter substrate binding subunit YPO0522 [Yersinia pestis CO92]  ali follow..  13  1MFKHIISCLLLISAT--------SALAAEKPTLTVYTYAADWGPGPAIKQAFEAE----CDCQLKFVALEDGVSLLNRLRMEGSQADVILGLDNNLVQAAEQTGLFTPSQVDWQNKTFVPYDYGYFAFVYNKEKLKNPKSLHELISSKEPVIYQDPRTSTPGLGLMLWMQKVY--------DQAPQAWQQLAQKTVTVTKGW-SEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAAADFSEGHYLQVEVA---GQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMPVIKMDLPAGFETLAVPQTALQFD----AKDVADNRSKWIQAWQSAVSR.. 330
9 -50.900IDP01388 iron(III) ABC transporter, periplasmic iron-compound-binding protein VC0608 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  8ITSQKEYSMKKLLSLSAITLSVLAPSAFAAQEVNVYS-YRQPFLIEPMFAEFTKE----TGIKVNVKFAKEGIAEKLAQEGEYSPADVILTSEFSRLFELTEKGLTIPAQYRDSGDEWFALTQRTRSVYSSRDRLGKDFDYMDLAKPEFKGKICTRSGKHPYNIALVASIIANHG-----EAEAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMLNDQEAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYAEVNYEPVKPGVQRSALVESWGEFKADSLP----LEKIADNNAAAIKLIDEV..... 348
10 -48.600IDP00164 gene: acfC; accessory colonization factor AcfC VC0841 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  1MYFMKSKNRFLLISLLSF-------STSVFADVNLYGPGGPHVPLIKVAESFEKSQ------SKRVNITFGPQATWNDKAKKNADILFGASEHSALAIAEGHSERFSKFNIH-------PVFMREAIILVKKGNPKNIKGMADLLKPGIGIVVNDGAGVSNTSGTAVWEDSVGRMKNVE-------KLQAFRSNIHVFAPNSGSARKAFVDGEDIDAWITWVDWAIANPTIGD----MVRMED-----EYRIYRDFNVVLAKNPSSEAIDFFDYLTSKDAEAIFQHYGW.................................................... 254
11 -47.800IDP05678 hypothetical protein lmo1041 [Listeria monocytogenes EGD-e] lmo1041 [Listeria monocytogenes EGD-e]  ali follow..  16  1MKKIVLIICCGLLLLLGAC--EDTPEKVQTTTIHISAAASLKDSIDDVKPLFEKANP-----TIKLSFDFGGSGQIRERVESGAPIDGVLLASKKDADTLIKQNLA---------EKTKEFAGNELVLIEPKNVDQKTEANLEQLLNDAKIAIGDPESVPAGAYAKQTLENLNLYNAEKAK---------------LVLATDVRQVLSYVEAGNADAGFVYQTDALLSKKVQ----VKAKIDEK---LHDPIAYYSAQVSDSDKKEETATFLDFMNKSEAQKILEKYGFKAAN................................................ 256
12 -46.800IDP01491 ABC transporter, periplasmic substrate-binding protein VCA0603 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  1MERMMNKRILKGTLTAIAALMSAH--AFAGQEVTVYT-AFETDLLAKYKSAFEKENP-----DIEIKWVRDSTGIMTAKLLDNPRAEVVWGLAGSSMALLKDQGVLKPYT-PQAQQAWYGNDAFFNAVCFNEAVAKQPQSWEDLTNPVYKIAMPNPASSGTGYMQVSAWLQNM------GEDKAWDYMQRLDQNIAHYTHSG-SKPCVQAGMGEVAIGISMATRGAKLKTQ--GAPLDVIVPNG-------IGWESEAVGLVKESDAAKRVVDWSVSKAANELYIESYPIVGHQDVSKQVPNYPNVEKVMAKMD----FTQMGVDRARVLQTWSEKFDA.. 333
13 -46.500IDP04512 gene: modA; molybdate ABC transporter, molybdate-binding protein [Clostridium perfringens ATCC 13124] CPF_2342 [Clostridium perfringens ATCC 13124]  ali follow..  14  1MRKKISLPIIMAIGMLSLLFVGCTNNKEEK-TLTVSIAASLQKPMEKIASNFEKENG------VKIQYNVGGSGTLKKQISDGADVDLFFSANTKYAKELIDEGLVNKDESYK-------ILNNQLVLIENNDYNKPINSLEDLKNVEGKIAIGEISTVPAGQYAKESLEKVGAYKDIEDK---------------LVFARSVTNVKTYVENGEANLGFVYKTDALDLKNSK----IVYEVPND---YHKPIEYELCLLKNSKNNKEAKKLIEYLKGEESKKIFSEYGF.................................................... 253
14 -46.300IDP05504 gene: modA; putative molybdenum ABC transporter,substrate-binding protein [Clostridium difficile 630] CD0869 [Peptoclostridium difficile 630]  ali follow..  12  1MKKILGILGLVACLTLGTVGCNSTTKSSDSVELNISAAASLKEAMAKIEEEYKKVDS-----NVKLTVNYGASGSLQQQIEQGAPCDLFISAGQKQMKVLDEEKLLVSDTMKD-------LVKNDLVLISSADS--SVSGMKDLTTDKVKIAVGEAESVPAGKYADEVLTNLNLKDKLKDK---------------LVFAKDVKEVLAWVQSGNADVGFVYFSDTVNNDKIK----VVEKTDEK---THSPITYPVSVIKASKNVDAAKKFEEFLLSESGQKIFEEFGYKKVE................................................ 270
15 -46.000IDP90995 hypothetical protein y1430 [Yersinia pestis KIM 10] y1430 [Yersinia pestis KIM10+]  ali follow..  12  9LMKIKVFMFAMAALTTLPAFAQLPDGAKKEGKVVVYS-ATDIKAAAPLIKGFEAAYPGIKVEYNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYAL--PKWAIWKNKAYGSTYEPVVFIYNKRLIPQPDTHIALAKDKFKVTTYDIEKSGLGFMLSVQDFK--------ADPNYFTTLANIAKGGLTV-QSSTGTMMERVSSGENLIGFNILGSYAETRAK-TDPSLGIAYPKDYTLV---LSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDISIRKDIDGNNDIDGLTKLRPIPVDELEYMEQAKRLDYIKQ--WRTAAAK.. 369
16 -42.400IDP04248 ABC transporter, substrate-binding protein [Clostridium perfringens ATCC 13124] CPF_1477 [Clostridium perfringens ATCC 13124]  ali follow..  13  1MKKKILATLLTLVLGTSLVGCGKTEGAEAGKKLVVSTWGLNEDVLKEVFEPFAKE----HGVEIVLDIGNNSERLTKMKNNPNSQIDITYLAES-FAEQGVEAGIFDKLDYSKEAGYGPAYTLNSIGIVVDPSAGIEINSWEDLWKPELKNKIAIPDITTTNGPAMVEIAAEKAGVDVKTDEAAFKELEALKPNVVKTYSKS-SDLANMFSNGEIVAAVASDFAFGTISKA--KPEVINVIPESGTYL----FNTININKNSKNKDLAYEFINYALSKEVQEKTAKANESPVNKEVKLSEEETK-VVDNAKVID----FKFVNSVMDQWVNNWNRIMN... 348
17 -41.700IDP91025 gene: modA; molybdate transporter periplasmic protein [Yersinia pestis KIM 10] y3037 [Yersinia pestis KIM10+]  ali follow..  13  5MKNQYGKVSYWVAGAVLLTAFS--GPAFAADKITVFAAASLTNALQDIAVQYKQE------KQVDVVASYASSSTLARQIEQGAPADLFISADQQWMDYAIDKQQIVANTRYT-------LLGNELVLIAPQDSQIDKVEIDKKTD---RLAVGDPDHVPAGIYAKESLENLGAWSTLAPE---------------MARANNVRSAMALVERAEAPLGIVYGSDAVASKKVK----VVGIFPEA---SHKPVEYPMAIVKGHDNPT-VTAFYDYLKSPAAAVIFKNYGFTP.................................................. 262
18 -40.200IDP01311 molybdenum ABC transporter, periplasmic molybdenum-binding protein VCA0726 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  1MPMLTRILLLLCVALN-------APLASAKETLHIYAASSMTNAVNALVADYSQQHD------VKLVTVYGGSSSLARQIEAGAPADLFISANEEWANYLVEKGLVKPNKVVT-------LAANSLVLIRPTAQPVASFELQDAAAWQTRLAVAQVDAVPAGMYAKQALQHAGVWPELESR---------------LAQTNNVRLALALVERGESPLGIVYKTDALLSDKVT----IVTAFSAQ---SHQPIRYPLAQLN---DKAASAEWVAYLRSDAAQQILQRFGFESVSE............................................... 254
19 -27.700IDP05020 gene: potD; spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile 630] CD1027 [Peptoclostridium difficile 630]  ali follow..  11  1MIKKKAISLIAVGMMIVTLFTGCNKATDSTKVLNVYNVGDYID--ESLIDKFEKE----TGIDVQYSTYDTNEMMYQKVKSGSTHYDLVFPSDYM-VEKMKNEGLLEKLDFKNIPNYSVAYMWGTLGILYNKKEVKDMDSWNILWNPKYNIMMFDSVRDTIG----ITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKDRLLGGEVAMGMLYSGDAVTLMEQ--NPDLDYAIPKEGTNK------AMCVPTTAQNKKEAELFINFLLDPENAKVNAEYGYSTPNTGALKLLDPEITQNPVAYPSKEVLDKCETFEDIGENIKLYDKAWIELK 348
20 -27.600IDP05035 gene: potD; spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Ames] BA_1300 [Bacillus anthracis str. Ames]  ali follow..  11  1MKLTKRLAGAAISFSLV------AGCGEKKEELNIYSWADNFD--EQVLRDFEKK----YNVKINYDKYASNEEMLAKLQAGGAKYDLIQPSDYM-VKTMAKMDLLAPLDKKNIPNYSLVYTWGVTGIAYNKKYVKEPTSWTDLWNEKYKGHVTLLNDSREVL---MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAAFIAKD--NKDVEYVVPKEGGTI------TLAIPKGAKNKELAEKFMNYLLDEKVSVKNYESGYSNPNEKAHPLHSKEYRENHMIFLTKEELDRTEWLVDVDDKLKDYDRYWTELK 341
21 -27.400IDP01395 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative VC0704 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  9  4FCNEWVSYSQMIKRFLSLMVLNTVCYQASALELNVYLWEDTIA--PSVVEAWHKK----TGVSVNLFHFDNDDERSLLMLKSVQLPDIMVLDNVEDLTALPNRANNDPMWLQACGTHAVPYFWGSVGIAYRKSLFDKPTQWSEVVDIA-RVGMLKDSVETLLP-ALYMLNASPITDSIDTLRQAYRLLDAANPHILTY-EYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDWDFSVPEGRPYL------CMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYRAASPNYKARALLPVEHREDLSIYLPEQRLAEGIIDSELSAKNSLRAKIISSVT 352
22 -26.700IDP91991 spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100001132 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  13  1MKKIYSIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID--PELLTQFTEE----TGIQVQYETFDSNEAMYTKIKQGGTTYDIAIPSE-YMINKMKDEDLLVPLDYSKIEGFSIPYFWGTLGIVYNETMVDEPEHWDDLWKLEYKNSIMLFDGAREVL---LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEASQMLEK--NENLRYVVPTEASNL------NMVIPKTVKNQDSAYAFINFMLKPENALQNAEYGYSTPNLPAKELLPEETKEDKAFYPDVETMKHLEVYEKF-KWTGKYSDLFLQFK 352
23 -26.600IDP01418 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein VC1424 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  1MKNKLFASALCAAALF------TTNAMAKDQELYFYNWSEYIP--SEVLEDFTKE----TGIKVIYSTYESNESMYAKLKTQGAGYDLVVPST-YFVSKMRKEGMLQEIDHSKLSHFSIPYIWGATGIGINTDMLDKLKNWGDLWDAKWAGQLM---MDDAREVFHIALSKLGYSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQE--GAPIQIIWPEKGTIF------SISIPAGAKNIEAAHKMIDFLLRPENAAKIALEGYPTPVKTAHDLLPKEFANDPSIYPPQSVIDNGEWQDEVGEASVLYDEYFQKLK 342
24 -26.100IDP04270 gene: potD; spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens ATCC 13124] CPF_2226 [Clostridium perfringens ATCC 13124]  ali follow..  11  3LKKFLALTCSTLLLSSLFLGCGEATQDKNNNVLYVYNWGDYID--PELLTKFKEE----TGIDVKYDVYDTNEIMYQKLNSGNVSYDIVIPSDYM-IEKMKEEDMLAKIDYSNIPNYSVPYMWGTVGIIYNTKRVSDVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQEAAKKELMTQKKDGLILA--MVDQVKDAMVGGEASLAVAWSGDAVTMIER--NPDLAYAIPKEGSNK-------IAIPKNAKHKENAEKFINFLCDPENAEQNVEYGYSTPNTAAYDLLPEDIRDDKVAYPDEESLKNCEVFIDLPSKLRKYDEAWLEIK 357
25 -25.900IDP05673 hypothetical protein lmo0810 [Listeria monocytogenes EGD-e] lmo0810 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKQLVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID--PSLITKFEKE----TGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYA-ISKMKEENLLIPLDHSKLPNYSMPYFWGTLGIIYNKEMFPDFDTWNALFDPELKNQILLIDGAREVM---LGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAEMLSE--NEDLEYVIPKDGSNL-------MVIPKTAKNVDGAHKFINFMLKPENAAINAEYGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVYDNL-RMLSYYNELFLEFK 353
26 -25.600IDP91988 phosphate-binding protein PstS 1 (PBP 1) [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007640 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  14  1MKKRKKLALSLIAFWLTACLVGCASWIDRGESITAVGSTALQPLVEVAADEFGTIHV-----GKTVNVQGGGSGTGLSQVQSG-AVDIGNSDVFAEEKDGIDASALVD----------HKVAVAGLALIVNKEVDGEVTNWKEVGGKDLPISVINRAAGSGSRATFD------------------TVIMEGQSAMQSQEQDSNGAVKSIVSKSPGAISYL---SLTYIDDSVKSMKLNGYDLSPENISS-PLWSYEHMYTLGQPNELAAEFLNFVLSDETQEIVKGLKYIPIKEMKVEKD......................................... 280
27 -25.500IDP91442 ABC-type phosphate transport system, periplasmic component [Vibrio vulnificus CMCP6] VV1_0466 [Vibrio vulnificus CMCP6]  ali follow..  11  1MKRWWLSLLLMGGISASAQALDTPKIPGVSGNLLSVGSDTLAGMTTLWVEEFKALYP-----NINAQVQASGSSTAPPALTEQ-TAQFGPMS-----RPMRLREVEAFERTHGYKPTALRVAIDAIGIFVHQDNPDFVSTWAQL--AKRNFQLFGRNSVSGTYGYFKKHA-----------------LCGGDFKSQVNEQPGSASVVQSVASTLSGIGVGYRVAGVRLLPIAKQGNEFVYPSRENILLSRYLYVYVNKHPSKALSPIEAEFIKFIYSAQGQALVEKDGYVSITEEFAKQE......................................... 311
28 -25.400IDP05439 hypothetical protein lmo2499 [Listeria monocytogenes EGD-e] lmo2499 [Listeria monocytogenes EGD-e]  ali follow..  14  1MKKKYLGIVAMLAAVMLVFAACGSDSSSASGSLTAVGSTALQPLVEAASKEFTNTNP-----KAQINVQGGGSGTGLTQVQQG-AVEIGNSDVFAEEKDGVDASKLVD----------HRVAVVGMAPVVNKDVG-KTTNWKDVGGKDEKITIINRAEGSGTRATFE------------------KWGLDGKTPIKAQEQDSSGTVRKIVSETPGAISYL---AFSYIDASVVGLSLDGVEPTEDKVAT-KIWSYEHMYTNGEPKGLTKTFLKYMTSDEVQNIVPQLGYQSIKSMKVERDASGKLTDVK................................ 302
29 -25.100IDP01506 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein VCA1113 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  9  1MKTFIKGLVLSAVVA--------SSQVYAEQTLNVYAWGGYLP--EKSLKAFEQQ----EGVTINYSTFENNESMYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNFSLPYIWGITGLYYNSSTLPNITKWADLWDKQYEQQVM---IDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVE--MPELKFVMPEEGAVL------NFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPELAIYEKYWQRLR 341
30 -24.800IDP04389 gene: pstS; phosphate ABC transporter, phosphate-binding protein [Clostridium perfringens ATCC 13124] CPF_0617 [Clostridium perfringens ATCC 13124]  ali follow..  14  1MFKKRLIAIIGTIFIGATAMVGGGSEAKSTNSVSISGSTSVGPVMEAEAEAFKTKKP-----DVSIEINQIGSSAGIKNAMEG-VSEIGMASRD------------LKGEEKQAGLKEVEIAYDGIALITHKNNPGKITNWKELGGNDAPIVVVSREDGSGTRDAFQEIVGF----------------KAEELTVNSQISDGSGNIKSLVQGNENAIGYI---SFSYVDDSVSAVKVDGVEATPENVLNKSYKVFLAVYKEENLTESGKSFIDFILSEEGQDIVAKEHLIKVK................................................ 276
31 -24.600IDP06544 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN09718 [Enterococcus faecium DO]  ali follow..  11  1MKKIIVTTCLLATGFLLTACGESQSSNESQQTTIQFVEQERLSVINELVADFEKENP-----DIKIKQVPVENTKIVTLARSGKLPEVMEVSQD-FAKVMDKDELIDQTAVQNVIEIAAPISGWVQGIWYDKEKLSEPENWDDILKIAQHFTIAMPTAEGTMSEQAFSQFALSNGANVLDDEEALSFYQNLSQYTMP-GSNDVTEIKDAFMNGTAPMAIYSTYILPSVYEAGNSENIGFAIPKDQAVYGTVSGLTISSGLDEKQKEAAEAFTAFLSQPKNMEKWSPGGAQPVNKQVVELDGYKENEVIKSF.............................. 364
32 -24.500IDP04390 gene: pstS; phosphate ABC transporter, phosphate-binding protein [Clostridium perfringens ATCC 13124] CPF_0618 [Clostridium perfringens ATCC 13124]  ali follow..  12  1MNRRRVVIALSSILAMGFLLTG-CGGGSRANIIKISGSSSVGPLVEAEAEVFKKEMP-----DITVEVNQLGSSAGIKDAING-TVEIGISSRD------------LKEKELESGIKEKPIAYDGMSVIINNENPGKITNWKEVGGEDTPIVLVSREDGSGTRDAFQEIVGF----------------NSEEISPQAQISDGSGSIKTMVAGNKNAIGYI---SFSYVDDSVHAVSIDGVKPTAENVQNKKYKLFLLVYKEENLNENSKKFIDFIMSKEGQEIVEEDGLISVT................................................ 272
33 -24.400IDP00421 gene: potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily YPO1331 [Yersinia pestis CO92]  ali follow..  10  1MFTQRKKWLSGVAAGLLMAASVSA--SAEEKILHIYNWSDYIA--PDTLANFQKE----TGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSA-SFLERQLSAGVFKPLDKSKLPNYAIPYLWATTGIGYNVEKVKAVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNSTLTADYTGSLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRKNGVNVAYSIPKEGALA------VFAMPTDAKNQDEAYQFLNYLMRPDVIANISNHFYANANQAATPLVNAEVRDNPGIYPPADVRAKMFTLKVQDPKDRVITRAWTKVK 366
34 -24.100IDP01419 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein VC1425 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  21.LTSMKKLATLLAGSACALSLLSGTAAAEDKELVFMNWGPYIN--SGILEQFTKE----TGIKVIYSTYESNETLYAKLKTHNQGYDLVVPST-YFVAKMRDEGMLQKIDKSKLSNYSIPHVVAITGLAVNTDMYDPFQSWGDLWKPELKGQLMLMDDTREVF---IALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKE--GLPIKLVFPKEGGIG------NFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDK----QDVAPLFPSQEDLDRVEWQSAVGDKTVKYEEYFMKLK 363
35 -23.400IDP05674 hypothetical protein lmo0859 [Listeria monocytogenes EGD-e] lmo0859 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKIRKIAIAALSVVVAGSLLTASKSDDNGKTKVTFWAAPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNFSDGNQYVLPVYSNPILFAWRLDTLKEPKTYSEALEVGKKLKAKYPDKVLAASKGNAFVEDGKLVADDKAGTELLTFMSELQKNKLLLASKATDP----FETGTSIMADNWDEKFPELKYNENYAITAPLVPDSMVNEENVATVVMYAQATDKEKEAAMDFLKFVYNDDKNDLLETTNLIPARDDATENETFTAF.................................... 374
36 -23.300IDP05708 hypothetical protein lmo2839 [Listeria monocytogenes EGD-e] lmo2839 [Listeria monocytogenes EGD-e]  ali follow..  14  1MKKKSLVLLVVVLVLSAVLACGGKESGSKEVTIEFMHSKERLDVINKLIADFEKENP-----TIKIKQIPVENTKVVTLARSGKLPAVMEVS--QDFAKVMDKDELIDQD-DGKSYIAAPLSGWVQGIWYNKKGFEEPKNWADIEKVAKKFTIAIPTAESTMSEQAFSQFALSNKANVLDAKEALQYYKDLSAYTMP-GSNDVTEIKDAFMNGTVPMAMYSTYILPSVYEEGDPKNIGFAIPEEKEKAVYGTVLTISAGLDDEQKKATKKFVEYLSQPENMATWSPGGAQPVNKEVVEQKAYKENEVIKSF.............................. 364
37 -23.300IDP04377 putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein [Clostridium perfringens ATCC 13124] CPF_2652 [Clostridium perfringens ATCC 13124]  ali follow..  9  1MGKRAATMLFAGSLVGCGGKSDSGSADGSGKELTVWSHTPEVEELNKMASKWGEENGVK----VKVVEDKSEMQAYIQAANSSKGPDIMFGLAHDNLGTFQKAGLLAEVP--DGKRYAVPIAQETSALFYNKDKVKEVKTMEDLVKVAEEGA---GFIAADGGYVY-TLDPTDIGLGTPGAIKGYQFVQDLVQKDKLMPADTGDIAKGDFLSKNTGFYISGPWDVSAFKDGGVNFGVAPMPTLFGKQVPTFLVQTAFVSEKSQNKDLAWKLVKYLSENSGDVLLNKGNRIPVLNKYLDSADFKNNEYMSAF.............................. 352
38 -22.700IDP02726 maltosaccharide ABC transporter, maltosaccharide-binding protein, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA4229 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  1MKKALSLLTVSALSIGMLSACGPKDSGKKEEDLLVWEDDKKGVGLEPAVKSFEEKYKVK--VKVVEMQMTDQVKKLRLDGPAGTGPDVVTLPHD-QIGNAVTEGLLSEVKADDAV-YGLPKAIETPVFIYNKK-PKAPETMDELFNFSKEFTKDGKYGFLALGDNFYFANAFMAGMGGSGAVQGAEYLQKWYKEKLFIGESGGPAADGLFNEGKAASIMNWAFQAMEKNGIDYGVAPMPKLPNGQPLKTFVGVKGWHVTSFSKQNDLATKFTEWVTNEENAKIRFEKKEIPPVKAVMEDPIIKDNEAAKAV.............................. 359
39 -22.100IDP91126 extracellular solute-binding protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00176 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  10  1MSKILKCITLAVVMLLIVTACGPNRSKEDIDQLTMWVDGDKQAFYKKITDQYTKK----TGIKVKLVNIGQNDENISLDAPAGKGPDIFFLAHD-NTGSAYLQGLAAEIK--DNKQLALPAIVETTALFYNKK-KNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDHVVKNAERLQKWYDKGYLPKAATHDVMIGLFKEGKVGQFVTGPWNINEYQETFGKDLGVTTLPTDGGKPMKPFLGVRGLSEYSKHKYWAKDLMLYITSKDTLQKYTDESEITGRVDVKSSNP........................................ 354
40 -21.900IDP05761 hypothetical protein lmo2125 [Listeria monocytogenes EGD-e] lmo2125 [Listeria monocytogenes EGD-e]  ali follow..  13  1MKRFKKVGIVSAVLVMALSLAASKSGSSDEKTLTVSVDAGYKDYVNKIKGDFEKD----NDVKVKVVEKDMFEEALPLDGPAGTAPDVMMSAFD-RIGSLGQQGHLAEVKLGNKDDYGAPAIIETLVLYYNKD-DKAPATFKDLETLSKDSRFAFTSGYGGYVFGDEGTNPKDIGLNNKGSVEGITYATKWFQDVWPKNKSADDFIQDQFVKGKAAAILGWSAANYKEAKINYGVAKIPTLNNGKEYSPFAGGKGWVVSNYSKNKDVAQKWLDYVTNQKNQETLYDMNEVPANLKARDTAKSKNDELTNAV.............................. 361
41 -21.800IDP06507 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN11122 [Enterococcus faecium DO]  ali follow..  13  1MKKNSRIVMMGVALVSGLVLAGGNGSASNSDKVELSINYYNGAISKKAMDNAKKEFSDYKLSFKQIPANDDFDTKLKASLNSKSAPDITAI-NSNISDYLPYADKFVNLLDYDSETLAADFVIGPTALFYNVDAFAKLKDEESLMAAAKQMKEKADMPFFQSSLSLLQSKNRTMTEHIYDENEIWDYAVKAEKSGYTLGTKGSADGANSVQKGMFGGMISWGINDLAENGVSPKQWMIAKSPFTASNYG---GSYLAVIKTSSHPKEAAEVVKYLTNEDSQANYEELALFPSNTKVYDDSFKAAKNE.................................. 353
42 -21.600IDP05433 hypothetical protein lmo1730 [Listeria monocytogenes EGD-e] lmo1730 [Listeria monocytogenes EGD-e]  ali follow..  13  1MKKKMFVVLALVLSLSLVLMACGGSKDDANSVLNVWAMGDEAKSLKELAQKFTKD------TGIEVKVQVIPHDKLLTAVASKSGPDVVQM-GTTWMPEFVEAGALLDIT--DGKTYGVPWYAETRVLFYRTGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPVDTVTYLDSFIKNGSAPDTDGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWVLPKKENNESSLGGANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLKTNSMPARMDAWEDDMLKNDPYYKVFPMPLIPQFEEIAQLY---GKSWEQIYRGGA 395
43 -21.000IDP02597 putative sugar binding protein [Yersinia pestis CO92] YPO3472 [Yersinia pestis CO92]  ali follow..  13  1MKTQMIMSKVKIKSLLLLTYLAMGIPSLHAAETLQVASNDSKNIYKKEADTFEKK------TGIKIEYFNATTQRLARAAAGNALPDLIFN-DAVAIGQFVQLGIVEPIEYIDGKYYGVPTSAQTFALFVRKDGLEQPKNWQDISTLAKAFTFNDPDGNGKNDTYGFILPGSTTRGEEPAATETLSFMRGMVCDKTVAINATTADAIPSFRSGQSGMFFSGPYHIALFDKDPGTEAFEVIPPPTGPKGQATLA--VFMMKSSQKKAAAQKFIEFMISPEGQQIGMGTKNMPVVRLS............................................. 356
44 -20.900IDP02207 putative sugar binding protein [Yersinia pestis CO92] YPO0612 [Yersinia pestis CO92]  ali follow..  10  1.........MKILYYIAIAIASLPLMAAERLEIMVPSGSYVSFMRNTVTPEFNKLYPE-------VNLVVSNDEQLDTRMAAGDNPNVYIGVFGYQPAKLAKLGKLAYLDENFGRTYYIPWNATTQMMIYNKE-ERPPATWDEFLLAAEKISALPPRSDGSKVYGTVFWNDVLSFGSDRPDANMAQFMRTMQQAQRFAPLTMEKS----FFSRNIGMWLQFGFGWKATLSSAAERPMVVPIPVQTKGDIHYSVLIMIFKDEARKEQLSWALLNLLMRDDINLQANIAGQLPTLKALQDAP......................................... 348
45 -20.500IDP95187 gene: lmo0181; lmo0181 [Listeria monocytogenes EGD-e] CAC98396 [Listeria monocytogenes EGD-e]  ali follow..  13  1MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADALDEMVKEFEKQNP-----DIKVNVQTIAFTKLQTQIAGGDAPDAFELNYETFMQYAEKGVLADLTSYIEKDKYGMVESFSNVVTIYNKDLPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNEFYKVAAQNGGSNVEALTHLTNEVTDSKVAPSPSGQLPEDLFMNGQ--IAMLHTGIWLFDMFQDAPFKWDVQEAGNTQKATHFFANGIGVSKDSDKKEAAFKFASFMSANEEAAKIDNNWELPATENKEILQ......................................... 349
46 -20.300IDP05444 hypothetical protein lmo0768 [Listeria monocytogenes EGD-e] lmo0768 [Listeria monocytogenes EGD-e]  ali follow..  9  1MKKVLLAILSMVLLLSLAACGGSSDSSKDKNGKEEIVMGDQIKQLEKQIDSYNKSQDKYK---VKYVMQENVEEKLLTGIAGGELPDIIMW-DRYQTALYAPKGVLEPLD--SDKLYGLPLLNDNRILFYNKKLLQEPTTWDELATAAQKTTKWDGNKMTQAGGELVTSDNKETAFNSEQGLEVLNYWDKMQNDLKV-YQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGVVEPPPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVAKISGWLPANKIAAEDEYFTKDPNYSVFIRPTVAGYADVEGLAMKP--QFEKFMNGNI 394
47 -20.100IDP01500 gene: malE; maltose ABC transporter periplasmic protein VCA0945 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  10.KDMNMKNALSTVALSTLVALGSFGAHAAIEEGQLTIWINGDKGYNGLAEVGKKFEAD-TGIKVTVAHPDALQDKFPQTAATGDGPDIVFWAHD-RFGGYAEAGLLVEIK--NGKIIGYPIAVESLSLIYNKDLVPNPKSWEEVAELDAKLKKEGKSAIMWNLKEPYFTWPLMAADNNKGVKDAMNFVKGLVDKGVISPDMDYSVSESAFNQGNTAMTIN----SWGNIEKSGINYGVTTLPKFNGQASKPFV--AGISTASPNKDLAVEFIENYLLTNDGRMVNNDKPLGAVALNSFQRELDADARIAAT.............................. 356
48 -20.100IDP05525 putative sugar transporter, substrate-binding lipoprotein [Clostridium difficile 630] CD2550 [Peptoclostridium difficile 630]  ali follow..  13  9LKKLCSLAMVAIMTTTLITGCSSGNGKDSKKKLVLWMPNNMKEVWDPILDKFEEK------NNCEVDLQIIPSEKFATAISAGEGPDVGYMYAEMYPQFIESGAVEDLTNYATKEDKEQSIYANPGVLYYNKDILEKPKTWEDFKRICKKATQDTDGDGKIDQWGLAQGWGAKTFGNDKSGLEAAKFLKELQAYVPELSKDSNEMIESVFGPGKAAFTIMLSSAATSVFDESFPD--FVTGLEDKKAATFGAVDHLSLMSSAKNKELAYKLIQHMLSVESMTEFHKAPRAPITKGE............................................. 364
49 -19.900IDP04242 sugar ABC transporter, sugar-binding protein [Clostridium perfringens ATCC 13124] CPF_1113 [Clostridium perfringens ATCC 13124]  ali follow..  8  1MRKKILSAILCMMIGATAMVGCGDKTDSTQAKLRMTNWNN-EDTMKDMLKYLSEKLPNVE-IEYQFIDNSNYNTIVDTQLSAEEGPDIICESPASALKHAKLGYLENVNDLAKKYSYALPGISWFEGIYYNEKNIQIPKTFDEYIEKKFQSLGIKPLAAGLKWEPLLKNSMAFVTAEYLSTDAGKNFGQEYREGKVKLDGTDHDQALEEFATGKAAMYCSGPWDLEAIMSKNPDLKLNMMTKPSDGWLIGGPGCGFAVNSKSKNKDAAMEVLKAISTEEGQKALWE....................................................... 339
50 -19.600IDP06519 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN09962 [Enterococcus faecium DO]  ali follow..  8  1MKKRYKLVIALLNITLLFSLSACGKTNEEVTTLEVYVANGKTNYVENAAKIYNRKTGANIDLKIVVASGTATVQMITPKLVTHEDMDIISMADTSAAGVLEKFQNILRQQTSNETIIPWASDFTPALCYYQPKDFEEISSWEEYIQVAKALKIALPESGDQELFINMLAQQNQSLLDEEGNKHAAKLIKEMIDSDIVHFYGAQDAE---KAFQESAMFVAMSLNFPDASDKWRMAPLIPFSKENPGKGAVSGGSSFYVPKDAKNPQVAQQFLTFMLTDEECANALELGVATSNSLAYQTEAAEKKFD.................................. 373
51 -19.300IDP01422 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein VC1549 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  1MNK-----VWLTGLLTATASGVFSASTLAATEITWWHAGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQ--TGKMVGMPFNSSTPVLYYNKDMLASPQTYEQLEQVAAKLAEKGQAGFAQSLTPWIMFENFKSRHNSDDMLMHVKKLKEWSDKGYYKYYGSDDANQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIG--HTPAQDKGVAAFFAYLTKPETQMNWHKTGYVPVTNAAYDLTKQSGY.................................... 360
52 -19.000IDP92716 sugar ABC transporter substrate-binding protein [Streptococcus pneumoniae D39] YP_817037 [Streptococcus pneumoniae D39]  ali follow..  10  1MRKGTMLSVVAGLSLAILAGCSGGTNSKQASDIKVWVQTNEGKAWQKVVDNFNQSGKSKYKVVTEYIPRSGSGGKVNAAITTNSLPDVITL-DGPNTAAYAKSKVITPLD--NGKFYAFGFSESNVGVYYNKKTLEKPWTWDEFNTIAKKLKDHYNKPSNNGSVVNEDGTKAEGYFNSKESVEAVQFIQNLVKEGYT----TVSPVEKGFETGEYPMLLSGSWTIADMNTNYKDIDFGILPSKTKKLVSPSGSWQLAVTTKSDKKEAASEFVKFATNTESSEIISLGSVLPIRKSTIENIKDKVSEPMRFLMEQNSKAYPQVSRAF---QQAMQDISYYEE 412
53 -18.600IDP91953 extracellular solute-binding lipoprotein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002215 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  12  1MKFRKLACTVLASAAVLGLAACGNSGGSKDAEITWWAFDGVGTYEKSIIEAFEKANP-----DVKVKLETIDPEKITTAIEAGTAPDVLFDAPG-RIIQYGKNGKLAELN--GDKAYMYPISSAPFYMAMNKK-VKEGWTTDDFEKVLKALKDKGYTPGSLFSSSVTDEKVSKYTTDDPKFVKGLEKATGWIKDNLLNNGSDGGADIQNFANGQTSYTILWAPAQNGIQAKLLEAS-EVPFPSKPALEYLVNGFAVFNNKDDKKVAASKKFIQFIADDKGPKDVVRTGAFPVRTSFGKLDGFAEMRTLWFPMLQSVSNGDEKPADALKATEKANETIKKAM 440
54 -18.600IDP06508 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN10305 [Enterococcus faecium DO]  ali follow..  9  1MKGKKWLIGSLLVAATGILGACGGGSSAESDTLTFWNGASDGEILQEIVNEFNKTNDKNIKIEMDIMTWANLNEKLPTAISSKKAPDFIAL-NYPDFAQYVENGAVQPLD--EGKQYFVPMQVQGMYMYWNND-EQPPTTWEELTEMAPKLTDSSKNVSGFVF-KLVNDDYTKSEFASPENLKTLKAIQKMIHVDKTGPESSGAEMDNLMNAGQ--LAIEINGPWLNNGLKANEIDYNVTLPDKKTAILDGVGYAIPASTDNNKKEAVYEFLKYWNTTEIGKKWSIEGFPAYLDSVAKDEEVKNDPIVSEL.............................. 368
55 -18.300IDP06546 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN09092 [Enterococcus faecium DO]  ali follow..  13  1MNIRKLIAGVVCLAAASGFLTGASSTADKEEKVTVWAWDENIKAVNEAKKVYENEETE---IEVVTMSQDDIVQKLNTALASGNTENIVLIEDYANLSAIVKEDHFAPYKFAVNKVGDKIYGSGVTANFYRTD-DMENLKWDEYIQVARDVKEKTGKKIAEVNPSDLGRVRMIMQQAGESLKYGLELFATLLKEDLVEQTSDWNAGVTAIQSGAVASSPAWYSSTIQGAENQSGKWKIAPIPAQKAQASNLGGAGWYVIKGVAGEDSAKDFLEATFASNEETLAKEIGLVSTMLSANEQEAYQEASE.................................. 364
56 -18.000IDP04058 ABC transporter, solute-binding protein [Clostridium perfringens ATCC 13124] CPF_0556 [Clostridium perfringens ATCC 13124]  ali follow..  11  5LVKMLTVACVTAIAASAFVGCGNKEEAPKDNEIAVFEGGFGKDYWDACIDAFEAEHP---DVEVKMEANPKIGDIIRPKLSSENTPDFIYLDQSGIANALIKDKALVDLSYGDGKVFLAPLYYNVTGMWYNKALFKEPKTWDEFFEKKAKDEGIALYTYQGQAPGYNEAVIFPMLASAAGEEKALDVFQRMADEDMVTVGMTHTQAQVEFLNGKALFLPSWLEGEMKDAIPEGFEFGFMAPPEGDTPYVTTTIEQMYIPAKSDQVELAKEFLAFQYTDAMVQKNAE....................................................... 372
57 -17.800IDP05694 hypothetical protein lmo2007 [Listeria monocytogenes EGD-e] lmo2007 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKKWGVIIASLCLLLGLSACGSDEKADANETLKWYMIGTPQKDTEEVMKEVNKYTEEKIGVKVEMTQIDWGDKRMQTVINSGENFDIAYSAAGEFVSYSQKGAFLPLNKYLDKEG-SNKEVGEQQVYVFNKNDVTKVKNFSDLEPMLKTIKENEPSITPIGGNKDFKPAKIVNFYEQPETLDILKSLHSFYQKGYVTKDIATSTDPWSYDKENWFVRIEKYQPYAENIWDKNTGGKYKVVETPIIKNNSVTGAIQAVSVTSQHPEEAVKFLDLLNTDEYLRNLVDKGI.................................................... 353
58 -14.600IDP01699 extracellular solute-binding protein [Yersinia pestis CO92] YPO3343 [Yersinia pestis CO92]  ali follow..  13  3MKKLSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPL------AFHDKQGQLIGYDVDMANAFGEDLKLKVNFVSTSWPTLSDDLAADKFDIAMG-GVTATPGREAQFALSHAVVKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGT-------------------------NQSFVDANIKQAQIIRTKDNVANLQGIRNKSADIMFTDLIEGDYYQSKEPGVFCVATPEVLAGTGSY-----KVYMMAKDNQPLLEEVNQWLAGKTKTLLAQKW...................................................... 252
59 -14.300IDP92625 ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] SpneCMD_010100009638 [Streptococcus pneumoniae str. Canada MDR_19F]  ali follow..  10  1MKNWKKYAFASASVVALAAGLAACGNLTGNSVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDKKMSVITSSGENYDIAFADN---YIVNAQKGAYAD-KGNTVNGKIYAVVASSQNFAFNGTDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETDYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGP.................................................... 356
60 -14.100IDP05398 putative phosphonate ABC transporter, phosphonate-binding protein [Bacillus anthracis str. Ames] BA_3750 [Bacillus anthracis str. Ames]  ali follow..  13  1MLKKFFAMSTTVVLAAGLLSGCGTKESSANKNVPSQNADTLEAKAKPLEKLLSDK------LNIPVKVSISTNYNTIVEAMASKQVDVGFLPPTAYVLAHEKKAANVGVDDETGAPKKDLVDFYKSEFVVKKDS--NINSVKDL--KGKKIGYQDVTSSAGYVWPAAVLLKEGV---------------DPLKDVKPVTLKGHDQSLIALLNGDVDAAVVFQDARNIVKKDYPNIFDQTKIVKFTEKIPNDTISVRSDLDEEWSKKLQDAFIEIGKNEEGHKIIKEEGYVKSDDS.............................................. 297
61 -14.000IDP05245 hypothetical protein lmo2349 [Listeria monocytogenes EGD-e] lmo2349 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNV--CFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINE----------------------EQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSANAKVYFMLGKDETKLSKKVDEALQSIIDDGTKKLSEKWLGADYSKE.............................................................. 267
62 -13.800IDP91961 ABC transporter substrate-binding protein - amino acid transport [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005438 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  10  1MKKIVKYSSLAALGLVAAGVLAACSGGASKKEIIVATNGSPRPF------IYEEN-GELTGYEIEVVRAIFKDSDKYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAEKYLYAAPIAQNPNVLVVKKDD-SSIKSLDDIGGKSTEVVQATTSAKQLEAYNAE---------------------HTDNPTILNYTKADFQQIMVRLSDGQFDYKIFDKIGVETVIKNQGLDNLKVI-QGQDELKSFVDKRIKELYKDGTLEKLSKQFFGDTYLPAEADI.......................................................... 275
63 -13.800IDP04329 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1466 [Clostridium perfringens ATCC 13124]  ali follow..  7  4NKKLIALLLGGIIGTSSILAGCGSGGSASSSNLVWYVIGKPQNDGELVEEEVNKYIKDKINATVDIKHIDFGDQKMNVIANSGEEYDLAFTCSAFPYLDNARKGAFLELN--DLIDSHGKDLKNVIMWVFDKEPYQDIHSVDDLEPWLALIKEKEPDFVPFYTQGDGIPITVKNMYETEELKHLFTKLREFYEKGYIAAVSNMKNEVKRFVWKADGQ-----YAENGWSQSLGREVVTSSIVSSYVTNASTTGAMTAISATSKHPEKAMELINLVNKDSTLRNLLMFGI.................................................... 353
64 -13.800IDP04240 extracellular solute-binding protein [Clostridium perfringens ATCC 13124] CPF_1077 [Clostridium perfringens ATCC 13124]  ali follow..  9  1MIKRILSGIVCSSLILTGCGNSKEEESKETVNLTWYVIGDEPADNDIVEEEVNKYLKDKINATVDIKHIPFGDKKMSVISNSGEPYDLAFTCSAFPYLEYARKGAFLE-KGAEIDGKIYAVIALAPMWVFDKEPYENIHSVNDLEPWLKLVKEKEPDFIPLGIFYNDKNLTVTNKFESKEMKDMLLKLREYYEAGYIAAVTDMKPEVKRFVWKADGQ-----YAENIWGKSLGREVVTSSIIPPYITNNSTTGAMTAISANSKHPKKAMELLTLVNTDTNLRNLLMFGI.................................................... 347
65 -13.600IDP04378 extracellular solute-binding protein [Clostridium perfringens ATCC 13124] CPF_2335 [Clostridium perfringens ATCC 13124]  ali follow..  10  4FKKLIALTACAMLTTSVALTGCGADKTANAGKLTWYTIGQTPKDLDMVQEKANEYLKEKINATIDMKFIDYGDQKMGVIINSGEPYDLAFTCSANPYLENARKGAFLEID--ELLETKGKEMKSVIMWVFTKEPYQDIHTLEDLEPWLKVIHENEPDVTPLYITKGFSAPKIKNMFETDKMKSELETLQKYYDAGYISATAKDDKAVKRFVTKADGQ-----YADGLWSKDLGYEVVSSPIMDTHITNGSTTGSMIAISKTSEHPEKAMEFLNLLNTDVYLRNLLNYGI.................................................... 350
66 -13.600IDP05685 gene: opuCC; hypothetical protein lmo1426 [Listeria monocytogenes EGD-e] lmo1426 [Listeria monocytogenes EGD-e]  ali follow..  11  1MKKKFIALFSVLLLTSSLFLSSPGLGGSSKDTIRIGAMATTESQI--VSNILKELIEHDTGLKVEIVNNLGSTIVQHQAMLNG-DVDITAEEAIKDPEKALAAVKKGFEERFHQTWFDSYGFANTYVFMVRQDTAKNLNTVSDMRKVENELTAGVDN------------------SWMEREGDGYKAFSKAYDEFKKIFPMQIGLIYTALKNNQMDVALGYSTDGRIPTYN-----LKLLKDDKKFFPPYDASALATDEILKKHPELKTTI------NKLKGKISTEEMQKLNYEADGKLKEP----------------SIVAQEFLQKNNYFEG...... 306
67 -13.600IDP05622 ABC transporter, substrate-binding lipoprotein [Clostridium difficile 630] CD0999 [Peptoclostridium difficile 630]  ali follow..  9  1MKKYISIILLVVLTMVVLVGCSPGKDNPKNKQVKVAVPDGLPAV--AIAKLANENPEIKEGYETVYSI-EKTPEAISTRVMKK-DADIAIVPSNMAAIAYNKTSSYN-----------GTVGMGSLYLVSTEN----IKDYSDLVGKEVGC-------TGKGLTPDITIKSLLLQKDINYS------------DIKFNYVSSASELVPLLATGKVKTGIVPEPALSALMSKNPDIKIIKSLNDSWKEVSPQSTLIVKSEFLRDNKDFVDSFVDWANKEELGAYSEKI...................................................... 272
68 -13.600IDP05042 putative sulfonate ABC transporter, sulfonate-binding protein [Bacillus anthracis str. Ames] BA_2921 [Bacillus anthracis str. Ames]  ali follow..  14  1MYKKFKVLSFTLAISLFLFGCEKSTASSKKEDVTVIQQGLSPLLLAQKKGWFEEEFKKE---GVKVKWTEFQSGPPYFEAIASNRLDFGEVGNSPVISAQAAGIGFTEIANTSYAR-------KGTGILVQKD--SKITSIKELKGKKIAVAKGS-----SAFNLLYRALDK----------------EGINAKDVNVIQLQPDEAQPAFESGSVDAWAIWDPFISLHTVNKGA---KVITDGERLNVSSPEFLIARTKFAKEHPELVEKFLKVYEKDEAIKIYTS....................................................... 262
69 -13.500IDP05024 ABC transporter, substrate-binding protein, putative [Bacillus anthracis str. Sterne] BAS4675 [Bacillus anthracis str. Sterne]  ali follow..  10  1........MLLAVFTFAACSSKKEGTKEQTQNIRI-GEVTHSLFYAPLYVGIEKGFFKDEGLNVDLQTTAGGD-KTMTALLSG-GIDIALVGSETSIYVHQQGAKD------PIINFAQLTQTDGTFLVSRKK--LDSFNWNDVKGVTFLG-------QRKGGMPQMVGEYVLKKNGIDPH-----------KDTNLIQNIEFANIANAYASGTGEFVQLFEPTASIFEKEGKGYIVASFGNESGTVPYTSFMAKESFLK--KDKAAAEKFTQWVDTHSPEEIAVSPLFKDTSKDITEKVKQHSYATNPLLDAEEWKQLKEVPHEALVNTKIAESVIKK.. 325
70 -13.300IDP91962 amino acid ABC transporter, amino acid-binding protein, putative [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007760 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  12  1MKKFSLLLAILPFLVACG-NQATPKETSAQKTIVLATAGDVPPF------DYEDK-GNLTGFDIEVLKAVDEKLSDYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAEKYLYSLPISNNPLVLVSNKKN--PLTSLDQIAGKTTQEDTGTSNAQFINNWNQK---------------------HTDNPATINFSGEDIGKRILDLANGEFDFLVFDKVSVQKIIKDRGLDLSVVDLPDQKEFKEQFDKALKELYQDGTLEKLSNTYLGGSYLPDQSQL.......................................................... 265
71 -12.900IDP91970 lipoprotein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005433 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  10  3IKKWLGLVALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVKKD---GITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIADTYISPIRLYSGLNGS------ANKYTKVEDI-PANGEIAVPNDATNESRALYLLQSAGLIKLDVSGTALAT---VANIKENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEA-----DYKKALFKEQADENSKQWYNIIVAKKDWETSPDAIKKVIAAYHTDDVKKVIEE....................................................... 274
72 -12.800IDP05119 ABC transporter, substrate-binding protein [Clostridium difficile 630] CD2989 [Peptoclostridium difficile 630]  ali follow..  9  3LKKLLIGITILTLATASLAGCAKKNNGEKLSEINLTYVKSPLNVPSIIQKQFGKEFKKD---NIKVNFHEITTGPEQTQALAAGEIDFLHALGGTSALIAASNGVELK----------TYSRSPKGFMILTNNN--SIKSAADLVGKKV--------AGPKGTILHQVLISALDKEG-------------LSMDDVEFVNMGIPEASAALSDGSVDAALIAGPAALKAMKSGSK-----LVANGEGLVDGIIVTAVSTDFAEKHPEIVERFMEYVNNDEAMEKVAKEVDLSTKELYAWYDFSLDITDKDISSLEDTQDF--IKNKLQEKKVNIKELIYNAK 319
73 -12.600IDP04366 amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] CPF_1531 [Clostridium perfringens ATCC 13124]  ali follow..  12  1MKKLLFLLISIVILSILISGCSSKKIETKDSNTVIIGIDDTFVPMG-----FKNEKGDIVGFDVDLSKEAFKRMNLKVIFQPIDWSMKETELTNGNIDLIWN-GYTMTHEREKKVAFTNSYLKNRQVIVTLSNS--NINTLNDLKGKTVTTQDGSSSLDTLFERPKLT---------------------KSFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEILAQYYIFKNDPSKFHVLTEDLGEE-----SYSIGLRKNSNLIDHLNKTLEDMKEDGTIAKISNKWF.................................................... 256
74 -12.600IDP05563 hypothetical protein lmo2417 [Listeria monocytogenes EGD-e] lmo2417 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKVLGLIFTLSLVLVLTACGGSSDKASSSKDDKQLVVGASNTPHAQILEQAKPILKDK---GIDLKIVKYTDYVMPNKALEEGDLDANYFQHKPYLELEEKEKGYKFADVGAIHIEPMGIYS------------KKVKDIKDLKDGAQVLLSNSKSDWPRVIGIFVDNGLLTLKDGVKPQDATFDDIKDNPKNLKFKYDFDPAYLMTAYNNEEGDVVAINSNFVVDQGLNPSKDAIAI------ESKDSPYANIVVTTEKKKDDKNITELVKVLHSKEIQDYITK....................................................... 265
75 -12.200IDP05370 putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] BA_5220 [Bacillus anthracis str. Ames]  ali follow..  11  1MKKLLLTALISTSIFGLA---ACGGKDNDEKKLVVASNVPHAEILEKAKPLLEKK-------GIELEVKKFQDYVLPNKSLADKDLDANYFQHIPYLEKEIKDKKYEFEVAGKIHLEPIGVYS------------QKYKSLKELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFKTDIEPGLLPQVYNNKEGDAVLINSNYAIDTKLNPEKDAIAI------ESNDSPYANVVAVRKGDKDKKEIKELVEVLHSKEIEDFINK....................................................... 259
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.