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Query: [V] COG2602 Beta-lactamase class D, from VFDB

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKWIYVVLVLSIAGIGGFSVHAASSAHEKHLNVSKMNVDDEFKDTDGTFILHDLQKDQTFVYNRKRANQRQTPQSTFKVVNALIGLQVKAVRDEYDVKRWDGVKREFESWNRDHTLGSAMRESAIWYYQALARDIGEERMKTWLHTLSYGNEDISGGIDQFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGDHYTLYGKTGTRLTDMGLGWFVGFIKTEHGSYVFVTNVDDSGTKAKNITVDILKKYGLITSLast
1 -85.300IDP02180 putative periplasmic beta-lactamase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0299 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  30  1MKKITLFLLFLNLVFGQDKILNNWFKE----------------YNTSGTFVFYDGKTW--ASNDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFHYRGEKVFLSSWAQDMNLSSAIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISK-IDTFWLDNSLKISAKEQAILLFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFND-EQKIAWIVGFVYLKDENKAFALNLDEDLYKREKILEKYLDELVKKVK 254
2 -44.700IDP01251 penicillin-binding protein BA_4606 [Bacillus anthracis str. Ames]  ali follow..  14  244............................HNELQKKAEEVVEASEIKKGGLVLLDVKKNEILAMVSNQMLTPHFPGSVFKTIVAAAALDQNENVFNRTFNCNKDLEDHPKVMMGTLSFKESFARSCNRTFSELGNELIQKDLETYVAALGGADNSKKAVAQTAIGQKDVRMSPLAIANMMATIARGGKQLSYETVKTLQQLLRSVVTTPLSVAGKSGTAQTTKENRWFAGYFPYENPRYALVVVDVENVNAVTPIFKAIVESI..... 577
3 -43.700IDP00860 putative penicillin-binding protein STM1910 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  268.......AVLVEDPHDGSVLAMVSMPSYDPNPFVKGISYQDY----------GKLLHDKNLPLINRVTQGLYPPASTVKPYMAMSALLCGIITPQTTFFGAPTYRDWKKTGHGMLDVTKAIEESADTFFYQVAYMMGIDRIDTMLSQFGYGKWYQGDTISVGIGQGYWIATPIQMVKAMVALINNGADPASPYWGLVRQAMYGMANAPYGIAAKSGTSQVLRDHVFYTAFAPYKNPKVAIALILENGGVTAAPIMRKILDHL..... 609
4 -43.500IDP00417 gene: pbpA; penicillin-binding protein 2 YPO2604 [Yersinia pestis CO92]  ali follow..  18  273.......AVVVTDPRTGGILALVSNPSYDPNLFVDGISNKD----------YQGLLNDTNRPLINRATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWYRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSSWMSKFGYGEWYQGDTIPVGIGQGYWTATPIQMAKSLMTLINDGGSINSGYWEIAKDGMYGVANRPYKAAAKSGTAQVLRDHKLMVAFAPYENPTVSVAIILENGGPAVGTITRQILDHI..... 609
5 -43.300IDP00320 gene: pbpA; penicillin-binding protein 2 CBU_0550 [Coxiella burnetii RSA 493]  ali follow..  18  269.......AIVAIQPSTGQVLALVTKPSFDPNPFVSGLSQQD----------YQKLVNSPQHPLYNRAIRGQFASGSTVKPFLALFGLDMGIITPQYRIYDPGWYHDWRERGHGWVNVVKAIAVSCDVYFYNLAVALGIKRMDDILQRFGFGQWYTGDTIEAGIGQGFFLVTPLQLAQATATLAEHGFLKNPDNWDIVIHAMQEVVDKGFTVAAKTGTAQVLRNNHLFIAFAPVENPQIAVAVVVEHSAKMAGEIINYYFKHQ..... 610
6 -43.000IDP92559 Chain A, Structure Of Semet Penicillin Binding Protein 2a From Methicillin Resistant Staphylococcus Aureus Strain 27r (Trigonal Form) At 2.45 A Resolution. 1MWR_A [Staphylococcus aureus]  ali follow..  19  311...................................QKSIYNNXKNDYGSGTAIHPQTGELLALVSNKFQITTSPGSTQKILTAXIGLNNKTLDDKTSYKIDGKGWQKDKSWNGNIDLKQAIESSDNIFFARVALELGSKKFEKGXKKLGVGEDIPSD--DSGYGQGEILINPVQILSIYSALENNGNIISKENINLLTDGXQQVVNKTANLIGKSGTAELGRQIGWFISYDK-DNPNXXXAINVKDVQSYNAKISGKVYDEL..... 634
7 -42.900IDP00345 hypothetical protein lmo0441 lmo0441 [Listeria monocytogenes EGD-e]  ali follow..  16  366.......AVTMINPTNGELLALVSTPSYDANQMVLGITSEDYAK-------YNDDKRLPFL----ARYANRYAPGSTFKTITATIGLDTGITKPDKVREIWGKYFVTRVHDVPKVNMTDALVHSDNIYFAQEGLEIGKDKLTAGLKKFDFDKEY-----DTSYGQGELLMSPIQQAIAYSAIANDGQATEAKSANQVKAALVKTVSDGHSIAAKTGTAELDGLENGFVYAFDADNPNYLMVGMIENGSGLVIDKLKPVIESM..... 676
8 -42.500IDP01258 gene: pbpC; penicillin-binding protein 3 BA_2238 [Bacillus anthracis str. Ames]  ali follow..  21  337...................................QEKTYNEMKGEAGSSAAINPKSGETLALVSNRFTQLSVPGSVFKPITAAIGLETKTIDPKEELKIWGNYYVTRVKDANPIDFDKAMKYSDNIYFAQEALKIGKDKFMSEAKKFGFDEKLPIE--DTGYGQGQVLMTPLHLALTYAPIVNDGNVISKGNQDILKTAMTKVINDGMTLAGKTGTAELGKELGWFAAF-DLNSPDMVITMMIEDGSNIPAEKVKHVFQK...... 661
9 -42.300IDP95166 peptidoglycan synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002919585 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  16  292.......AVVVVDPRDGGVLAMVSSPSYDPNPFVKGIGYQA----------YKSLLENPDRPLINRVTQGLYPPASTVKPYMALSALSAGVITPNTTFFGAPTYRDWLKTGHGMLNVTKAIEESADTFFYQVAFEMGIDRIHEWLSKFGYGQWYQGDTISVGIGQGYWIATPIQMVKALTTLLNNGGDPKSPYWGIVRNGMYGMANQPYQIAAKSGTSQVLRDHIFYTLFAPYQHPKVAMALILENGGVVAGPTARAILDHI..... 633
10 -41.200IDP06526 gene: pbp5; penicillin binding protein 2 prime [Enterococcus faecium DO] AFK59080 [Enterococcus faecium DO]  ali follow..  18  352...................................QKTAFDSLGGKAGSTVATTPKTGDLLALASSRFATGYAPGSTFKMITAAIGLDNGTIDPNEVLTIWGSYQVTRVSDVSQVDLKTALIYSDNIYMAQETLKMGEKKFRTGLDKFIFGEDL-----DTGYGQGELLINPIQQAAMYSVFANNGNVIGETAVQTIVPDLREVVQDGIPLAAKTGTAEIGKENSFLFAFNP-DNQGYMMVSMLENDDDSATKRASELLQYL..... 673
11 -38.300IDP01244 penicillin-binding protein BA_2504 [Bacillus anthracis str. Ames]  ali follow..  15  244.......YAVVSDAKTGAILTMANSAVFDPNILHTHVSTKID----------LKSLSQNKAIQKLKYGESYINMASTIKPLTILIGLNEKLFQPEDTYLDKGTFENAPGTPTGEITPRQAIINSSNTFMTAKNVEKVAHIWTDYLMQFGLRSNGISALLNASWGGN-EVHTPLQLAQYAATLARKGDKYKPQMTSAIIGNIEEIKKLPFDVAGKTGITGFPDNHSLFIAYAPTEDPQIAVSVVIPGEKNIAALVTSEILESW..... 572
12 -35.900IDP05079 hypothetical protein lmo1438 [Listeria monocytogenes EGD-e] lmo1438 [Listeria monocytogenes EGD-e]  ali follow..  17  347..............................................RAFVVAMDPYSGEVLALSLGTFTTAYAMGSAVKGSTILGGIMDGAITNKTVFTDQPIVFNRTGAGNRPLDPVGALEISSNSYMYQVAMKMGFDDMRYYYNQFGLGDQTIGKILDFAIGQYDS-YTPLQMAQYVSTIANGGIGVSESDIKTVQQGFYEVTHGDYDVAGKTGTADASVWNTTFVGYAPVEKPEIAISVVVPTDQKTNMKISKEVFDKY..... 684
13 -34.500IDP00720 gene: pbp3; penicillin-binding protein 3 SACOL1609 [Staphylococcus aureus subsp. aureus COL]  ali follow..  12  333..............................DKQIKKLRSQGAKDMDNAMMVVQNPKNGDILALDIGTFTSQFAVGSSVKGGTLLAGYQNKAIKVGETMVDEPLHSYFNKNGHVTINDKQALMHSSNVYMFKTALKLAAQKLRRGLNQVGLGTNNPGNYLDLSIGQYDT-YTPLQLSQYVSTIANDGVNNTEKEIKQIQEGFKMAFNDVVPTAGKTGTAEVPRVNSTYIGYAPIDDPKLAFSIVYTNQPLTGGDLGRDVINYY..... 676
14 -33.800IDP01224 sporulation specific penicillin-binding protein BA_4054 [Bacillus anthracis str. Ames]  ali follow..  18  236.....................................IAESTYNPDGMIAIAMNPKNGEILGMRNLPVWSTYEPGSTFKIITLAAALNENLVDLEKDTFYDDGAKCWKAGGHGSQTFLEVVQNSCNPGFIELGDRLGKERLFKYIRNFGFGKVGPVEQATTSFGQG-VSVTPIQQVAAVAAAVNGGTVISKETSEKVRYALENVVAKGYRVGGKTGTAQKVKDGKYFIGFAPADDPEIVVYVAVDNGGVVAAPIVGNILPVMGVKP. 567
15 -33.200IDP04394 gene: spoVD; stage V sporulation protein D [Clostridium perfringens ATCC 13124] CPF_2117 [Clostridium perfringens ATCC 13124]  ali follow..  14  231......VSIIVMNPKNGEILAMANKPDYNPNE----------PYKGYENFPGKDKTEKMENMWKNDAVSNSFEPGSIFKMVTSSAAVQEGIAGGNETYFCPGGKKCWKPDGHGTETFDQILENSCNVGFMDIGQKLGKEKLNEYIEKFGFGKIGPVELATISFGQT-DSASSVQMMAAMNTIANGGTIIDQKTAMRVSEALEKTVHEGYGIAGKTGTAEKVKASGGFAGFAPYNDPQVSVLISVDNGGLVAAPLAHDLFSDI..... 556
16 -33.200IDP01250 penicillin-binding protein BA_4497 [Bacillus anthracis str. Ames]  ali follow..  18  344..............................................RAFVVMMNPKNGEVLSM-LGTMTSSYPMGSTVKGATVLTGYQTGAIQPGSVQLDEPIRLKGTPKTMGYINDLTALKMSSNVYMFKTAMNIAFDTMRYYFGQFGLGGNQPGFLLDLSIGQYDT-YTPLQLAQYVSTIANGGIDMPESQIKRVQEGFRQVFNDPYKAAGKTGTAQTETYNLTLVGYAPLEDPEVAFSVVVPWKSGINGYISRDIMDAY..... 680
17 -33.000IDP04267 gene: spoVD; stage V sporulation protein D [Clostridium perfringens ATCC 13124] CPF_2134 [Clostridium perfringens ATCC 13124]  ali follow..  12  262......VSIAVMNPNNGEILGMVNKPGFNPNN----------PYEGSEAFKGKDESAKLQNMWRNTIVSDAFEPGSIFKIITSIAAIEENIAGKDEVYYCDGSLKCWKPGGHGVQNFNQTLENSCNVAFMEMGAKLGAEKLNEYIKLFGFGDISAVDLATISFGQT-NTMNGIQFMTALNAVANGGDIVDEKSTMRVKEALESTVSNGIKVAGKTGTAEKVDPET-FAGFAPYDNPQVSLIVIIDNGGIVAAPFAGELFNNI..... 589
18 -32.800IDP92561 Chain A, Crystal Structure Of Penicillin-Binding Protein 2 From Neisseria Gonorrhoeae Containing Four Mutations Associated With Penicillin Resistance 3EQV_A [Neisseria gonorrhoeae]  ali follow..  16  214.....................................KAVEYHQAKAGTVVVLDARTGEILALRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGRWRPIEQATMSFGYG-LQLSLLQLARAYTALTHDGV-FKEXTAREVRNLMVSVTEDGFDVGAKTGTARKLVNGRYFIGFAPAKNPRVIVAVTIDEGGVVAGSPFKKILNILGISPT 530
19 -32.800IDP04190 gene: spoVD; stage V sporulation protein D [Clostridium perfringens ATCC 13124] CPF_0544 [Clostridium perfringens ATCC 13124]  ali follow..  15  253......ASVIIMNPNNGEILAMSNKPDFNPNK----------PYDGAENFSGNTSSDRIQKMWRNRSVSDSFEPGSIFKIITASAAVQEGVAGKDETYTCSGGLKCWKRGGHGTQTFEEIIQNSCNVGFMNLGEKLGAEKLNEYIKKFGLGNITDMDLATISFGQT-NTVNPIQFMTAVNAVANGGTLISKETADQIKLALENAVKEGYGVAGKTGTAQKVNPET-FVGFAPYDNPQISVMVSVDNGGRVAAPLAGMLLQNI..... 580
20 -32.600IDP00548 gene: ftsI; penicillin-binding protein 3 YPO0549 [Yersinia pestis CO92]  ali follow..  16  249.....................................NAVAFNKAESGTAVLVDVNTGEVLAMRNRAITDIFEPGSTVKPMVVMTALQHGVVKENSVLYFVNGHQIKDVARYAELSVTGILQKSSNVGVSKLALAMPSSALVDTYSRFGFGRWSDIERATFSFGYG-LMVTPLQLARVYATIGSMGV-FPEPLVRTVVHMMESVALPGYRIAIKTGTAKKVGPDGKTAGVAPASNPRFALVVVINDGGAVSAPVFGAILRTMNIEPD 565
21 -32.600IDP00305 gene: pbpB; penicillin-binding protein 3 CBU_0118 [Coxiella burnetii RSA 493]  ali follow..  16  229.....................................ETVSTYHAQSGSVVVLDVKTGEILAMRNRAVTDMFEPGSVNKPFTIALALESGRYKPDTQINTNPGWMKIGGY-YGVVTLTQLLQKSSNIAAAKILLSLTPQHYYTLLHAFGFGTWVPSVVATLAYGYG-LAVTTLQLAQGYAVLAAGGI-LPENVAKTVIKMLETVVQYGYSVAGKTGTAYIAGPNGYFVGIAPANNPRLVVAVVIRDGGIVAAPLFSKILRILDVPPD 546
22 -32.500IDP01457 penicillin-binding protein 3 VC2407 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  256.....................................QAMADYRATSASAVMLDVKTGAVLAMRNRVITDAFEPGSTVKPFVVLAALANGIADKNTIIDTGDGTMQIGGS-VGKADLTLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGRWSQFEIATLSFGYG-LAITPIQLAHAYATLGNHGK-VDPKYVNQVLEMLETVTQPGYRIAAKSGTSRKAIAGGYTAGVAPVSDPRISLVVMVNEGGAVAGPVFSEILQILNIAPD 573
23 -31.800IDP01245 penicillin-binding protein BA_2637 [Bacillus anthracis str. Ames]  ali follow..  17  349..............................................RAFVVMMNPKNGQVLSMAGGTMTSSYELGSTVKGATVLTGFETKAITPGTYFYD-GTREKKSWKEFGNIDDLRALQVSSNVYMFHTALKIAFDKMRYYFRQFGLGDNQPGFLLDYSIGQYDT-YTPLQLVQYISTIANGGVDMKEEYIKQVKEGFRKVFQDGYKPAGKTGTAQTECYNLTLAGYAPYDNPEVAFSVVVPWVMGINSDIGKEVLDAY..... 687
24 -31.700IDP92560 Chain A, Double Mutant Pbp2x T338aM339F FROM STREPTOCOCCUS Pneumoniae Strain R6 At 2.4 A Resolution 1PYY_A [Streptococcus pneumoniae]  ali follow..  13  231.....................................AFQEKVKGKYMTATLVSAKTGEILATRDILYQSNYEPGSAFKVMMLAAAIDNNTFPGGEVFNS-DWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPT--NIAQSSFGQG-ISVTQTQMIRAFTAIANDGVPVSKDAASLTRTNMVLVGTDGQNVALKSGTAQIADEKN-AVSMSPAENPDFILYVTVQQLGEFANPILERASAMKDSLN. 571
25 -31.000IDP00794 gene: pbp1; penicillin-binding protein 1 SACOL1194 [Staphylococcus aureus subsp. aureus COL]  ali follow..  16  258.....................................GMVERYQPKDLFAVVMDAKTGEILAYANDLYQNTYEPGSTFKSYGLAAAIQEGAFDPDKKYKS---ISDWNRVGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERFGFGKST--QQKTSSFGQS-TTVTPVQMLQAQSAFFNDGNPITKDTAEKVEKQLDLVVNDGYEVEGKTGTAQVAAPNG-FMGDAPKKNPKVIVYAGMSLYELGVSKAFKPIMENT..... 581
26 -30.700IDP92623 gene: ftsI; peptidoglycan glycosyltransferase [Acinetobacter baumannii AB0057] AB57_3655 [Acinetobacter baumannii AB0057]  ali follow..  16  278.....................................AAGVANNARSATAIAVDVKTGEILAMRNRGAIDMFEPGSTMKPFTISAALETGQYTPNTIVNTSPGSMRLGWH-YGALTVSGVIIKSSNVGSAKIALSLPKETLPSFFNRVGFGKLNSSQIGTMAYGYG-LNATILQLAQGYAMLANHGV-LNPKIADQVLLMLEQVTMPGYRVGGKTGTAHKNEYRALFAGVAPISDPRLAVIVVVENGGLVAAPVFARILRLMNVPLD 598
27 -30.600IDP95083 RecName: Full=Penicillin-binding protein 2X; Short=PBP-2X; Short=PBP2X P59676 [Streptococcus pneumoniae R6]  ali follow..  13  279.....................................AFQEKVKGKYMTATLVSAKTGEILATRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNS-DWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPT--NIAQSSFGQG-ISVTQTQMIRAFTAIANDGVPVSKDAASLTRTNMVLVGTDGQNVALKSGTAQIADEKN-AVSMSPAENPDFILYVTVQQLGEFANPILERASAMKDSLN. 619
28 -30.400IDP91876 gene: ftsI; septum formation, penicillin binding protein 3, peptidoglycan synthetase [Acinetobacter sp. ATCC 27244] HMPREF0023_2561 [Acinetobacter sp. ATCC 27244]  ali follow..  17  278.....................................AAGVANNARSATAIAVDVKTGEILAMRNRGAIDMFEPGSTMKPFTVAAALESGQYTPNSIVNTAPGTMRLGWH-YGALTLTGIIVKSSNVGSAKLALSLPKEALPSFFRRAGFGKLNSSQLGTMAYGYG-LNATILQLAQGYAMLANHGV-LDPKIADQVLMMLEQVTLPGYRVGGKTGTAHKSEYRALFAGVAPVSDPRLAMIVVVENGGLVAAPVFAKILRLLNVPLD 598
29 -30.100IDP01249 penicillin-binding protein BA_4055 [Bacillus anthracis str. Ames]  ali follow..  15  249.....................................EASKHYEPESLIGIVADPKTGKILGMYNDAIANAFEPGSTMKIFTLAAAINEGVYKGQDYYQS---KDHNGGAGWGSITFDEGVERSSNVAFAILGQKLGPERFRKYIHSFGLDEKT--QQVTTAFGQG-STVTPIQLVQAATAIANDGKPVTKETAAQVRQLLERVVTDGYSVGGKTGTAQIPDGKG-FLGMAPMDDPQLVVYVAVKKGAQPLADIFKYVLEYLKIKPN 580
30 -30.000IDP01246 penicillin-binding protein BA_2648 [Bacillus anthracis str. Ames]  ali follow..  13  244.....................................KAQDHYDPSMLLGIIADPKTGKVLAMLNDPIANAYEPGSTMKVFTLAAAINEGVYNGKEYF-----KDHNGGFGWGSITFDEGFERSSNVAFSILEQLLKPNKFKQYMNKFGFNQKT--QQVTTSFGQG-STVTPIQLIQAATAIANDGKPIKKETADKVRDLMERVITDGYPIGGKTGTAQIPNPEN-FLGMAPIDDPELIVYLAIKQGAQPLAEIFKPVLEYLKVRPY 576
31 -30.000IDP00344 gene: pbpB; hypothetical protein lmo2039 lmo2039 [Listeria monocytogenes EGD-e]  ali follow..  14  258.....................................TVDAKYKPKNMMAVVADPKTGEILAIQDLPVEYAYEPGSVMKIISLASAIDTNAYNANEYYQS---HDHNNGNGWGSITYREGVERSSNVAFAKLLNKMGTDTFKTYLDKFGFGKKT--EKVTTVFGQG-TTVSMMQMIQAASAIASDGTPISAETAKKTRDELKNVISPGYDVAGKTGTSQIPDPKT-FLGMAPADNPELVIYVTMQQGGEAVSEVFNPVMKNS..... 585
32 -29.700IDP02787 gene: ftsI; penicillin binding protein (peptidoglycan synthetase) [Francisella tularensis subsp. tularensis SCHU S4] FTT0697 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  16  237.....................................EGVIRTNSEAGSVIVEDIHIGEILAMRNRAITDVYELGSVMKTFAAATALTYGVTSDEPVIDTHPGFYRIGKN-YGDINLRHILMKSSNVGVSKMILGLTEPSLESSLRNFGFGKWGDFQLATLSFGYG-MNATDLQLIAGVSAIANNGQ-ISEKNSKEMISMMQSVVEPLYHVAGKTGTARMAKYLASFVGIVPATDPKLAIVVTIKDGGSVAAPVFADVLQILGVKLD 560
33 -21.700IDP05542 gene: pbpA; hypothetical protein Cj0504c [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0508 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  17  281........YKIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLAL-NRATQSMRQPGSSFKPFVYQVAINLGEIADISRIFEGGA-KNEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPNLSIV-----GSFGISPLEYSKFYTMFGNYGT-SDEAQSFLVLDMMRNVVEKGIEIAGKTGTTNKSVD-AWFCGLTPEGNDNNKPMRYTEGGARTAAPVFREFLTQY..... 594
34 -21.100IDP06098 penicillin-binding protein [Helicobacter pylori J99] NP_223262 [Helicobacter pylori J99]  ali follow..  13  327...........................................DNLNASMIVTETSTGKILAL-NRATQAKRQFGSAIKPFVYQIAFDNGKIPDTARNFENGNYSNYTRKFLGLVTLQEALSHSLNLATINLSDQLGFEKIYQSLSDMGFKNLPKDLSIV-----GSFAISPIDAAEKYSLFSNYGTMLKPMLIESITNALMDAVENGLEIAGKTGTSNNNID-AWFIGFTP----TLQSVIWFATGGVVSAPVYSYFMRNI..... 610
35 -20.900IDP00317 gene: ponA; penicillin-binding protein 1A CBU_1887 [Coxiella burnetii RSA 493]  ali follow..  15  425.............................................VEGGLVALNPQDGAVNAL-NRITQAERQPGSNFKPFLYSAALTKGMINDAPVVMQDSGEMNDTRKFYGPTSIRMGLIKSRNLVSIRLLQKIGIPYAIEYLTRFGFDPNVLPHSLSLAL--GSATLPPLQVASGYAIFANGGYRVTPYFISRIEDAMHDVIQYGTDLAGKTGTTNDQVD-AWFSGF----NANLETTVWVEYGAQAALPIWIQFMRAA..... 722
36 -20.900IDP00592 gene: mrcB; penicillin-binding protein 1b YPO3393 [Yersinia pestis CO92]  ali follow..  14  439...........VKIFTTLDPVSQDAAEKAIEDGVPALRAARNMNDLEAAMVVVDRFSGEVRAM-NRAMQARRLVGSLAKPPTYLAALSEPWLSDQPLSLKLSNGSLWQPKFRGQVMLMDALVNSLNIPTVNLGMSVGLDQISATLQRLGIPKSVINPVPAMLL--GAIDLTPVEVAQEYQTIASGGN-VPAQASYLTLYAMQQGVVRGYNLAAKTGTTNDLRD-SWFAGI----DGKEVTIAWI-TGASGALTLYRRYLENQ..... 751
37 -20.400IDP00910 gene: mrcB; penicillin-binding protein 1b STM0190 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  431...........VKIFTTFDSVAQDAAEKAVVEGIPALKKQRKLSDLETAMVVVDRFSGEVRAM-NRAMQARRSIGSLAKPATYLTALSQPWIADAPISLRQPNGQVWSPQ-SGKVMLVDALTRSMNVPTVNLGMALGLPAVTDTWTKLGVPKDQLNPVPAMLL--GALNLTPIEVAQAFQTIASGGN-VPAQAAYLTLWTMQQVVQRGTHLAGKTGTTNNNVD-TWFAGI----DGSQVTITWV-YGASGAMAIYQRYLANQ..... 745
38 -20.100IDP01241 penicillin-binding protein BA_1474 [Bacillus anthracis str. Ames]  ali follow..  14  304................TELDPKKQQAVEDVVNNDSYFKDSGSDQLMQTGVVLMNPTTGGVPAL-NHATQLKRQPGSTLKLAVYVPALEQGILKDEPFNIKEYKPQNSDHTFHGDVTMYEAVAKSYNVSAVWLLEQIGLDKGLKSLERFGIPLVPEDRTYPIALGGMHVGTSPFVMAQAYSTFANDGV-TSEKISQKMTYLLKGVVEKGVDTAGKTGTTQIVNG-SWFVGYTPDGYDKTDSDHYVPGGSQITTTMFRDIMKKA..... 615
39 -19.100IDP02545 beta-lactamase [Francisella tularensis subsp. tularensis SCHU S4] FTT0611c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  1MRLLVTTLSLI-----------PSIILAAPQLDDSFKNLENKYDGKIGIYTL-NTDDKTNIKYNES---YHFPICSVFKFLLVGGFLDKKIPINQDDIGKLGYAPITAKNVGKTL-LNYAAILSDSPASNILVRELGLQNLNKFIKKLGDNDTIITADEPEI-HSNINKTTPKAITKDIYKLAFGNI-LDKKHKDIFIKYLQDNNTKDWIIGDKTGTCGQYAATN--VAIIPKNQQPIALGILYTNPNDKNAPSNEEIIQQAA.... 275
40 -19.100IDP00042 gene: bla1; beta-lactamase BA_2507 [Bacillus anthracis str. Ames]  ali follow..  12  23.....ITSLVTFTGGALQVEAKEKTGQVKHKNQATHKEFSQLEKKFDARVYAIDTGTNQTIAYRPN---ERFAFASTYKALAAGVKLDEVITYTKEDLVDYSPVTEKHVDTGMTLGAEAAVRYSDNTAGNILFHKIGPKGYEKALRQMGDRVTMSDRFETEL-GDIRDTSTAKAIATNLKAFTAGNA-LPNHKRNILTKWMKGNATTNWVVADKSGAGSYGTRN---IAIVWPPNRAPIIIAILSSKDEKGATYDNQLIAEAA.... 301
41 -18.900IDP01007 gene: pbpC; penicillin-binding protein 1C STM2531 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  272..................IVTTLDAGLQRQLEDLARAWKGRLPARSSLAMIVVDHTDMSVRGWHVDMVTAIRSPGSVLKPFVYGLALDDGLIHPASLLQ-----GNFDSGFHGPVSMSDALVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYPAGAAPNLSLILGGAGARLDEMAAAYSAFARHGK-MSPGAAWIIRRIMADEAQPLVPLAWKTGTSYGYRD-AWAIGV----NARYIIGIWTGRGFASAVPLLNQVNNLL..... 564
42 -18.200IDP01240 gene: pbpF; penicillin-binding protein 1 BA_1069 [Bacillus anthracis str. Ames]  ali follow..  17  288..................VPMDEKIQKVAYNQFQDARNFPGKEEGAQGAFLLMDNRTGGIKAAGFNRVFAKRQPGSVLKLIVYAPALETKLLTNERHSFEGYEPRNYNREYSKEITMYDAILESANVPAVSLLNELGVEEGKQYLEKGNVHIAD--AGLSTALGGLKNGVSTFDLVKMYRAFLANGD-FSKQTAWYMTKMLEGVVKEGTALAGKTGTTSLPND-MWFVGYTPNGYDRIDKEHKLQGESASATKLFKKILTKA..... 592
43 -18.200IDP00358 hypothetical protein lmo2229 lmo2229 [Listeria monocytogenes EGD-e]  ali follow..  14  354..............................................QSGAVLMDPATGGIRAL-NRATQMKAQPGSTMKLAVYTPALQSGMLKDEKITYKGNYTTNVGGVYSGEVPMYKAVANSINAPAVWLLDQIGIDKGVKSVEKFGITVPEKDRTLGLALGGMSKGASPVEMATAYATFANNGA-ISETVSNEMTSMLLDVINTGHEMAGKTGSTQVPFD-QWFVGYTPNYDKTDKEHYLTTTSSAGVSSLAHYVMNSG..... 637
44 -17.400IDP01252 penicillin-binding protein BA_5623 [Bacillus anthracis str. Ames]  ali follow..  15  320...........................................TNIQTALVSMNPKTGEVAAL-NRATQGARQPGSTFKPFLYYAALERGFFTLGDGVSKYKPKNYKDYYADDFVTMAQALAVSDNVYAVKTNLFLGEDILTKTAKQFGIKSAL---KDVPSLALGTSPVKPIEMVNAYSMFANGGK-LDKNKAFVMEEMMTGMFNKKLSYAGKSGSTETD---SWMIGFTP----QIVTGVWV-AEQGYAKRIWTDTMEKG..... 604
45 -17.300IDP00591 gene: mrcA; penicillin-binding protein YPO0145 [Yersinia pestis CO92]  ali follow..  13  433.............................................VNSALVSIDPNNGAIKAL-NRATQALRQVGSNIKPFLYTAAMDKGILNDLPITRWDSGAKNSPPTYDGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHSESLAL--GSASFTPLQLVRGYAVLANGGYLVDPYFITKITD--AGRDLKRKDIGGKTGTTNSSKD-AWFSGYGPDDDHRRNLGRS-EGGAKTAQPAWNDFMKVA..... 792
46 -17.200IDP01726 D-alanyl-D-alanine carboxypeptidase family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA5252 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  1MKRTIVMIVMIATLFTGMIFFSYAQRQQAVRADQPSITGQ--------YGITIDADTGEIL---GKREDERSYPASIAKMMTTLLLLENVTVTENAIKTESQSKKIKLRAGEKDEALKLMLIISADPIAESIAEHIA-GSKNEFVKMMNARAKELGTKHATFKNASGA-VSPYDIAMITKEALKYPLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKY---VVTVDEKDGKRVI-NVVLSSTRKQLYPDTKKMAH....... 272
47 -16.900IDP01499 gene: pbpG; D-alanyl-D-alanine endopeptidase VCA0870 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  1MKIFSRLGHVLLICSSLIIAIPAHSADSSTTTKAGVKKTVKKQELSANSALVIDLKTNEII---SNNPDAVKPIASVTKLMTAIVTLDAKLPITIKDAKEMKGVHSRVKIGSEKDMLLLTLMSSENRAAASLAHHYPIKAMNAKAKALGMKNTRFVEPTG---LSAKNVSTARDLVVLLKASKKYPL--PRYTLDFRNTNRLVHNDNWKIDLTKTGFTNAAGH---LVMRTQMGRRQVAFVVLDTKGKLSPVGDANRLRT....... 282
48 -16.800IDP02791 gene: pbpA; hypothetical protein lmo1892 [Listeria monocytogenes EGD-e] lmo1892 [Listeria monocytogenes EGD-e]  ali follow..  9  322..................TALDRDAQEYTEKMLNTNEIVNFTDDEMQAGIVLQDTKTGRVQAI-NYATQVKRSVGSTMKIADYGPAFEYLDWSTAHILE-----NNWDFGYKGPISVRQALYQSRNIPALKTLQAVGLDKSEEFVNKLGITYDEGQNVESNAI--GANSSNPMQMAGAYAAFGNKGI-MKESTAYMVSDVLKDVLSIGVPAAGKTGTTNIPPEFSWFAGYTTN----YSIAVWTASEQKIAQRMFSKLMAHA..... 637
49 -15.900IDP01243 penicillin-binding protein 1A BA_2345 [Bacillus anthracis str. Ames]  ali follow..  13  346...........................................DKFQSAFTFMDTKTGEVRAI-NMAIELDRAAGSTMKIFDYGPAIEYLKWATYHQID---EVRNADRSHLGSITMREALKMSRNVPAVKAAKEVGLNKAKEFSEKLGITLKSAPESTA-----GTNEVSPTEIAGAYATFGNGGK-IADSTAYMITDMLRSVVTSGLDVAGKTGTTNYDSKQSWFAGYTPQ----YTMAVWTSKNTKIAQLIFKEMMSEM..... 637
50 -15.300IDP05345 gene: pbpG; penicillin-binding protein 7 [Escherichia coli O157:H7 EDL933] Z3383 [Escherichia coli O157:H7 str. EDL933]  ali follow..  11  4MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASG-------SAMIVDLNTNKVI---SNHPDLVRPIASISKLMTAMVVLDARLKVDISQTPEMKGVYSRVRLNSEKDMLLLALMSSENRAAASLAHHYPIKAMNAKAKSLGMNNTRFVEPTG---LSVHNVSTARDLTKLLIASKQYPL--PTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGH---LVMRTVINNKPVALVVMDAFGKYTHFADASRLRT....... 278
51 -15.200IDP01242 penicillin-binding protein BA_1572 [Bacillus anthracis str. Ames]  ali follow..  15  347...........................................DQFQGSFVFMDTQSGEVRAI-NMATDLKRQVGSTMKIFDYGPAIENLQWSTYHQLN---KIRNATNSYKGDVSLREALKKSLNIPALKTAQAVGLPKSQAFAEGLGMTFKDGKTFESTAI--GSNDSSPLQLAGAYAAFGNGGN-MQDYTAYMVTDVLRDVVKPGVDVAGKTGTQNFDADVSWFAGYTPQ-EKNGPENYISDRYTRIAQQMFQVMMSKF..... 643
52 -14.600IDP02617 D-alanyl-D-alanine carboxypeptidase family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA1286 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  4FKKISAFITVIGLFFLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTI-DAKTGDILY--DKNAHHRAFPASMTKVLTAILLMEHTKPEDQLALDQEKSNYQIEFQPGETINRNTALMLSANDVSYAIAERIGANMMNERAKQLGATDSHFPNHYTTPYDMAMITRGVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARN---LVLLNEKDGNRII-NVVMASQRPEIYEDLKQMAD....... 280
53 -14.400IDP02666 D-alanyl-D-alanine carboxypeptidase family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA1490 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  1MRRICVIITLLIIYASVMPIPTYAKMNSNVSAR---------------NAVLMEQHSGRVLY--GKAEHEPQKIASITKIMTALLAAESGKMKESNEAVRVEGSAIYLKPGQKEDLVYGLMLRSGNDAAQVIAENVGVYLMNEKAKQIRMGLDGDGSHYSSAYDMALLTRYAMGNETFKEIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGR---LVTTASKDGLDLIVVTL---SASSDWDDHMNLFD....... 260
54 -14.400IDP91872 gene: vanYD; D,D-carboxypeptidase VanYD [Enterococcus faecium] ACM47285 [Enterococcus faecium]  ali follow..  15  110................................................NAIVVNKDTDAVL---QKNGTDRIAPASTAKMITALTVLEYCRVGAEIEMIHSDSSTAWLMKGDTRQLLIALMLPSGNDAAYTLAVNTGQQAIKIFMDKVNEKARELGVTDSNFVVPDGY-TTAYDLAIIAKACLENPI--REVTYNNSNELLDPNSP-PEVIGLKTGTSSLGGA---VVSAAVIDGETY-ICVAMGSTKESRFQDSVDILD....... 358
55 -13.400IDP95290 D-alanyl-D-alanine endopeptidase [Acinetobacter baumannii ATCC 17978] YP_001083314 [Acinetobacter baumannii ATCC 17978]  ali follow..  14  13................................................AALVMDAQTGEVLY--SKNTNASVPIASITKLMTAVVTADARLNMSEEITLEQIDFAGAGGKNSSAEVLLFALMKSENPAAAALARTYPVAAMNAKARALGMNATHYYESTG---LDPRNVSSARDLGILASTASQYDFNLGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGR---VVMHTTVNSRPAVIVLLGEPSTQARNNDATNLLG....... 246
56 -13.400IDP05765 hypothetical protein lmo2812 [Listeria monocytogenes EGD-e] lmo2812 [Listeria monocytogenes EGD-e]  ali follow..  11  1MKIHKLTWVLLIGLLLLSACSTEQPNLYLSAN----------------AAAVYSVENGEALY--EQNADKVMPIASLSKLMTAFLAVDNNELSWDEKLDLVRLDDPSAVS-KRTWSVRDLYSMSANDAAETLGDRLDPKEMNNQAKKLGMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPTSKPTVTTDKGAKLESTND--GLDGKTGFTDEAG----FIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME....... 266
57 -12.900IDP02399 D-alanyl-D-alanine carboxypeptidase family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA2559 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  4LKKITILLLSFVITALIVLYFYLYVNGPIIQAK---------------SAILIDANSGEVVY--KKNEENSIQSATLSKLMTEYIVLEQEVVKISNEVFRAETSPIQVTSKDKTLALAEHIAGNEDNFTQLMAKQLKLSQPSPFLNATGMNNGTNKLSTTTAIEVGKLAVTDFPDVLNVTKLTSYQFTFKDTKVF--TNKMIYSLNKNIKLQGQTSFSTNSN----FVSTAKRGDTRLISVILDADNENSTFIETKKLLQ....... 280
58 -12.400IDP02523 gene: dacF; D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. `Ames Ancestor`] GBAA4297 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  1MKRVFGILVCFMLLLSGTSVSFAQSEKTKQDKTEETTPKLAEQAS---SAIVIEQDTGKVLF--DKNPNEKLPPASMTKIMTMLLIMETDKVRASEHAASMGGSQIFLEPGEENEMLKGIAIASGNDASVAVAEHIAVNMMNKKAKDLGLKNTHFQNP--TGLPAKDHYSTANDMAIMAKELMKY--PLIRKYTGKYEDYLREDTDKKFWLVNKTGFTTEAK----LTASAEKNGMRVISVVMGAPTSKERNNQVTKLLD....... 281
59 -12.200IDP01885 D-alanyl-D-alanine carboxypeptidase, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA5639 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  1MKKILSILLALLLSISSLGVTTSHAEEKIHIEAA--------------AALLFDADTGKILH--EQNPDELLAIASMSKLIVVYAAIKEGKITWDTKVNISDYAYE-FSANGSSIALAELLAGSEKNFLNLAAKKLGLKK-YKFVNATGLNNTDLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENKTGSSDTAG----FTITAKRGDVRLISVIIKTKSMDERFTESRELIE....... 293
60 -12.100IDP01407 D-alanyl-D-alanine carboxypeptidase VC0947 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  1MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAK--------GYVLMDYHSGKVLA--EKEMDTKLSPASLTKMMTSYVEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDAMNAWASSLGMKNSHFTNS--HGLDDPNLYSTPYDLALLGQALIRXKFTYNGITQYNRNGLLWDKSMNVDGI--KTGHTSGAG----LVSSATEGNMRLVAVVMGTDNENARKAESKKLLS....... 276
61 -12.000IDP05772 gene: dacD; penicillin binding protein 6b [Escherichia coli O157:H7 EDL933] Z3171 [Escherichia coli O157:H7 str. EDL933]  ali follow..  11  38LKRRLIIAASLFIFNLSXGFAAENIPFSPQPPEIHAG-----------SWVLMDYTTGQILT--AGNEHQQRNPASLTKLMTGYVAIDSHRITPDDIVT--GSSLMFLKEGDRRDLSRGLIVDSGNDACVALADYIAVEMMNNYAEKLHLKDTHFETV--HGLDAPGQHSSAYDLAVLSRAIIHGSLTWNGITQQNRNGLLWDKTMNVDGL--KTGHTSGAG----LIASAVDGQRRLIAVVMGADSAKGREEEARKLLR....... 313
62 -11.700IDP01881 gene: dacA; D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. `Ames Ancestor`] GBAA0009 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  3CKRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAG-----------AAILVEANSGKILY--QKNADELLSIASMTKMMSEYLAVDKGKFKWDQKIKVSEYAYK-FSANGATIALAEAIAGKEVDFVKMMSKELGLKN-YKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQHLIKDYP-EKFAMSNWNWMLKGLVKEYDGVDGKTGSTPEAG----FTGTVERNGMRFISVVIKTSSHTARFDETKKLYD....... 297
63 -11.700IDP01487 D-alanyl-D-alanine carboxypeptidase VCA0270 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  1MTSTKFLVRFSMACMAFVPTLGFSALTVVPEPPQLAAN----------GYVLIDFHTGKVLV--EHNAHQKLNPASLTKLMTSYVEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDLMNSWAQQLGMNNSSFANP--HGLDNPALYSTPYDIALLGRAIIRDSFTYNGITQHNRNGLLRDRSMNVDGM--KTGYTSGAG----LASSATSGEMRLISVVMGSKSVKSREAESKQLLS....... 274
64 -11.700IDP00982 gene: dacD; D-alanyl-D-alanine carboxypeptidase STM2062 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  11  3LKRRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAG-----------AWVLMDYTTGQVLT--AGNEHQQRNPASLTKLMTGYVAIDSHRISPDDIVT--GSSLMFLKEGDRRDLSRGLIVDSGNDACVALADYIAVAMMNSYVKKLNLQDTHFETV--HGLDAPGQHSSAYDLAVLSRAIIHGSLTWNGITQQNRNGLLWDKTMHIDGL--KTGHTSGAG----LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQ....... 278
65 -11.400IDP02740 D-alanyl-D-alanine carboxypeptidase family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA1950 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  15  67................................................AAMIIDASNGDIIY--QHNENEAFAPAAQTE---ARIPVQVNDTLTVKDLFH-------ESANNSAVALAEHMAKTEKDFVQLMAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAIKDYPEILEVTHLRQSQLAFNNINVISTNDMLNKNNKALYGIDGKTGFTDSAG----FTGTAKQGDTRIITVVMGTKGKTKRFTETNKLMT....... 278
66 -11.200IDP02327 gene: dacC; D-alanyl-D-alanine carboxypeptidase [Yersinia pestis CO92] YPO1320 [Yersinia pestis CO92]  ali follow..  11  33MKYILPFKIKNFTFSAGLLLLALPAAYAVDDPAAPQIDAK--------AYVLMDFNSGKVLA--EGNPDLRLDPASLTKIMSSYVSIKAGKIQPDDLVTLRGSSLMFLKPGDRSDLNKGIVIQSGNDASIALADYVAVGLMNNYAKALGLSNTHFMTV--HGLDSPGQYSTARDMALLGQALIRDEFTFNKIRQTNRNRLLWNSSLNVDGM--KTGYTNGAG----LVASATDGPMRLISVVLGAPSDKVRFSESEKLLT....... 311
67 -10.500IDP02286 gene: dacD; D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) family protein [Francisella tularensis subsp. tularensis SCHU S4] FTT1029 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  10  1MKLIKIALLTASITAGVAFAAPNISAYSDPLAQKDIIIRPANIELDAPAWVTMDYRTGDIVS--EKNMDVRRAPASLTKIMTSYIEIKAGNLSWDTMIASTGGSKMYVKAGAK-VSVRNLVTVSGNDATIALAEYIGTDLMNQTAKAIGMNNTHFANP--DGLPGGEQYTTAHDMALLARSYIYNGLVWNATKQDSVSIADRKQCLPK-----RATGNVIES----VKDLDDQAKDKCNKLFPKGDNFVLQNNRNRLLFT....... 287
68 -9.350IDP95095 beta-lactam binding protein AmpH [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002918033 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  11  1MKRSLLIFAALCAASWTSVQAAQPTVDPVFASDVVDRYANHIYYGSGATGMALVVIDGNQRVFRS-QLDSVIRIASLSKLMTSEMLVDQGVVKLNDPLSKYPPGARVPDWQGKPITLVNLATHTSQAAYSNLAATAAGKPYPQLFEEIPEKGASPCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSDFYTRSQQADRMQTLIYQRNQLTRVIGMDVPGRADALGLGWVYGFITYQANVGAFVVVTRSPLTRFNNMSDGINDLV..... 371
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.