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Query: [E] COG2902 NAD-specific glutamate dehydrogenase, from VFDB

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGYRNNPKREKQIEKARQQAIAENVQFLDPGILYGRASADDIEYYSAEMLAASAAHSFEALSHWTGDAPHISITTVEGVSPRDIPVTVLTIIGRNMPFLYDSVMGEVTSSYRGLYLAVHPILVRDDEAQGYRLAEPEDDPAENISLIQLHIAPLTPQAASALEERLRFVLTQVQSAYRDWRPMLTKLDEALDELSKRGSSRRKTERTEAVEFLNWLRNDNFTFLGMRDYTYSGKGKNAKIERGDGVGLGSLSDPDVRVLRLGKNAVTTTPEILAFLDGPDFLIVTKANVKSIVHRRAYMDYIGIKRFDEDGNVIGELRIVGLFTATAYTRSVKQIPLLRAKVADVERHFGFDPNSHSGRILQNTLEAYPRDDLFQIETDLLIRFIEQIMELSDRPRVRVLARIDRFDRFVSAIIFVPREEYNSYVREKIGDYLSRVYDGHISAYYPAFPEGAVARVHFIVGRTEGKTPRIAQDKLEDAVSDIAARWIDHFVALSEPGAPVLDVDQAYQEAFTPEEAIGDMPDILAAANGEPVRIEFYQQEGQSDDTLSLKIFHRDGHLPLSRRVPLLENLGFNVISERTFDIGVVSEGEKRDIVLHDMELSVAAGTTLDLPHYGPKLEEAFLAAFSGKVDNDNFNRLILACGLNVREVSVLRAYARYLRQTGIVYSQEHISETLYKYPDISRNIFALFKAGFDPSIEEKKRVKKLAEIHKAIEAALSGVPNLDEDRTLRRYVNAIDATLRTNYFQKNADGTPRDLLAFKFDPKHLDGLPDPRPFREIFVYGTEVEGVHLRFGKVARGGLRWSDRGQDYRTEVLGLVKAQQVKNAVIVPVGAKGGFFPKNLPAGGSRDEVFNAGREAYKTYIRTLLSITDNIVDDAIVPPADTLRLDGDDPYFVVAADKGTATFSDTANGLAHEAGFWLDDAFASGGSAGYDHKKMGITARGAWETVKRHFREMDTDIQTTPFTVAGVGDMSGDVFGNGMLLSEKIRLIAAFDHRDIFIDPDPDTDKSFAERKRLFELPRSSWQDYDRSTLSAGAMIISRSEKSVTLTPEAVAAIGLDKSVATPFEIMTAILKAPTDLLWFGGIGTYIKAAVETNAEVGDRANDPIRVNATELRAKVIGEGANLGITQKGRIAYALAGGRCNSDAIDNSAGVNSSDVEVNIKIALASAVNSGRLTMPKRNQLLASMTPDVAQLVLRNNYQQSLAISLTERLGLANREELGRLMGALEATGQLNRKVETLPNNAEFSERYASGKPLTRPEIGVLLSYAKLTLFDALVASPLPDEPYLQHLLLDYFPAKMQKNYANDIKAHRLHREIVATALANAVVNRGGPGFVQKLADASGLLAADVVKAAVIVEDGFGLKRLWTEVDALDGKVGGQVQNGLYATITRIFSDASRLYLQTGSAGAAAGDMATEIERLKTAIKTLSPAATKYRRELGVTEIDGVPSGLLEELDTLSLLVYVPEIMRIAESAGTTLARAAESYATVSSTFRVARLLDASQRITPADHYESLALLRSQDQISSSRRRIVISALTEYAKEKDPVQAWYAADRVRVNRIVSELGALSESGDTNLARLTVAAGLLGDIVQARLast
1 -156.000IDP91367 NAD-specific glutamate dehydrogenase [Vibrio vulnificus CMCP6] VV1_2638 [Vibrio vulnificus CMCP6]  ali follow..  41  1...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MLGLVKAQQVKNTVIVPVGAKGGFVCKRQHTMTNRDEIFAEGQRCYKRFIRALLDVSDNIIEGEVIPPKSVVRHDEDDPYLVVAADKGTATFSDLANSVSAEYNFWLGDAFASGGSNGYDHKAMGITAKGGWESVKRHFREMGIDCQTTDFTAIGVGDMAGDVFGNGMLLSKHIRLQAAFNHLHIFIDPNPDSASSWEERDRLFQLPRSSWEDYNPKLISKGGGVFSRKAKSITLTPEIQKMLGTKKTSLAPNELIKMILKMDVDLLWNGGIGTYVKASSETHTDVGDRANDVLRIDGRDLNAKVVGEGGNLGMTQKGRIEYALKGGRVNTDFVDNVGGVDCSDNEVNIKIFLNGLVSNGDMTVKQRNKILESMQDEVGDIVLDDAYRQSESISVTEQQGVSVVKEQIRFIHTMEKAGYLDRVLENIPDDETLLEREKLGQGLTRPELAVLVAYGKMVLKEQLANDEIANDEFHGQQLIQYFPSELRNKFANQMSSHPLRAEIIATSLANQMVNEMGCNFVTRLQQETGASVVDIANAYSASREIYGLGEILAQTRELDNIASADAQYEIMFHVRRMLRRVARWLLRNRSGKNTVSELIAKYQADVDVITHSLDNVEEHDELAESWICRGVEAKLASRVSRLTSLQSALDISSVARETNKTVEEAAKLYFNLGDRLSLHWFLKQINGQAVDNNWQALARAAFREDLDWQQRLLTAQVLNSKGDVMEALETWMERNETSLHRWESILNEFKVGSVHEFAKFSVALRELVLLNLN. 784
2 -20.900IDP92108 NADP-specific glutamate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_093180 [Toxoplasma gondii ME49]  ali follow..  14  55........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ANRFQPEFLQAFHEVFDSVRPVLCSNPKYLRAFKVIVEPERCITFRVPWVDDQGKQHVSRGYRVQ--------------------------YSSAAGPYKGGLRFHPSVT--LSVMKFLGFEQIFKNSLLSIGGAKGGSDFDP------KGRSDNEVMRFCQAFMTELSRYIGPNRD-------------------VPAGDIGVGALFGQYKLLKAGQGALTGKDKNWGGSAM----RPEATGYGCVYFVLELLKAQKEGIKGMRCAISGSGNVALYAG--EKLATLGAKVMTFSDSSGYIVNEKGFPLGQIQRLKE-------------------------MKETRSSTRVSEFAAKYSTVKFVPDKRAWEV------------PCDIAFPCATQ-NEISEEDAQLL-----IDNGCRIVAEGANMPTTRDAIRLFKQHGVILCPGKAANAGGVAVSGLE------MSQNAMRIEWTREVVDEKLRQIMASIFSKCRS--YAAKFGENEFDLVTGANVAGFVKVADCVIDQGYI.................................................................................................................................................................................................................................................................................................................................................................. 489
3 -20.800IDP02337 gene: gdhA; glutamate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1511 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  18...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................HFELLNSTQIVISEALEKLGYPNEVYELLKEPIRMMTVKI--KIFTGYRAQHNDATKGGIRFHPNVTE--NEVKALSIWMSLKCGILPYGGGKGGIICDP------REMSFRELERLSRGYVRAISQIVGPTKD-------------------IPAPDVFTSQIMAWMMDEYSRIDEFNSPGFITGKPLGGSHGRETATAKGVTICIREAAKKRDIDIKGARVVVQGFGNAGSFLA--KFMHDAGAKVIAISDAYGALHDPNGLDIDYLLDRRD-----------------------------------SFGTVTKLFNNTISNKELLEL------------DCDILVPAAIE---------NQITEENANDIKAKIVVEAANGPTTLEATKILTDRGILLVPDVLASAGGVTVSYFE------WVQNNQGYYWTEEEVEQRLEKVMVRSFDSIYETAQVRKVNM-----RLAAYMVGVRKMAEASRFRGWV.................................................................................................................................................................................................................................................................................................................................................................. 428
4 -20.600IDP02649 putative glutamic dehyrogenase-like protein [Salmonella typhimurium LT2] STM1795 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  17  2.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YHGQLKNILLLSLRFIMDKLSYASDS--STSAWNTYLQQIERVAPYLGELSPWVDTLRHPKRALIVDI--RHFEGYRVQHNLSGKGGVRYHPDVD--LNEVMALSAWMTIKCAALPYGGAKGGIRVDP------FSLSEGELERLTRRYTSEIGIIIGPQKD-------------------IPAPDVGTNVMAWMMDTYSMNHGT--GKPIHLGGSLG----REKATGRGVFVSGLEAARRANIAVEGARVAVQGFGNVGSEAA--RLFAGAGARVVAIQDHTATLFNATGIDMKALTAWQT----EHKQIAGFPGAETIASDAFWRLE------------------------------------------MDILIPAALE---------GQITRQRAEALTCKLVLEGANGPTYPDADDVLASRGILVVPDVVCNAGGVTVSYFE------WVQDMASFFWSEEEINARMDKIMTDAIVHVWEKAAEKSCSL-----RTAAYIVACERILLARKDRG.................................................................................................................................................................................................................................................................................................................................................................... 437
5 -15.800CPX_91688_91668 Complex of B1AP14_HUMAN with Q914E0_9ENTO [Undefined organism]  ali follow..  11  557................................YTIHVQCNASKFHQGCLLVVCVPEAEMGCSQTDKEVAAMNLTKGEAAHKFEPTKTTGEHTVQS---IVCNAGMGVGVGNLTIY---HQWINLRTNNCATIVNSVPMDNMFRHYNFTLMVIPFAPLDYAAQASEYVPVTVTIAPMCAEYNGLRLAYQQGFPVLNTPGSNMTSDDFQSPSAMPQFDVTPHMDIPG-EVHNLMEIAEVDSVVPVNNIKVNLQSMDAYHIEVNTGN------------QGEKIFAFQMQPGLESVFKRTLMGEILNYYAHWSGSIKLTFTFCGSAMATAYSPPGADVPATRKQATHMIWDIGLQSS------IPWISQTVQQDEYTSAGNVTCWYQTGIVVPPGTPNKCVVLCFASACNDFVRMLRDTPFIGQTALLQGDTETAIDNAIARVADTVASGPSNSTSIPALTAVETGHTSQVEPSDTMQTRHVKNY------HSRSESTVENFLSRSACVYIEEYYTKDQ-DNVNRYMSWTINARRMVQLRR---------KFELFTYMR-MEITFVITSRQLPGTSIAQDMPHQIMYIPPGGPVPNSVTDFAWQTSTNPSIFWTEGNAPPRMSIPFISIGNAYSNFYDGWSHFSQNGVYGYNALNNMGKLYARHVNKDTPYQMSSTIRVY--------------FKPKH---PRPPRLSPYIKSSNVNFNPTNLTDERSSITYVPDTIRPDVRTNGAFGQQSGAVYV--SYRVVNRHLAT-------RDLLVSTTTAHGCDI----IAR-GVYFCQSRNKHYPEGPGLVEVQE---SEYYPKRYQSHVLLAAGFSEPGD--------------CGGILRCEHGVVGIVTMGGEGVVGFADIRDLLWLEDDAMEQGIKDYVEQ--------LGNAFGSGGQDSILEKSLKVLVKIISALVIVVRNHDDLITVTATLALIGCGIPMAERQNNGWLKK-AIKIQKFIEWLKVKILPEVREKHVFLNRLKQLPLLESQIATIEQSLFSNVQYFAHYCRKYAPLAAEAKRVFSLEKKMSNYIQFKSKCRIEPVCLLLHGSPGA--------------------KSVATNLIGRSLAEKLNSSVYSLP---YKQQAVVIMDDLCQNPDGKDVS--------MVSSVDFVPPMAALEEKGILFTSP-----VLASTNAGSINAPTVSDSRALARFDMNIEVISMYSQNGKINMPMSVKTCDEEC--------PVNFKRCCPLVCGKAIQFIDRRTQVRYSLDMLVTEMFREY--HSVGATLEALFQGPPVYREIKISVAPEDLLKSVDSEAVREYCKEKGWLVPEVNSTLQIEKHV---SRAFICLQALTTFVSVAGIIYIIYKLFAGFQGAYTGIPNQKPKVPTLRQAKVQGPAFEFAVAMMKRNSSTVKTEYGEFTMLGIYDKWAVTILMNDQEVGVLDAKELVDKDGT.................................................................................................................. 1999
6 -11.400IDP91916 spermidine/putrescine ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100001122 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  675VTTHDNKTTRLAVSSVEEVVVDGKTLYKVVAKAPDLVQRREDDTLSEEYVHYFEKQLPKVDNVYYSFNELITDMNPTGTFKLGADLNAANTPTPSKSYVTGEFKGKLSSQHYTIHNTARPLFNNIVGGTVKNINLNN-----------VNIDMPWADQIASVANVIKGGSLIENVKVKGNVLGRNWVSGFIDKIDSGGRLVNVAFIGNVTS-----VGDGDKFLT-----------------------GIVGENWKGYVEKAYVEANIKGKRAKSYWSQNSGDNNAVGRDGAIKKSVVKGSIDVEKPIEVGGAVGSLNYLGYIEDTVAMMKVKNGEIFEGKSSYTYSKQQKRIKSISQEEADKKIKELGITADKFTIIDPIVNKLNNIKQKADTYKDTQDYKADRELTYRNIEKLQP---YNKEWIVDQGNKVPS-------------NSKLLTTEVLSVTGIKSGQFVTDLSDIDKIMIHYSDGAKEELNVTRQESNVQQVREYSITDLYTPNMVEKDRAQL------------------------------------MTDVKSKLSSVELQLLVKRDTKKDANANSVGRQNYIRDLFLEES------FSEVKANLDKLVKQILENEDHQLNDNELALLKKVEDNKAKIMMGLAYLNQYYAFKYDELSIKDIMMFKPDFYGKTASVIDRLI--NIGSAENNLKGDRTQDAYRGIISGATGKGS---LHDFLTYNMKLFTNVWFKKAIEKN-------------------------AYVVEQPSTNPAFANKKYR-----YEGNNGQHGRMILPLLNLKNISTYNTISFSSFEKYGKDTDEKREKFKSEINKRAKEQVNYLDFWSRLATDNVRDKLLKSQNVVPTPVWDNHNSPNGWASRHGHIDGKPDYAPIREFFINKYHGYKYGYGAYAYIFAAPQPMVYFVMTDLISDFGTSAFTHETT--GHWHREGEAFAQGMLQTPSVS------GLNMAYERQNDGNQWYNTNPNDLT-TRAEIDNYMKGFNDEGEAVLNKANQDLN-RGASTKNQYDKVRDLTADE-KNITLNSVDDLVDNNFMTKHGPGNNVYDPTGFGTAYVTVPI--AGIYGGNTSEGGSMSFKHNTFRMWGYYGGFLLKNESRQAGHNTLGDDFIIKKVSDNKFSTLEDWKKAYFKEVVDKAKAGFNPVTIDG----------------TTYSSYDDLKNAFAAA------------EKDKATLKNGSVKSDN------TVALKEKIYKKLLQQT--------------------DSFKTSIFRMKKTSSKLFVVPYMLWIALLVLIFGQSFFNIEGQFSLENYKSYFASQN-MSFNSVYAGIVTFVTLLISYPTALFLTRLK----HRQLWLM............................................................................................................................................................................................ 1998
7 -9.830IDP00168 gene: vibF; nonribosomal peptide synthetase VibF, authentic frameshift VC2209 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  38..............................................................................................NRQALTEAVRALYAK---------HPMLRLAITKDGKVDDLSQWKPDEVESFVHTKRQRMTHQMLDLLPEGKHRLHIDADMIACDAQSFRLLVDDLTSLYLEAIEHRLEIIESDVVTFFQYLDAQQADRALAKRKEVDKKWWQERLATIPATDAVSANSQRFAHWFTPVERKGLAEVARQHHLTLTQLTLALFSQVIANACQERQFRLNVPTFHRGNRSLDIEHTIGDFSNLL-QTLLSLCQQTANQLHQLLRHESYSKQGGVQRSPIVFTSGMEMRDEEIFSDHVTQHLGRMNWVISQGAQVTLDAQIAPAYEGILLNWDVRMENFADKDITALFAHYVDLIRCVALHPEMMQQSTPLQQAYLLGRSTQIARGHIDTQSLHSRLLYLVEH-----IPALRTRIDQEKWIQWVSPCIALNWQAIDLQHLSREQALLAV-----EPVRQQYQQRMHDLTRSPWQICVVQLP-VLTSFDALIVDGRTHALILAALLGSEEPDITQVVQNARDTQSISPQFASKKAQDE--AYWKSKLHPTTSRYARESLQIPKESVGKLNRCGIENGLFLNSLLTATILDVLSYWTTEIGMRVGFESSFVEHEKSTLSLLSQASKLQREMLEALEH-LAFSGVDLNRLLMNLVLPVVLTNGLSWKTTQTPQVALDIRLTYDEQKNLIISFDYALAVLETELIREMLSALHHR----LSQITSSASLAAPLEPCIDLSHYRFNSDESASHDCDFLAKLAQQLFVRTEICGEQTLSYAQLGEQVQRVMWQLKARGLTTGNVLAICLPRSVEHIVIS-SGIIWVPIDAASPKERLNYLLENCYTSG-TTGKP-KCVVVNNQATSNVIGQTGQAWHLTSED---VVMSVTPLHHDMS---------FDLFATLSFGATLVLPAGHEEKDALQWNRLIERHQVTIWVSVPAILE----MLLSCTQAGQLHSLRLIAQGGDYIKPATIAQLRAGSNPP----------RLISLGGPTETTIWSIWHEIMDEIQRHVPQGVVGRGVNLGYLEDGELKYRADGNIIFASRINGYRGVRVSLPDIEKQLQLASVVVVDYADTNGDTALAALFSVKPQQSASSQALREFAKQSLPSSHIPSRFIALEAL---LSANGKVDRKQSISVEPVGQPNQSQPLSPPTLSSASLSEFEQRVWRQHQRHGDGRNQYATAYRLSGKVNIARLITALSQLPNHFPVLNRRYVLDEASGLT..................................................................................................................................................................................................................................................................... 1486
8 -9.540IDP91642 peptide synthetase MBTF (peptide synthase) [Mycobacterium tuberculosis H37Rv] NP_216895 [Mycobacterium tuberculosis H37Rv]  ali follow..  11  62..............................................................................................DIALLRDCAAAMLTR---------HPNLRASHGNLSRPVQVIPSSAEVLWRHVRAHPSEVGALAAEERRRRFDHLVIVAHHIVIDGWSLPLFVSELLALYRAGGHVAALPAARPYRDYIGWLAGRD-HLNGLDGPTLLSPALADTPVQPGIPGRTEVRLDREATAELADAARTRGVTISTLVQMAWATTLSAFTGRGDV-------TFGVTVSGRPSELSGVETMIGLFINTV-ATVGGQCAVLQRQFAMLRDHSYLGFNEFRAIDTLLVYENFPPGEVVGTAEFVANGVTFRPVALESLSHFPVTVAAHRSTGELTLLVEVLDGALGTMAPESLGRRVLAVLQRLVSRWDRPLRDVDILL--------------------DGEHDPTAPGLPDVTTSAPAVHTRFAEIAAAQPDSVAVSWADGQLTYRELDALADRLATGLRRADVSRETPVAVAL--SRGPRYVAAMLAVLKAGGMIV------PLDPAMPGERVAEILRQTSAPVVIDEGVFAASVGADILEEDRAI---TVPVDQAAYVIFTSGTTGTPKGVIRALSAYADDHIERVLRPAAQR-LGRPLRIAHAWSFTFDAAWQPALLDGHAVHIVDDHRQRDAGALVEAIDRFGLDMIDTTPSMFAQLHNANCYGPTETT---EAVVAAVAEHARPVIGRPTCTTRAYVMDSWLRGLYLAGAQLTRGYLRPAETAARFVAEPNG-RGSRMYRTGDVVRRLPDGGL-------GRSDDQVKIRGFRVEPGEIAAVLNGHHAVHGCHV-----TARGHASGPRLTVAGGPQPPPVAELRAMLLERLPRYL-DELPLTPHGKIDENALEGPATPPQTPTELVLAEAFADV---ETSNVDVTAGFLQMGLDSIV---ALSVVQAARRRGIALRA-----------RLMVECDTIR-----AAAIDSDAAWQAPANDAGEPIPVLPNTHWLYEYGDPRRLAQTEVIRLPDRI----------------TRERLDAVLAAVVDGHEVLRCRFDRDAMALVAQPKTDI--GELVTAVAEQTLGALASLDPQAGRLLSAVWLREPDGPGVLVLTAHVLAMDPVLGELDAGLHALAAGRAPSPARENTSYRQWSRLLAQRAKALDSVDFWVAELEGAD--PPLGARRVAPQTDRVGELAITMSISDADLTARLLSTGRSMTDLLATAAARMVTAWRRQRGQQT------PAPLLALETHGR-------------ADVHVDKTADTSDTVGLLSAIYPLRIHCDGATDFARIPGSGIDYGLLRYLRADTAERLR-YLGSLHVGVGDLAVDRALLADVGQLPEPEQPVRHELTVLAALLGPADAPVLATRWRTLPDILSADDVATLQSLWQGALAEITA........................................................................................................... 1461
9 -9.070IDP95089 yersiniabactin biosynthetic protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002920248 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  11  55LMRWLHWFRKNGYRLTLRELYAAPTLAAWNQLMLSRSPENAEEETPPDESSWPNMTESTPFPLTPVQHAYLTGRMPGQTLGGVGCHLYQEFEGHTASQLEQAITTLLQR---------HPMLHIAFRPDGQVHDLRHNDAESRQAYLDALRQRLSHRLLRLLPDNRHRLHVNIDLLIMDASSFTLFFDELNALLAGESLPAIDTRY----DFRSYLLHQQKI-RAYWLAKASTLPPAPVLPLAEPATLREVRNTRRRMIVPATRWHAFSNRAGEYGVTPTMALATCFSAVLARWGGLTRLLLNITLFDRQPLHPAVGAMLADFTNILLLDTACDGDTVSNLARKNQLTF-TEDWEHRHWSGVELLRELKRQQ--LYSSRAESPLGEPEWGISQTPQVWIDHLAFEHHGEVWLQWDSNDALFPPALVETLFDAYCQLINQLCDDESAWQKPFADMSQRAIRERVNATGAPIPEGLLHEGIFRIALQQPQALAVTDMRYQW------NYHELTDYARRCAGRLIECGVQPGDNVAITMSKGAGQLVAVLAV-LLAGAVYVPVSLDQPIYADASVRLVEAEPIANPVVRAPTQPAYIIYT-STGTPKGVVISHRGALNTCCDALSALHFDLSVYDIFGVLRAGGALVMVMENQRRDPHAWCELI-----QRHQVTLWNSVPALFDMLLTWCEGFADATPENLRAVMLSGDWIGL--DLPARYRAFRPQGQFIAMGGATEASIWSNACEIHDVPAHWRSIPYNQRYRVVDEQGRDCP-GELWIGGIGVEGY-YRTGDLGCGTIEFLGRRDKQ-GEI-ALSQLAGVKQATVLAIGEKEKTLAAYVVPQGEAFCVTDHRNPALPQAWHTLAGTLPCCAISPEISAEQVADFLQHRLLKLKPGHTAGADPLPLMNSLAIQPRW-AAEGYQVCAGEEREDEHFSGHDLTLSQILRGARNELSLQRLQRPIRLLEVGTRTGRLSTLLLTNGQPEALLHNSADWAALFSAAAFNQAALAGRLPGWMVP-QRIVFLDALPLTANGKI-DYQALKRRHTPEAENPAEADLPQGDIEKQVAALWQQLLSTGNVTRETDFFQQGG--DSLLATRLTGQLHQAGYEAQLSDLFNHPRLA-YQPFALTDVQQAYLVGRQPGFALGGVGSHFFEFEIADLDLTRLETVWNRLIARHDMLRAIVRDGQQQVLEQTPPWVIPA-HTPEEALRVREKLAHQVLNPEVWPVFDLQVGYVDGMPALVELEHGYRYPQQLLPPLPVTFRDYLQQPSLQSPNPDSLAWWQAQLDDIPPAPALPLRCLPQEVETPRFARLNGALDSTRWHR-----LKKRAADAHLTPSAVLLSVWST-----VLSAWSAQPEFTLNLTLFDRRPLHPQINQILGDFTSLMLLSWHPGESWLHSAQSLQQRLQNLNHRDVSAIRVMRQLAQRQNVPAVPMPVVFTSALGFEQDNFLARRNLLKPVWGISQTPQVWLDHEGELRFNW-----------DFVAALFPVGQVERQFEQYCALLNRMAEDESGWQLPLAALVPPVKHAGRVCPEQSQPHIAADESTVSLICDAFREVVGESVT. 1965
10 -8.990IDP91906 zinc metalloprotease ZmpB [Streptococcus pneumoniae str. Canada MDR_19F] SpneCMD_010100004020 [Streptococcus pneumoniae str. Canada MDR_19F]  ali follow..  707............APDLVQRREDDTLSEEYVHYFEKQLPKVDNVYYSFNELITDMQK------------------NPTGTFKLGADLNAANTPTPSKSYVTGEFKGKLSSQHYTIHNTARPLFNNIVGGTVKNINLNN-----------VNIDMPWADQIASVANVIKGGSLIENVKVKGNVLGRNWVSGFIDKIDSGGR-------------------VNVAFIG----NVTSVGDGDKFL---TGIVGENWKGYVEKAYVEANIKGKRAKAAGISYWSQN-DNNAVGRDGAIKKSVVKGSIDVEKPIEVGGAVGSLNYLGYIEDTVAMMKVKNGEIFEGKSSYTYSKQQKRIKSISQEEADKKIKELGITADKFTIIDPIVNKLNNIKQKADTYKDTQDYKADRELTYRNIEKLQP---YNKEWIVDQGNKVPS-------------NSKLLTTEVLSVTGIKSGQFVTDLSDIDKIMIHYSDGAKEELNVTRQESNVQQVREYSITDLYTPNMVEKDRAQL------------------------------------MTDVKSKLSSVELQLLVKRDTKKDANANSVGQNGYIRDLFLEES------FSEVKANLDKLVKQILENEDHQLNDNELALLKKVEDNKAKIMMGLAYLNQYYAFKYDELSIKDIMMFKPDFYGKTASVIDRLI--NIGSAENNLKGDRTQDAYRGIISGATGKGS---LHDFLTYNMKLFTNVWFKKAIEKN-------------------------AYVVEQPSTNPAFANKKY---RLYEGINNGQHGRMILPLLNLKNISTYNTISFSSFEKYGKDTDEKREKFKSEINKRAKEQVNYLDFWSRLATDNVRDKLLKSQNVVPTPVWDNHNSPNGWASRHGHIDGKPDYAPIREFFINKYHGYKYGYGAYAYIFAAPQPMVYFVMTDLISDFGTSAFTHETT--GHWHREGEAFAQGMLQTPSVS------------NPNGEYGALGLNMAYERQNDGNQWYNTNPNDLTTRAEIYMKGFNDTLMLLDYLEGEAVKANQDLNNAWFKKVDKQLRGASTKNQYDKVRDLTADEKNITLNSVDDLV--DNNFMTKHGPGNNGSMSFKHNTFRMWGYYGGFLLKNESRQAGHNTLGDDFIIKKVSDNKFSTLEDWKKAYFKEVVDKAKAGFNPVTIDG----------------TTYSSYDDLKNAFAAA------------EKDKATLKNGSVKSDN----------TVALKEKIYKKLLQQTDSFKTSIFR...................................................................................................................................................................................................................................................................................................... 1902

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24