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Query: [S] COG5291 Predicted membrane protein, from VFDB

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPSIPQMNNTFLLGQMLRVPPITRYMTLLISAVALLVYVDAVSPYSLYYSPLFLKRLEIWRVFTSFLYFGKPTLDMFMHVVFLYRYSRMLEEGCVNTSEYFWLILVISSVLFAISNIYGISALGTSFSATITYIWTKRNPRAIVQIFGFISFPAFYLPFILPGFMLLSRRSISIDDVLGIVVGHLFHYFKDVYPRWGRDILSTPCWVKKLFNEHPSSCCKARKGITIREGRERHERNMGYSNASTTSGDSMASLTDMADTKSSTENSAVTEESQCCAESFKDSSVVSSQKSMAVSTVVGSSTEAKNNYLDFTEALCDKEVVAEQNPESQSNEEWDEKWGDSDNESECSLast
1 -15.400IDP04254 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1823 [Clostridium perfringens ATCC 13124]  ali follow..  13  22...................................................................................................................................................................................................................GCFNISPIKKVKAETFGIENTIAKGGRSSGGGSRSSSRSSGSSSRSSSKSSSYNSSKKYSKPSSSSSEKKKSQGNSNYSTTDKFNKPSSGSNSSSDKVESGKDSSNSDKGSKQGNNNYSTTDKFNSKAPNNQEGSSK 158
2 -14.600IDP92694 TpgX protein [Staphylococcus aureus subsp. aureus ST398] YP_005735174 [Staphylococcus aureus subsp. aureus ST398]  ali follow..  2  16..................................................................................................................................................................................................................................................AACGQDSDQQKDSNKEKDDKAKTEQQDKKTNDSSKDKKDNKDNSKDVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSNSGQTTNNQKSSYVAPYYGQNAAPVA 121
3 -14.100IDP05007 putative lipoprotein [Bacillus anthracis str. Ames] BA_3383 [Bacillus anthracis str. Ames]  ali follow..  6  1..................................................................................................................................................................................................................MKMKKVAIASITIGTMLTMAACSPSADKETDKKEQVTAQNEGEVKTTSTDETSKTTKDTDKETNTSSNEKTDKDAKNTKESSGTESNGKTSTQNENVKTKEKETTGKTNDQTTSGKTTDQSTSTNSDGKTTKDPKKSV 138
4 -11.900IDP05372 LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_0397 [Bacillus anthracis str. Ames]  ali follow..  5  63...................................................................................................................................................................................................................DSGSDGNGSDGSGSGDNGSGDNGSGGNGSGGNGSGENGSGGNGSGSSGSGDNGSGGNGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGGNGSGGNSSGGSGSGGSGSQGGNRVKG 199
5 -11.100IDP05727 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_4605 [Bacillus anthracis str. Ames]  ali follow..  11  40.............................................................................................................................................................................................................................................................................VPDTKEQASSSDKKVSQQTTKENKSEKAKGKEETKKNEQEKTEAKKKEEEKLKAEEEQKKAEEEAKANEKVPAEKTQPK 118
6 -10.900IDP05315 cell wall anchor domain-containing protein [Bacillus anthracis str. Sterne] BAS0383 [Bacillus anthracis str. Sterne]  ali follow..  8  1.................................................................................................................................................................................................................MTKIFILASTLSLSFFSGLNIGNAATENFSPITNAIVQNNDYFVEGNSKDNNKPPGNGGSQDDSGSDGNGSDGSGSGDNGSGDNGSGGNGSGGNGSGENGSGGNGSGSSGSGDNGSGGNGSGGNGSGSSGSGENGSGGN 139
7 -10.800IDP92613 RecName: Full=Serine-rich adhesin for platelets; AltName: Full=Staphylococcus aureus surface protein A; Flags: Precursor SAOUHSC_02990 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  10  88....................................................................................................................................................................................................................AFAASDAPLTSELNTQSETVGNQNSTTIEASTSTADSTSVTKNSSSVQTSNSDTVSSEKSEKVTSTTNSTSNQQEKLTSTSESTSSKNTTSSSDTKSVASTSSTEQPINTSTNQSTASNNTSQSTTPSSVNLNKTS 223
8 -10.700IDP05521 putative cell surface protein [Clostridium difficile 630] CD1858 [Peptoclostridium difficile 630]  ali follow..  11  13...............................................................................................................................................................ILGAVLLIVG-------VISLFAGSKIVFAQGGLFTTLVNPIEAVA--EKVFKEEKIKAEKGRLLDSGDLPIIPDDMKFIDDFLFYEVKGDGKDEIIRKVTKIDVKDKETQTENESSKSEQSSQSNASKIENKGTQTELSKDDISKMEKESKELKEKLDKLNQEIKDKDKLSEKQKDKIKDLEEKIDKL 209
9 -10.700IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  10  21.....................................................................................................................................................................................................................................................................GNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFSPS 107
10 -10.600IDP91749 Q9DUM3_HHV8 [Human herpesvirus 8]  ali follow..  2  43...................................................................................................................................................................................................................PRRKHVADSVDGRECGPHTLPIPGSPTVFTSGLPAFVSSPTLPVASIPSPAPATPLPPPALLPPVTTSSSPIPPSHPVSPGTTDTHSPSPALPPTQSPESSQRPPLSSPTGRPDSSTPMRPPPSQQTTPPHSPTTPP 179
11 -10.400IDP06021 hypothetical protein TGME49_078860 [Toxoplasma gondii ME49] XP_002370589 [Toxoplasma gondii ME49]  ali follow..  9  266...................................................................................................................................................................................................................APGSEADDGQQTEDAQERLGKSVSEEERKKNKGEKKEKSEKKEKSEKKEKSEKKEKSEKKEKSEKKEKSEKKEKSEKKEKSEKKEKSEKKKDGANSELSAGSEGEDARKKKKKKEASRGTSLSGSDDGRKKKSGEKS 402
12 -10.400IDP05395 putative lipoprotein [Bacillus anthracis str. Ames] BA_2942 [Bacillus anthracis str. Ames]  ali follow..  12  12.............................................................................................................................................................................................................................................................................TSIFTVGLLIGCNPAPKDEKEPDPTEEPSEQRQEEKNEKQDPAKEQNNELNKKDEQEPDPTEEPSEEQKKKKENE.... 86
13 -10.200IDP92610 gene: srr-2; serine-rich repeat protein [Streptococcus agalactiae] AAZ95526 [Streptococcus agalactiae]  ali follow..  11  90.............................................................................................................................................................................................................................AEETPTATELTGNEKTLATAETVVVAPEVKTVNSDSSSHSTSESQSMSTSTLQSTSASLSASESLMDSTSASLSESSSLSEYSSLSLSSSESVSASESVQSSEAATTARVQPRAMRVVSSASDMETL 216
14 -10.100IDP02352 hypothetical protein FTT1334c [Francisella tularensis subsp. tularensis SCHU S4] FTT1334c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  9  1..............................................................................................................................................................................................................MKKVALTLITTIGLSVSPVFANEVLTNTTTQTDSYQTGKRLGQKVAQVQTNIKTTAAEVSKKLDKTSKDVEKDASQAADTLVNKSENAKKILDTKANQASQSLGQMADDAEKDTSQAATMIANKAKAAQSKLVQQTDKSKQA 142
15 -9.630IDP05117 putative collagen-binding protein [Clostridium difficile 630] CD2831 [Peptoclostridium difficile 630]  ali follow..  9  1................................................................................................................................................................................................MKKGNRKAL-----LIMILSMVVSTIYPTVSYASELGENSQIQSGSTNSSTGEEKESDNKKPEQTPEKDKATDNKKPEQTPEEEKPTDNKKPEQTPEEDKSTDNKKPEQTPEGEKPIDNKKPEQIPEEDKSTDNKKSEQALEDEKPLDNKNTEKTP 154
16 -9.480IDP04017 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1035 [Clostridium perfringens ATCC 13124]  ali follow..  10  15......................................................................................................................................................................................................................................................SGAFIGCGRNNQKEVSDNENSSNISNEEKNNKEVKNDNNDKKESKDSENDTKDNKDKNEQRDKEDLNKENMKEERDPKLDESVIVNNGIIIIPKNLKMAKIM 116
17 -9.350IDP06534 Surface protein from Gram-positive cocci, anchor region [Enterococcus faecium DO] EAN10892 [Enterococcus faecium DO]  ali follow..  14  107....................................................................................................................................................................................................................SAELSIDEIKSKDKVDLIVFYDGQMTITENLKPSSWTVVGPPSSTDSTSSESSTENTSGESSTESTSSESSTENTSSESSTESTSSESSTGSTSSESSTESTSSESSTGSMSSESSTGSTSSESSTGKVNNELDLV 242
18 -9.280IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  6  21..................................................................................................................................................................................................................................................................GQTGPLYLPDEDKLNSGSTLAKSGSSIMVKQNQQNNSTSTSDNQSDTSTKVDNDPTAPVRNNNPTTSELFEGENNFNYNNNIQNSQNAGG 110
19 -9.270IDP91672 ARP4_STRPY [Streptococcus pyogenes]  ali follow..  7  2.....................................................................................................................................................................................................................................ARKDTNKQYSLRKLKTGTASVAVAVAVLGAGFANQTEVKAAEIKKPQADSAWNWPKEYNALLKENEELKVEREKYLSYADDKEKDPQYRALMGENQDLRKREGQYQDKIEELEKERKEK 120
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.