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Query: [I] KOG1176 Acyl-CoA synthetase, from VFDB

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MANSQRSSSLIDPRNGFCTSNSTFYSKRKPLALPSKESLDITTFISSQTYRGKTAFIDAATDHRISFSDLWMAVDRVADCLLHDVGIRRGDVVLVLSPNTISIPIVCLSVMSLGAVLTTANPLNTASEILRQIADSNPKLAFTTPELAPKIASSGISIVLERVEDTLRVPRGLKVVGNLTEMMKKEPSGQAVRNQVHKDDTAMLLYSSGTTGRSKGVNSSHGNLIAHVARYIAEPFEQPQQTFICTVPLFHTFGLLNFVLATLALGTTVVILPRFDLGEMMAAVEKYRATTLILVPPVLVTMINKADQIMKKYDVSFLRTVRCGGAPLSKEVTQGFMKKYPTVDVYQGYALTESNGAGASIESVEESRRYGAVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEEEIITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIPLast
1 -88.500IDP04676 gene: dhbE; 2,3-dihydroxybenzoate-AMP ligase [Bacillus anthracis str. `Ames Ancestor`] GBAA2370 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  23  23..................................LGETFGGVLRERAEKYGDQIAVVSG--NTYITYSELDKKVDRLASGLLN-LGIKPEDRVVIQLPNVIEFFEMCFALFRIGALPVFALPSHRSSEISYFCEFGEASAYVISDKARKLAREVKEKVPTLQHVIVVGEKEEFVNISDLYI-------DPVLLPEVQPSDVAFLQLSGGTTGLSKLIPRTHDDYIYSLRVSAEICNLSAESVYMAVLPVAHNYPMSSPTFGTFYAGGKVVLATGGSPDEAFALIEKEKVTITALVPPLAMIWLDAAS--SRNNDLSSLEVIQVGGAKFSAEVAKRIRPTF-GCTLQQVFGMAEGLVNYTRLD-DPEEIIIHTQGRPMSALEVRVVD-EYDNDVKPGEVGSLLTRGPYTIRGYYKAEEHNFTNDGFYRTGDLVKVNEQGYIIVEGRDKDQINRGGEKVAAEEVENHLLAHDAVHDVAIV. 461
2 -88.500IDP01400 vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase VC0772 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  18  23..................................QDKTLLDYLQQSAERTPNALALVGD--NQQWRYQAMLERIEQLAAGFTE-LGLGCGDNVVLQLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQQALAQELLACCPTLQTVIVR--GQTRVTDPKFIELASCYSA-SSCQANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPAAHNFPLSSPALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHAE--KSTYDLSSLHFVQVGGAKFSEAAARRLPKAL-GCQLQQVFGMAEGLVNYTRLD-DSAELIATTQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNFNAQGFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALI. 465
3 -88.200IDP04093 gene: irp5; yersiniabactin siderophore biosynthetic protein [Yersinia pestis CO92] YPO1907 [Yersinia pestis CO92]  ali follow..  23  1.......................MNSSFESLIEQYPLPIAEQLRHWAARYASRIAVVDA--KGSLTYSALDAQVDELAAGLSS-LGLRSGEHVIVQLPNDNAFVTLLFALLRLGVIPVLAMPSQRALDIDALIELAQPVAYVIHGENHAELARQMAHKHACLRHVLVAGETVSDDFTPLFSLHGERQA----WPQPDVSATALLLLSGGTTGTPKLIPRRHADYSYNFSASAELCGISQQSVYLAVLPVAHNFPLACPILGTLACGGKVVLTDSASCDEVMPLIAQERVTHVALVPALAQLWVQARE--WEDSDLSSLRVIQAGGARLDPTLAEQVIATF-DCTLQQVFGMAEGLLCFTRLD-DPHATILHSQGRPLPLDEIRIVD-QDENDVAPGETGQLLTRGPYTISGYYRAPAHNAQAQGFYRTGDNVRLDEVGNLHVEGRIKEQINRAGEKIAAAEVESALLRLAEVQDCAVV. 448
4 -87.200IDP93941 yersiniabactin siderophore biosynthetic protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001006819 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  22  1.......................MNSSFESLIEQYPLAIAEQLRHWAARYASRIAVVDA--KGSLTYSALDARVDELAAGLSS-LGLRSGEHVIVQLPNGNAFVTLLFALLRLGVIPVLAMPSQRALDIDALIELAQPVAYVIHGENHAELARQMTHKHACLRHVLVAGETMSDDFTPIFSLHGERQA----WPQPDVSATALLLLSGGTTGTPKLIPRRHADYSYNFSASAELCGISQQSVYLAVLPVAHNFPLACPILGTLACGGKVVLTDSASCDEVMPLIAQEGVTHVALVPALAQLWVQARE--WEDSDLSSLRVIQAGGARLDPTLAEQVIATF-DCTLQQVFGMAEGLLCFTRLD-DPHTTILHSQGRPLPLDEIRIVD-QDENDVEPGETGQLLTRGPYTISGYYRAPAHNAQAQGFYRTGDNVRLDEAGNLHVEGRIKEQINRAGEKIAAAEVESALLRLAEVQDCAVV. 448
5 -85.300IDP91636 acyl-CoA synthetase [Mycobacterium tuberculosis H37Rv] NP_217464 [Mycobacterium tuberculosis H37Rv]  ali follow..  23  2..................................RNGNLAGLLAEQASEAGDRPAFYA---ADVVTHGQIHDGAARLGEVL-RNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSRVAEAAELMSEA-------------------ARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS----PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDE--WRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVV. 419
6 -84.600IDP91640 bifunctional salicyl-AMP ligase/salicyl-S-arcp synthetase [Mycobacterium tuberculosis H37Rv] NP_216900 [Mycobacterium tuberculosis H37Rv]  ali follow..  22  38..................................SGRTLDTVLSDAARRWPDRLAVADAPGHGGLSYAELDQRADRAAAALHG-LGITPGDRVLLQLPNGCQFAVALFALLRAGAIPVMCLPGHRAAELGHFAAVSAATGLVVADDYRPMARELVADHPTLRHVIVDGDPGPFVSWAQ----LCAQAGTGSPAPPADPGSPALLLVSGGTTGMPKLIPRTHDDYVFNATASAALCRLSADDVYLVVLAAGHNFPLACPLLGAMTVGATAVFAPDPSPEAAFAAIERHGVTVTALVPALAKLWAQSCE--WEPVTPKSLRLLQVGGSKLEPEDARRVRTAL-TPGLQQVFGMAEGLLNFTRIG-DPPEVVEHTQGRPLPADELRIVN-ADGEPVGPGEEGELLVRGPYTLNGYFAAERDNFDPDGFYRSGDLVRRRDDGNLVVTGRVKDVICRAGETIAASDLEEQLLSHPAIFSAAAV. 484
7 -76.100IDP90737 gene: menE; O-succinylbenzoic acid--CoA ligase [Yersinia pestis CO92] YPO2523 [Yersinia pestis CO92]  ali follow..  21  3...............................SLGHPPWEHWPWQYWANLRPQALAIRSG--GQRISWQQLASDINALAAFF-QQQGVVPGSGVALRGKNSYTLLLAYLAALQCAARVLPLNPQLPDALLAQRLPTLDIHFMLNLATPLPPHFAFTPLDPR------------------------TVDSAAVTPIAWDGQRLATLTLTSGSSGLPKAAVHSLGAHRANADGVLALMNFTASDSWLLSLPLFHVSGQGIVW-RWLTAGATLGVPEGVPLVEALA-----GCSHASLVPTQLWRLLANAA------PPLTLKEVLLGGAMIPTELTEQAEAH--GIRCWCGYGLTELASTVCAKRAD----GRPGVGVALAGRQVKLVD------------DEVWIKADCLAAGYWQQGQLLTDSDGWFHTRDRGRWQ-QGELCILGRLDNLFFSGGEGIQPEDIERVLLQYSGVQHAFVIP 394
8 -72.000IDP90633 O-succinylbenzoic acid--CoA ligase [Vibrio cholerae O1 biovar eltor str. N16961] VC1971 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  1................................MALGIFPVSLWQPWLERDPKQVALSHA--GQTLTWQVLDSQVAHYAKAL-REQGVRSGEVVTLVGKNHLHTVLWFLACTQVGALCAFLAPQRLQEKLATLYAEQSPKHLXLAPSCALSEEDITALN---------------AHRLSLPDERDESVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLNKFAFTESDSWLLSLPLYHISGVA-ILYRWLAVGATLKIGTGDLQNDI------AGVTHASLVPTQLKRLLDSS-------SPLTLKRVLLGGSHIPVELAQMAATR--GIDTWLGYGMTEAASTVTAKRV----DGLAGNGELLEHRELRLVD------------GRIFIAGKTLAQGYYRQGQLVTNEQGWFDSKDLGRWQGNN-LLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVIP 401
9 -67.400IDP95302 RecName: Full=Long-chain-fatty-acid--AMP ligase FadD32; Short=FAAL; AltName: Full=Acyl-AMP synthetase B2HMK0 [Mycobacterium marinum M]  ali follow..  20  11............................GKIRFPENTNLVRHVEKWARVRGDKLAYRRDGVERDILWSEFSARNRAVGARLQQV---QPGDRIAILCPQNLDYLISFFGALYSGRIAVPLFD-GHVGRLHAVLDDCTPSTILTTTDSAEGVRKFIRSRSAKERPRVIAVDA-----------VPTEVASTWQQPEANELTTAYLQYTSGSTRVPSGVQITHLNLPTNVLQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTFMTPA-RPGRWIRELARKPGETFSAAPNFAFEHAGVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFKAFEPYAVKPSYGLAEATLFVSVAADAPNAVAQVSAGKVGVDEWAVIVDTETASELPDGQIGEIWLHGNNLGIGYWGKEEESAQDGLWVRTGDYGTY-FKGHLYIAGRIKDLVIIDGRNHYPQDLEYTAQETKALRVGYVA. 516
10 -67.100IDP91652 long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis H37Rv] NP_218318 [Mycobacterium tuberculosis H37Rv]  ali follow..  19  19............................GKIRFPANTNLVRHVEKWAKVRGDKLAYRRDGVARDILWSDFSARNRAVGARLQQV---QPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFD-GHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDA-----------VPTEVAATWQQPEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTFMTPA-RPGRWIRELARKPGETFSAAPNFAFEHAGVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYAVKPSYGLAEATLFVSVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTGYWGKEEESAQTALWVRTGDYGTY-FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQETKALRVGYAA. 524
11 -67.000IDP92555 Long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6] VV1_0649 [Vibrio vulnificus CMCP6]  ali follow..  21  4..................................LDFHIVKRIRKQIAQGAERVALKHKVGAQGISWKQFGQQIDELSLALLA-QGIEVQDKIAIFSNNMPQWTVADFAALQLRAVTVPIYPTNTAAQAAYILQNADVKVLFVEQPQFDAAVKIFDECEQLNLIVAMSDDGEHHFAIHWKAFIQQGQQEARAEEQANFEDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDRRLSLTENDVSLCFLPLSHVFERAWTFYV-LYKGGTNCYLQ--DTMQVRDALSDIKPTVMCAVPRFYEKIFSAIHEKVSRAP-GNINFMPCGGAKLDETIGRFFHA---GINVKLGYGMTETTATISCWDD--KCFNPDSIGMSMPGAQVKI-----------GENNEILVRGPMVMRGYYKLPEETFDEHGFLKTGDAGHIDEHGNLFITDRIKELMKTGGKYIAPQMIEGAIGKDHFIEQIAVI. 493
12 -65.900IDP95303 gene: fadD32; Fatty-acid-CoA ligase FadD32 [Mycobacterium smegmatis str. MC2 155] AFP42651 [Mycobacterium smegmatis str. MC2 155]  ali follow..  18  11............................GQIKFPDGSSIVAHVERWAKVRGDKLAYRRDGVPRDLTWAQFSARNRAVAARLQQV---QPGDRVAILCPQNLDYLVAFFGALYAGRIAVPLFD-GHVGRLHAVLDNCHPSAILTTTEAAEGVRKFFRTRPANQRPRVIAVD----------AVPDDVASTWVNPDEPDETTIAYLQYTSGSTRIPTGVQITHLNLATNVVQVIEALEGEEGDRGLSWLPFFHDMGLITALLAPMIGHYFTFMTPA-RPERWIRELARKEGDTISVAPNFAFDHAAAPKPGSPPLDLSNVKAVLNGSEPISAATVRRFNEAFGPFAIKPSYGLAEATLFVSVDADSPKAVAQASAGKVGIAEWAVIVDAESATELPDGQVGEIWISGQNMGTGYWGKPEESVATATWVRTGDYGAF-YDGDLYITGRVKDLVIIDGRNHYPQDLEYSAQESKAIRTGYVA. 517
13 -65.600IDP91647 acyl-CoA synthetase [Mycobacterium tuberculosis H37Rv] NP_217446 [Mycobacterium tuberculosis H37Rv]  ali follow..  20  3.................................VTDRSVPSLLQERADQQPDSTAYTPKGFADSLTWSQVYSRACIIAEELKLC---LPGDRVAVLAPQGLEYVLAFLGALQAGFIAVPLSTGIHDDRVSAVLQDSKPVAILTTSSVVGDVTKYAASHDGQPAPVVVEVDL-----------LDLDSPRQMPAFSRQHTGAAYLQYTSGSTRTPAGVIVSHTNVIANVTQSMYGYFGDPTGTVVSWLPLYHDMGLILGICAPLVARRRAMLMSPMRPARWMQLLATSGRC-FSAAPNFAFELARTSDQDMAGLDLRDVVGIVSGSERIHVATVRRFIERFAPYAIRPSYGLAEATLYVACGTDGSVGTELISYGSPD-PSSVRIVNPETMVENPPGVVGEIWVHGDHVTMGYWQKPKQTAQVGPWLRTGDLGVI-SDGELFIMGRIKDLLIVDGRNHYPDDIEATIQETGGRAAAIAVP 497
14 -64.300IDP91644 long-chain-fatty-acid--[acyl-carrier-protein] ligase [Mycobacterium tuberculosis H37Rv] NP_215861 [Mycobacterium tuberculosis H37Rv]  ali follow..  18  2....................................SELAAVLTRSMQASAGDLMVLETSLWCRHPWPEVHGLAESVAAWLLDH---DRPAAVGLVGEPTVELVAAIQGAWLAGAAVSILNDQRWADATLTRFLGIGVRTVLSQGSYLARLRSVDTAGVTI-------------------GDLSTAAHTNRSATPVASEGPAVLQGTAGSTGAPRTAILSPGAVLSNLRGLNQRVGTDATDVGCSWLPLYHDMGLAFVL-SAALAGAPLWLAPT-SPFRWLSWLSDSGAT-MTAAPNFAYNLIGKYARRVSEVDLGALRVTLNGGEPVDCDGLTRFAEAMAPFAVLPSYGLAESTCAVTVVIDGSGAHKHAVLGNPIPGMEVRISCGDQAAGNASREIGEIEIRGASMMAGYLGQQPID--PDDWFATGDLGYL-GAGGLVVCGRAKEVISIAGRNIFPTEVELVAAQVRGVREGAVV. 446
15 -63.700IDP92124 long-chain-fatty-acid-CoA ligase, putative [Toxoplasma gondii ME49] TGME49_110150 [Toxoplasma gondii ME49]  ali follow..  21  203................................................................TTYAQVDETVRALGSGLAD-LMRKDGIKVGILLQSRKEWLFTDLAVSAYPPLTVTLHYTFPAEHVKSIAEQSKLSCIVTDVDKLKLLAELKPSLGELKTIVVMSARSPLDELLSFDEVIDIGRKHPTRPVKQDPERVFTIVYTSGTTGNPKGVMLTNRNWVAVIRALHTTLGITPDFVHICYLPLSHVFERVIEYAA-LAHGVRIAFFSR-KRELIPDDWRAAQPSLVLMVPKLATTLLEKIEARLNAQP-DNMKFAACGGGKLDPAVQQKLEKYL-GLNIIQGWGMTETAGAGSWQAY-RGDDAYDSVGGPTACMEVKVRSESYDATRAERPQGELLVRGDNIFAGYFRQKELTAEKKPWLLTGDVVEIQPNGSMNIIDRKKSLIKLAGEYLQTEKLEGIYGASAFVDNIFVH. 711
16 -63.300IDP91648 acyl-CoA synthetase [Mycobacterium tuberculosis H37Rv] NP_217466 [Mycobacterium tuberculosis H37Rv]  ali follow..  22  2..................................SESSLADLLQKAASQYPNRAAYKPAGFTETVTWWQVHRRAMIVAEELWIY---SSGDRVAILAPQGLEYIIAFMGVLQAGLIAVPLPVGIHDERISSALRDSAPSIILTTSSVIDEVTTYAPHACAAQGQSAPI-----------VDALDLSSSRALDPTRFERPSTAYLQYTSGSTRAPAGVVLSHKNVITNCVQLMSDYIGDSEKTPVSWLPFYHDMGLMLGIILPMINQDTAVLMSPMRPARWMQLLAKHRAQ-ISSAPNFGFELARTSDDDMAGLDLGHVRTIVTGAERVNVATLRRFTERFAPFAIRPSYGLAEATVYVATAENGSEGANLVSYGAPR-ASTVRIVDPETRMENPAGTVGEIWVQGDNVGLGYWRNPQQTEATGPWLRTGDLGVI-FEGELFITGRIKELLVVDGANHYPEDIEATIQETGGRVVAIAVP 496
17 -63.100IDP01197 D-alanine--poly(phosphoribitol) ligase subunit 1 (D-alanine-activating enzyme) (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) BA_1389 [Bacillus anthracis str. Ames]  ali follow..  20  1....................................MKLLEQIEKWAIETPDQTAFV--WRDAKITYKQLKEDSDALAHWISSE-YPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIPVDLSIPADRVQRIAENSGAKLLLSAAVTVTDLPVRIVSEDNLK-----------------DIFFTHKGNTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTQWAVEDFNLQTGQVFLNQAPFSFDLSVM--IYPSLVTGGTLWAIDK-RPKDLFASLEQSDIQVWTSTPSFAEMCLMEAS--FSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEEVLDQYKVGYCKSDCRLLIMK-EDGTIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAERAYKTGDAGYV-ENGLLFYNGRLDFQIKLHGYRMELEEIEHHLRACSYVEGAVIVP 430
18 -61.700IDP92019 long chain acyl-CoA synthetase, putative [Toxoplasma gondii ME49] TGME49_047760 [Toxoplasma gondii ME49]  ali follow..  19  160.................................SPATSPSKDCTSGLQSTPSAPSFGESCRKSCLSYQETLKQVQSLAWALSNAEVQENYRFAGIWARSSAAWRITDYACNAAKIVSVPLYDTLGHEALLYIIGLTKLQVLFVEAKLHPALNLVTEEKVPLKAVICFDSVTPEEKLYAFDDLIHKGMGEKHERPELSLDDVCTVIFTSGTTGVPKGVVHTNGGFVATIAGYVGCNNLRRGDVTLSYLPQSHVYQRGVEIIL-THLGVGIGYYSG-DITRVVEDIQRLRPTVFFGVPRVYTRMLDKILSGVSEKS-GRLKTLCMGSAPMKAEAIVMLQMLL-GAPVCEGWGMTETGICFLQDL---EDNEKGTIGGSFPSLEFKIVSLPELAYDATGATGELLVRGPSVTKRYFQDLKTTFDKDGWMRTGDVVELLPSGAPRIIDRAKNIFKLAGEYVAPERLENIFSSSPFVEQIYLH. 678
19 -61.400IDP91637 O-succinylbenzoic acid--CoA ligase [Mycobacterium tuberculosis H37Rv] NP_215056 [Mycobacterium tuberculosis H37Rv]  ali follow..  25  17........................................................................................................................................................................................ESLLGALRVGEQIDDDVALVVTTSGTTGPPKGAMLTAAALTASASAAHD--RLGGPGSWLLAVPPYHIAGLAVLVRSVIAGSVPVELSAGFDVTELPNAIKRLGSRYTSLVAAQLAKALTDPA---ATAALAELDAVLIGGGPAPRPILDAAAAA--GITVVRTYGMSETSGGCV------------YDGVPLDGVRLRVLA-----------GGRIAIGGATLAKGYRNPVSDPFAEPGWFHTDDLGALEDSGVLTVLGRADEAISTGGFTVLPQPVEAALGTHPAVRDCAVF. 287
20 -59.000IDP92123 long-chain-fatty-acid-CoA ligase, putative [Toxoplasma gondii ME49] TGME49_110080 [Toxoplasma gondii ME49]  ali follow..  18  89.................................GWWHSAYGVFRVGKSRAGGGARCMGARPLPTWTFDEADEKARLLGSGLTETRNGGKFANVGILLHSRREWILTDLAISAYPPLTVTLHYTFPPDHMKAILLEAGMPDAETDVEQLKVVNELKADLPLLRGLVVVNLAEETAQVFDFQDILEKGRRAIPPIMEQDPERIFTIVYTSGTTGNPKGVMMSNRNFVREIQGCLHINDLDDDFLHFALLPLSHVFERMVEYVA-YGFGAAVAYFSR-KKELLADDWRFARPSCLIMVPRVAALVLDSIETQMQQLP-GRIRFLLSGGGKLNPDVQEKLEAYL-ATSFLQGWGMTETSGAGCWQARAG-DGSLDNAGGPSAVMEMKLRSEEYDAERMERPQGELLVRGENVFEGYFRQKAMTIWRSRWLATGDIVEIQPNGSIKIIDRKKSLIKLAGEYLQTEKLESIYGRSAFVDNIFVH. 722
21 -58.600IDP95248 acinetobactin biosynthesis protein [Acinetobacter baumannii ATCC 17978] YP_001085412 [Acinetobacter baumannii ATCC 17978]  ali follow..  18  4.................................................................................LRKQDLATGSVVAICLRKSPEHIYTALACALTGIIWLPVDMDSPPSRLNYLLTNSRADVVVSDSSIAGVRN------------------------LNINEILSATTEYEPSFNAEINRRPAYYLYTSGSTGTPKCVVLNNQATENTLQQTISEWKITTDDVIMAVTPFHHDMSVF--VFASMAVGATLVVPSF-NAVVWANLVDRCKVTIWSSVPAIVDMLFSVAQKV----QLQSLRLIAQGGDYIKPSLIAKLRQQLPNARLFSLGGPTETTIWSIWHEINEQDQEIIPYGKALENNRYFILD-ENLKPCQMGEVGTMYMAGLNLSNGYLLDGEINYKDQTAFRMSDQGYFREDGNIIFAGREEGYLKIKGVRISAAEVENTLTKNPYIHNCVVI. 384
22 -57.700IDP95089 yersiniabactin biosynthetic protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002920248 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  18  531CDDESAWQKPFADMMPASQRAIRERVNATGAPIPEG-LLHEGIFRIALQQPQALAVTDM--RYQWNYHELTDYARRCAGRLIEC-GVQPGDNVAITMSKGAGQLVAVLAVLLAGAVYVPVSLDQPAARREKIYADASVRLVLICQHDASAGSDDIPVLAWQQA---------------------IEAEPIANPVVRAPTQPAYIIYTSGSTGTPKGVVISHRGALNTCCDINTRYQVGPHDRVLALSALHFDLSVY--IFGVLRAGGALVMVME-DPHAWCELIQRHQVTLWNSVPALFDMLLTWCEGF-ADATPENLRAVMLSGDWIGLDLPARYRAFRPQGQFIAMGGATEASIWSNACEIHDVPAHWRSIGFPLTNQRYRVVD-EQGRDCPDWVPGELWIGGIGVAEGYFNDPLRSEQQERWYRTGDLGCYWPDGTIEFLGRRDKQVKVGGYRIELGEIESALSQLAGVKQATVL. 991
23 -55.300IDP02156 gene: acs; acetyl-CoA synthetase [Yersinia pestis CO92] YPO0253 [Yersinia pestis CO92]  ali follow..  21  80........................................NCLDRHLAERGDQTAIIDPNQSKTVTYKQLHHDVCQFANVL-KSLGVKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPDAVAGRIIDSHSKLVITADPLKKNVDEALKNPAITSIKNVVVFQRTGNASVWWHDLIKEASA-DCPPEEMNAEDPLFILYTSGSTGKPKGVVHTTGGLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEG-GVNRLSQVVDKHKVNILYTAPTAIRALMAEGDKAIEGTKRDSLRIMGSVGEPINPEAWEWYYNKISKCPIVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVD-NLGNPQEGVAEGNLVIT-PGQARTLFGDHERFEQTKGMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVV. 548
24 -54.800IDP00168 gene: vibF; nonribosomal peptide synthetase VibF, authentic frameshift VC2209 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  17  897......................................LAKLAQQLFVRTEDKTAVICG--EQTLSYAQLGEQVQRVMWQLKAR-GLTTGNVLAICLPRSVEHIVISLASALSGIIWVPIDAASPKERLNYLLENCHADLVVMDKPCEFGNVIAFDALIEPVLF---------------ADGVPDVTPLDQLSRLSQSQQTAYYLYTSGTTGKPKCVVVNNQATSNVIGQTGQAWHLTSEDVVMSVTPLHHDMSVF--LFATLSFGATLVLPAG-DALQWNRLIERHQVTIWVSVPAILEMLLSCTQAG----QLHSLRLIAQGGDYIKPATIAQLRAGSNPPRLISLGGPTETTIWSIWHELTADDVSVIPYGRPLAGNRYFIMD-EIQRHVPQGVVGRIFTSGVNLAQGYLEDGELKQTD--AFRTGDQGYYRADGNIIFASRINGYVKVRGVRVSLPDIEKQLQTHPALASVVVV. 1326
25 -53.900IDP92105 long-chain fatty acid CoA ligase, putative [Toxoplasma gondii ME49] TGME49_043800 [Toxoplasma gondii ME49]  ali follow..  21  46.................................RPCQSAWDLFQRGVAISGEKRCLGTRVKNADKTYREVEQLALEVGSGILSETFQQDMRFLAFYSKNREEWAICEQACNAYGITIVPL-KSSLAGEPEEAVNASRVTPETSEDAAEQTTEGAGKEEATETAGREEGKKAVAEAKDLLDQATKLGIQGLTDDVVAKLSTVSTVCYTSGTTSRPKGVLMSHGNFVATIAGAVRGPALHPEDTYLSYLPLAHVYERSLQNIL-FSLGGSVGFYGG-NTLKLLDDMQTLEPAVFSSVPRLFNRIHDRVLDSVRDKS-SKLRYMLVGSAPLDVSVHEKIEALF-STPVVEGYGMTETMAASFISIAGE--NTAGHIGGCCPCVEFCLFDISDRIDDPEHPAGELCLRGPTITPGYFRNREETFDQDGWLHSGDVAVIPGSNAVKIIDRKKNIFKLAGEYVSPEKIENVYIQAPLVAQAFVT. 632
26 -52.100IDP91641 phenyloxazoline synthase MBTB (phenyloxazoline synthetase) [Mycobacterium tuberculosis H37Rv] NP_216899 [Mycobacterium tuberculosis H37Rv]  ali follow..  22  534..................AQRAVRAALNGRTAAPSTEALHDGFFRQAQQQPDAPAVFAS--SGDLSYAQLRDQASAVAAALRAA-GLRVGDTVAVLGPKTGEQVAAVLGILAAGGVYLPIGVDQPRDRAERILATGSVNLALVCGPPCQVRVPVPTLLLADVL---------------------AAAPAEFVPGPSDPTALAYVLFTSGSTGEPKGVEVAHDAAMNTVETFIRHFELGAADRWLALATLECDMSVL--IFAALRSGGAIVVVDE-DPDAWARLIDTYEVTALNFMPGWLDMLLEVGGG-----RLSSLRAVAVGGDWVRPDLARRLQVQAPSARFAGLGGATETAVHATIFEVQDAANLPPDYGVPFPNNACRVVA-DSGDDCPDWVAGELWVSGRGIARGYRGRPELTAERRTWYRTGDLARYWHDGTLEFVGRADHRVKISGYRVELGEIEAALQRLPGVHAAAAT. 976
27 -46.400IDP91806 putative polyketide synthase PksJ (PKS) [Burkholderia pseudomallei MSHR346] ZP_04520447 [Burkholderia pseudomallei MSHR346]  ali follow..  19  474LAAPAARVADCPMLPAAERERLLALGRGPRADHARERRVHDLIDARAQQAPHAIAVSCG--GRSLDYARLKADSDALAQRLRA-CGIGAGDFVAVRLDRSTALVVGLLAVLKAGAAYVPLDPDYPDDWAAQMLGDCRPAAILTRAALAAGAHALARRVAADGPPAVIALDDAADADTHAADIAAARQAAASRAHAARAADLAYVIYTSGSTGAPKGVMVTHRALTNFLASMARRPGLHARDTLLAVTTYCFDIAAL--LFLPLVQGAHCVICDS-DGGRLRELIDAARPTVMQATPSTWEMLLH------AGWRNARRMRVLCGGDTLPDAVKARLLE--DGGEVWNLYGPTETTIWSMVAPVTAERP---SIGAPIDNTRIRIVD-AYGNPVPIGVPGELCIAGDGLAAGYLNRPDETAARERHYRTGDLARWREDGEVEHLGRMDFQVKIRGHRVEVHDIERHLARHPAIRAAAVV. 958
28 -39.900IDP91639 peptide synthetase MBTE (peptide synthase) [Mycobacterium tuberculosis H37Rv] NP_216896 [Mycobacterium tuberculosis H37Rv]  ali follow..  22  437..................................PVKTLVDLVNEQTTRTPDATAVVYE--GQHFTYHDLNEASNRLGHWLIE-QGIGSEDRVAVLLDKSPDLIVTALGVVKSGAVYVPVDPSYPQDRLDFILADCDAKLVLRTPVRELAGYRS------------------------------DDPTDADRIRPLRPDNTAYLIYTSGTTGLPKGVAVPHRPVAEYFVWFKGEYDVDDTDRLLQVASPSFDVSIA--IFGTLACGARMVIPRP-DIGYLTALLRDEGITAMHFVPSLLGLFLSLPGVS----QWRTLQRVPIGGEPLPGEVADKFHAT-FDALLHNFYGPTETVINASRFKVVGPQGTRIPIGRPKINTTMHLLD-DSLQPVPTGVIGEIYIGGTHVAYGYHRRAGLTAERSRMYRSGDLARRNADGDIEFVGRADEQVKIRGFRIELGDVAAAIAVDPTVGQAVVV. 853
29 -38.500IDP91642 peptide synthetase MBTF (peptide synthase) [Mycobacterium tuberculosis H37Rv] NP_216895 [Mycobacterium tuberculosis H37Rv]  ali follow..  19  472.....................................AVHTRFAEIAAAQPDSVAVSWA--DGQLTYRELDALADRLATGLRRA-DVSRETPVAVALSRGPRYVAAMLAVLKAGGMIVPLDPAMPGERVAEILRQTSAPVVIDEGVFAASVGADILEED--------------------------------RAITVPVDQAAYVIFTSGTTGTPKGVIGTHRALSAYADDHIEAQRLGRPLRIAHAWSF--TFDAAWQPLVALLDGHAVHIVDD-DAGALVEAIDRFGLDMIDTTPSMFAQLHNA-----GLLDRAPLAVLALGGEALGAATWRMIQQNCTAMTAFNCYGPTETTVEAVVAAVAEHAR---VIGRPTCTTRAYVMDSW--RPVPDGVAGELYLAGAQLTRGYLGRPAETAARSRMYRTGDVVRRLPDGGLEFLGRSDDQVKIRGFRVEPGEIAAVLNGHHAVHGCHVT. 887

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.