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Query: [MO] KOG1771 GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis, from VFDB

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRIWFWLAILVFRWWNALWVKTFFQPDEFYQSLEVAHHFIFRYGFLTWEWTSAIRSALHPLIFAALYRVLQVLKLDSSYFVFTNAPKLLQGTFAAILDYGTYKFALVRYGSKTANWTLACSLVSIMNAYVGVRTFSNSLETTLTSIGFYYFSYYLKYENSSPEQRKKAYSSLLGFISVAAFACFIRPTNILVWIFPLLFWNKNPQTPIKDLLSFSNVFNRFRFLYALGYGRLFGIFVLCVSLFLVNIIADRILYGRFVFPIISFFQFNVTSGLSSLYGLNAWHYYLSQALPLICGGFLPFVLLTMDLQTAGTILCVFFPYSLIGHKELRFVYPISPILLTLAGKFFSSFSSWKRAARFFFLIGLGHALVITFLCRFHQFGVMEVMPLIHSLAEKNQTGLILAPCHTTPWQSHIHSPFAENGWKFLTCEPFEKPFDETDRFYENMPTFLDKIKEWPDYLIFFEERFYSLYSYLDSRGLKYEEVQRYYNSLIPESRERAGALLVYKKLLast
1 -14.600IDP04526 putative inner membrane protein [Salmonella typhimurium LT2] STM1637_1_516 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  27....IVIFSVLIRLLF--LTDRYLWCDEAS-SVLISRHSVDN-------LFHAAFDVHPPLYYLLLHDWMILWGDSI------AAVRSLSLLFGILTVVLVIALTRWLANERTALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMMWIKTPTHN--------RYLVAYALLMTFSFYTHYFTLFTLIAHWIAVTILSCQSHKT--ACYLKLPGWWFANLAIAVAYLPWLPVLFNLLTHLAQLRAGNDIGWIPPVTWRDLPAMYWHFFTGNNGQGFPSFILWLAVGGFIGTVGRISLCLFCNLVIPVMLVFIISWWMPLFIDRYFFFSSLSIPPLLAVLLTRA-KKAVCGFWFILFTLLFGYGSYHNNPEHIDEFKPLVNYINTRHQPNDAVVVSKMFDYLSYVYYN............................................................................................. 419
2 -11.800IDP04349 putative inner membrane protein [Salmonella typhimurium LT2] STM0557_1_550 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  13....VIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIY----------------NAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVNFWLVGSANYLWTNMFIAIYILISIYLSNGKKSN-------LILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYL---------------------------LIGVFGSAIGAGV-------LLLAPGNLSRASTIQDWYNQPLAWRVLEHFSERLPSAMGAYWQVYIAFIILLFMLGAIAANVAFLASPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFI..................................................................................................................................... 351
3 -8.350IDP91390 Lipid A core - O-antigen ligase [Vibrio vulnificus CMCP6] VV1_1426 [Vibrio vulnificus CMCP6]  ali follow..  10  20LNKKFLLALAILFLVAMHFGAGLALSFNPTTWIAFSFVFALGCYQLASQQYLRYSKLTIGLFVSCLILTVPLFYANSHYMQSVS----LVGLWAGFGFFVLLQQFSFSNKYKQRLLWLVVLAVVIESFIGYYQFLPNVMASFL-ATGLIISGYLLARQPHKYNKHLSEITLLYLIPLLTVPLIVVRTGWLAAMIATLLLLPYLYRFGTKIRFWGWLGSIILGLSLSGALLQSTESNLAYTFPQALDMLIEKPFTGESAYTLYT---HNELLYWGVEGGL--------VPLLGIFLAAILVLNRIYSAKKGTRLAMFALFVPIVLHSQLEYHWLIFIILIYWVDQRVAKVKSVNFSRISKTALRIASLVVPILTTFY.................................................................................................................................. 456
4 -5.620IDP05521 putative cell surface protein [Clostridium difficile 630] CD1858 [Peptoclostridium difficile 630]  ali follow..  7  1............................................................................................................................................................................................................................................................................................................................................................MKKMKNKKAAGVILGAVLLIVGVVISLFAGSKIVFAQGGLFTTLVNPIEAVAQIKVEVEVNVKYIFEDEKVFKEEKIKAEKGRLLDSGDLPIIPDDMKFIDDFLFYEVKGDGKDEIIRKVTKIDVKDKETQTENESSKSEQSSQSNASKIE....... 151
5 -5.360IDP04528 gene: napH; quinol dehydrogenase membrane component [Salmonella typhimurium LT2] STM2257_1_289 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  9  1..........................................................................................................................................................MANRKRDAGREARAKKGWWRSHRWLVLRRISQFMVLGMFLSGPWLGFWVLHGNYSSSLLFDTLPLTDPLITLESLASGHLPATVALTGAVIIAVLYALAGKRLFVCPLNPVT-DLANWMRRKFDLNQSATIPRHIRYVLLVVVLIGSALTGTLLWALLIIALFLFDLLVVEHGWGHICPMGALYGVLGSKGVVTVTAKKREK...................................................................................................................................................... 225
6 -5.040IDP06244 SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] NP_346466 [Streptococcus pneumoniae TIGR4]  ali follow..  13  59..............................................................................................................................................................................................................................................GVGIILFTVLIRTVLL-QEAQPRIKALR-KLEQEMRKVFGVRQ----SDSLWPILIQMPVILALFQALSRVDFLKTGHFLWINL-GSVDTTLVLPILAAVFTFLSTWLSNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVAL............................................................................................................................ 223
7 -4.950IDP05252 hypothetical protein lmo2854 [Listeria monocytogenes EGD-e] lmo2854 [Listeria monocytogenes EGD-e]  ali follow..  14  46..............................................................................................................................................................................................................................................AVGIIVVTILIRLLIM-TNLQPKIKELQ-KLQQETMRLYSVNP----MMGCLPLLIQMPILLGFYQAISRTAEIKTDSFLWMQL-GNPDPYYILPVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMILFMGITLPSALAL............................................................................................................................ 210
8 -4.890IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  11  1MLKKLGILVLGSAVALSLVACGDSTKEASNEKKEEP...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 36
9 -4.720IDP95152 mucoviscosity-associated protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002920361 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  11  78.............................................................GIIFGFFLLYILSAFFSNDLVIGLEFSLRYLFLGASFYFFARFSYVLYLDKGKFINDYMHGILITGFIVAVTALTIPLAITLGQAAVVNVYYIMTQKGKK----SIPYLISFLPIVYAFLAANTRSVVIGFILALLLLLSSDKFSIVRKNFGKVLLAISGMAVFIGYIITNNAELVARLFSHAIATFYEHPILG------FNMYPHNIFFESAAETGIVGILLTVVLIGSCFYSIITNKGDVKTPVVAAMFIFLFFVSLVSLSFWMHKALFTSIALIFITYG................................................................................................................................................................... 399
10 -4.710IDP91747 Q8WLQ7_HUMAN [Homo sapiens]  ali follow..  18  14.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TERVRFLDRYFYHQEEYVRFDS---DVGEYRAVTELG-RPSAEYWNSQKDLLEQRRAEVDTYCR. 73
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;