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Query: [J] COG0009 Putative translation factor (SUA5), from VFDB

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKTKRWFVDVTDELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPSDNPLIVHIADISQLEDLTGPAPEKAKTLMKRFWPGALTLILPCKPDALSPRVTAGLETVAIRMPDHPLALALIRESGLPIAAPSANLSGKPSPTKAEHVAHDLDGRIAGIVDGGPTGIGVESTVLSCADDIPVLLRPGGITKEQIEAVIGPIHVDKGLSDQNEKPISPGMKYTHYAPTAPLAICEGSPERIQHLIQEYQQGGRRVGVLTTEEKAGVYSADYVKSCGRRAQLETVAAGLYDALRSFDENKVDFIIAESFPDTGVGLAIMNRLMKAAGGRVIRLast
1 -74.900sp|Q86U90|YRDC_HUMAN YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1  ali follow..  26  49RLPGSGAVQAASPERAGTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC--RVRVPEGLLKDLLPGPVTLVMERSEE-LNKDLNPFTPLVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEF-QDLWPQLSLVIDGGQIGDGLGSTVVDLSPGKFGIIRPGCALESTTAIL----------------QQKYGLLPSHASY........................................................................................................ 278
2 -5.940sp|O00339|MATN2_HUMAN(removed signalp:1-23) Matrilin-2 OS=Homo sapiens GN=MATN2 PE=1 SV=3  ali   14  1...................DVSEWASKAKANGI------TMYAVGVGKAIEEELQEI---ASEPTNK--LFYAEDFSTMDEISEKLKKGI................................................................................................................................................................................................................................................................ 61
3 -5.710sp|Q99707|METH_HUMAN Methionine synthase OS=Homo sapiens GN=MTR PE=1 SV=2  ali   10  24..................EAYQEQAKGLLDGGVDILLIETIFDTANAKAALFALQNLFEEKYAPR--PIFISGTIVDKSGR---------------------TLSGQTGEGFVISVSHGEPLCIGLNCALGAFIEIIGKCTTAYVLCPNTFGDYDETPSMMAKHLKDFAMDGLVNIVGGCC--GSTPDHIREIAEAVKNCKPRVPPATAFEGHMLLSGLEPFRIGPYTNFVNIGER.............................................................................................................. 227
4 -5.580sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo sapiens GN=TATDN2 PE=1 SV=2  ali   16  113.......CHPHFARYYSESQERNLLQALRHPKAVAF--EM--GL-KCTTPVPEQHKVFERQAVSLKKPLVIHCREAEDLLEIMKKFVPPDYKIHRHCFTGSYPVIEP--TAVLTYSSAWEAREALRQIPLE----RIIVETDAPYFLPRKSLCQYAHPGLALHTVREIARVKDQPLS......................................................................................................................................................................... 295
5 -5.460sp|P00519|ABL1_HUMAN Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4  ali   26  1..........................LLEKDYRMERPPEKVYEL---------MRACWQWN--PSDRPSFAEI--HQAFETMFQE..................................................................................................................................................................................................................................................................... 49
6 -5.420sp|O75356|ENTP5_HUMAN(removed signalp:1-20) Ectonucleoside triphosphate diphosphohydrolase 5 OS=Homo sapiens GN=ENTPD5 PE=1 SV=1  ali follow..  15  24....................................SASTLYGIMFDAGSTGTRIHVYTFVQKMPGQLPILEGEVFDSVKPGLSAFVDQPKQGAET-----VQGLLEVAKDSIPRSHWKKTPTAGLRLLPEHKAKALLFEVKE-VSIMDGSDEGILAWVTVNFLTGQLHGHRQETV--GTLDLGGASTQITFL......................................................................................................................................................... 190
7 -5.400sp|P51170|SCNNG_HUMAN Amiloride-sensitive sodium channel subunit gamma OS=Homo sapiens GN=SCNN1G PE=1 SV=4  ali   1MAPGEKIKAKIKKNLPVTGPQAPTIKEL----MRWYCLNTTHGCRRIVVSRGRLRRLL----------IGFTLTAVALI---------QCALLVFSFYTVSVSIKVHFRKLDFPAVTICNINPY.............................................................................................................................................................................................................................. 105
8 -5.380sp|Q15303|ERBB4_HUMAN(removed signalp:1-25) Receptor tyrosine-protein kinase erbB-4 OS=Homo sapiens GN=ERBB4 PE=1 SV=1  ali   23  1....................TREIPDLLEKGERLPQPTIDVYMVMVKCWMIDA-------DSRPKFKELAAEFSRM.............................................................................................................................................................................................................................................................................. 52
9 -5.340sp|Q15878|CAC1E_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo sapiens GN=CACNA1E PE=1 SV=3  ali   19  2................................TVHF-TSTLMAL---------IRTALDIKIAKGGADR--------------QQLDSELQKETLAIWP--LDLLVPMPKA---SDLTVGKIYAAMMIMDY....................................................................................................................................................................................................................... 77
10 -5.330sp|Q8N3X6|LCORL_HUMAN Ligand-dependent nuclear receptor corepressor-like protein OS=Homo sapiens GN=LCORL PE=2 SV=4  ali   11  76................DHEIMEEAIAMVMSGKMSVSKAQGIYGVPHSTLEYK-VKERSGTLKTPPKKKLRLPDTGLYNMTDSGTGSCKNSSK--------PV.................................................................................................................................................................................................................................................... 152

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.