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Query: [S] COG0011 Uncharacterized conserved protein, from VFDB

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPKVTVSIKVVPAVEDGRLHEVIDRAIEKISSWGMKYEVGPSNTTVEGEFEEIMDRVKELARYLEQFAKRFVLQLDIDYKAGGITIEEKVSKYRLast
1 -6.350sp|Q01459|DIAC_HUMAN(removed signalp:1-38) Di-N-acetylchitobiase OS=Homo sapiens GN=CTBS PE=1 SV=1  ali follow..  66...LKGDVSLKDIIDPAFRASWIAQKLNLAKTDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPK............ 147
2 -6.100sp|P41250|SYG_HUMAN(removed signalp:1-26) Glycyl-tRNA synthetase OS=Homo sapiens GN=GARS PE=1 SV=3  ali   12  138.....FKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQ 231
3 -5.790sp|A8MT66|YU005_HUMAN Putative uncharacterized protein ENSP00000383407 OS=Homo sapiens PE=5 SV=1  ali follow..  13  1......................................MNLFCISLEGSMDSLYEPIPEQQANQENMSSRTDSPIP.................. 38
4 -5.750sp|Q7Z2T5|TRM1L_HUMAN TRM1-like protein OS=Homo sapiens GN=TRM1L PE=1 SV=2  ali   201......................LKKFLCYLSQAGFRVSFDPMGVRTDAPLMQFKSILLKYSTP-VQSASEDTVTERVEMSVNDKAEASGCRRW. 283
5 -5.740sp|O94761|RECQ4_HUMAN ATP-dependent DNA helicase Q4 OS=Homo sapiens GN=RECQL4 PE=1 SV=1  ali   13  49.......LLVLPTGAGKSLCYQLPALLYSRRSPCLTLVVSPLLSLMDDQVSGLPPCLKAA.................................. 101
6 -5.600sp|P05198|IF2A_HUMAN Eukaryotic translation initiation factor 2 subunit 1 OS=Homo sapiens GN=EIF2S1 PE=1 SV=3  ali follow..  15  1MPGLSCRFY-FP-----EVEDVVMVNVRSIAEMGAYVSLLEYNN-IEGLLSELSR-IRSINKLIRIGRNECVVVIRVDKEKGYIDLSKR..... 88
7 -5.530sp|Q8N4J0|CI041_HUMAN UPF0586 protein C9orf41 OS=Homo sapiens GN=C9orf41 PE=1 SV=1  ali follow..  13  310.......ATCFFIDTAHNVIDYIDTIWKILKPGGIWINLGPLELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLS............. 392
8 -5.470sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens GN=SMARCA1 PE=1 SV=2  ali   12  3.....FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAV. 90
9 -5.350sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1 SV=2  ali   14  49...........PTSDIESVERKIYKAYKWLRYSYISYSNNKDGSLVTGEADEGRAGTSHKDNPAPSSSKEACLNIAMAQRNQDLPPEG...... 127
10 -5.330sp|O60427|FADS1_HUMAN Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=1  ali follow..  380..NFQIEHHLFPTMPRHNYHKVAPLVQSLCAKHGIEYQSKPLLSAFADIIHSLKESGQLWLDA............................... 440

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.