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Query: [K] COG1522 Transcriptional regulators, from VFDB

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKVELDKIDRKILEVLQSNGRLTNLEVAERVNLSPSPCLRRIRRLEESGVIRQYAALLDPGKIGLGLSAYINVRLEKQGGAPKGKAPSDIFRAAVATWPEVVTCYAMTGEMDYLLKVFVEDMDHFARFIRDQLLAHPAVIDVKSSFALERIKDTTALPVVVLast
1 -8.640sp|P62851|RS25_HUMAN 40S ribosomal protein S25 OS=Homo sapiens GN=RPS25 PE=1 SV=1  ali follow..  21  57...........KLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIK............................................................................................................. 98
2 -8.510sp|O95671|ASML_HUMAN N-acetylserotonin O-methyltransferase-like protein OS=Homo sapiens GN=ASMTL PE=1 SV=3  ali   13  147LSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLE-------KTEQGYSNTETANVYLASDGEYSLHGNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMR----AMHGMTKLTACQVATAF.......... 297
3 -8.350sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4  ali   10  2...........KICDYLFNVSDSSALNLAKNIGLTKARDINALIDMERQGDVYRQGTTPPIWHLTDKKRERMQIKRNTNSVPETAPAAIPETKRN................................................................... 86
4 -8.050sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4  ali   17  142.EFLDMAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINALIDMERQGDVY............................................................................................................. 194
5 -7.340sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4  ali   13  19.PDLKLPDFSYCILERLRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSILLLLNRFHVDRRSKYDILMEKLSVMLSTRTN............................................................. 121
6 -7.270sp|Q96H20|SNF8_HUMAN Vacuolar-sorting protein SNF8 OS=Homo sapiens GN=SNF8 PE=1 SV=1  ali follow..  14  175....ELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLA-----WLDLQAPGEAHYWLPALFTDLYSQEITAEEAREAL...................................................................... 257
7 -7.270sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4  ali   13  169.PDLKLPDFSYCILERLRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSILLLLNRFHVDRRSKYDILMEKLSVMLSTRTN............................................................. 271
8 -7.180sp|Q9H171|ZBP1_HUMAN Z-DNA-binding protein 1 OS=Homo sapiens GN=ZBP1 PE=1 SV=2  ali follow..  14  1MAQAPADHLEQRILQVLTEAGSVKLAQLVKECQAPKRELNQVLYRMKKELKVSL............................................................................................................ 60
9 -7.170sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1 SV=1  ali   16  56..SVAVTPVQAVILLYFQDQASWTLEELSKAVKMPVALLRRRMSVWLQQGVLR---------EEPPGTFSVIEEERPQDRDNMVLIDSDDESDSGMASQADQKE----------------EELLLFWTYIQAMLTNLESLSLDRIYNMLRMF.......... 180
10 -6.280sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4  ali   16  138....DQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQK............................................................................................................ 187
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.