current user: public
If you have questions about the server, please let us know.

Query: [S] COG2833 Uncharacterized protein conserved in bacteria, from VFDB

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .
# Score Template Links and tools%idFirst MTDKPTYEQTLRGNAIRAISACDLDEKVRLARETASRWFARALSVRSPLDPPLPERPGRPEKPELVPPRMLKKRSLNTEHGRIALMHALAHIELNAIDLALDIVARFAVKPIPRSFFDGWMKVADDEARHFTLLRNRLKSLGADYGDMPAHDGLWQSAHQTRNDLEARLAVVPLILEARGLDVTPSLLEKMIETGDHETAAILNIIYNDEKTHVAVGAKWFRFFCARNRIDPAARFRELVRANFRGELKPPFNELARAEAGLTPSFYRSLSPVSILast
1 -18.700sp|Q7LG56|RIR2B_HUMAN Ribonucleoside-diphosphate reductase subunit M2 B OS=Homo sapiens GN=RRM2B PE=1 SV=1  ali follow..  9  58...............................QAQASFWTAEEVDLSKDL-------------------PHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVP---EARCFYGFQILIENVHSEMYSLLIDTYIRDMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRG-PGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGL---IGMNCILMKQYIEFVA 290
2 -18.400sp|P31350|RIR2_HUMAN Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens GN=RRM2 PE=1 SV=1  ali follow..  7  96...............................KAEASFWTAEEVDLSKDI-------------------QHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQIT---EARCFYGFQIAMENIHSEMYSLLIDTYIKD-PCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRG-PGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKL---IGMNCTLMKQYIEFVA 328
3 -12.900sp|Q99807|COQ7_HUMAN Ubiquinone biosynthesis protein COQ7 homolog OS=Homo sapiens GN=COQ7 PE=1 SV=3  ali follow..  11  42..........................................................................DNISRAAVDRIIRVDHAGEYGANRIYAGQMAVLGRT----SVGPVIQKMWDQEKDHLKKFNELMVTFRVRPTVLMPLWNVLGFALGAGTALLGKEGAMACTVEESIAHHYNNQIRTLMEEDYEELLQLIKKFRDEELEHHDIGLD........................................................ 187
4 -9.220sp|P02794|FRIH_HUMAN Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 SV=2  ali follow..  14  14..............................................................................HQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHL-----EKNVNQSLLELHKLATDKNDPHLCDFIETHYLNE................................................................. 141
5 -9.010sp|Q9BXU8|FHL17_HUMAN Ferritin heavy polypeptide-like 17 OS=Homo sapiens GN=FTHL17 PE=2 SV=1  ali follow..  17  14..............................................................................DTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALEFFRYFLRLSDDKMEHAQKLMRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHL-----EKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLHE................................................................. 141
6 -8.650sp|Q8N4E7|FTMT_HUMAN Ferritin, mitochondrial OS=Homo sapiens GN=FTMT PE=1 SV=1  ali follow..  15  73..............................................................................HPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLL-----EKNVNQSLLELHALASDKGDPHLCDFLETYYLNE------------------QVKSIKELGDHVHN---------LVKMGAPDAGLAEYLFDT...... 232
7 -8.110sp|P02792|FRIL_HUMAN Ferritin light chain OS=Homo sapiens GN=FTL PE=1 SV=2  ali follow..  14  10..............................................................................STDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMAL-----EKKLNQALLDLHALGSARTDPHLCDFLETHFLDE................................................................. 137
8 -5.580sp|O75845|SC5D_HUMAN Lathosterol oxidase OS=Homo sapiens GN=SC5DL PE=1 SV=2  ali follow..  10  128...................................................................................................................FFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPYHIYPFIFVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHYNYGQTLWDRIGGSFKNPSSFEGKGPLSYV---KEMTEGKRSSHSGNGCKNEKLFNGEFTK. 297
9 -5.460sp|P10242|MYB_HUMAN Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2  ali   15  1...............................................................................................................................................................................................................EDRIAHKRLGNRW-AEIAKLLPGRTDN------------AIKNHWNSTMRRKVGYLQE.......... 51
10 -5.390sp|P0C7X4|FHL19_HUMAN Putative ferritin heavy polypeptide-like 19 OS=Homo sapiens GN=FTHL19 PE=5 SV=1  ali follow..  14  15...................................................................................................................FDRYFLRQSQEKREHAQELMSLQNLRGGRICLHDIRKPEGQGWESGLKAMECTFH-----LEKNINQSLLELHQLARENGDPQLCDFLNDFLNQQAKTIKELGGYLSNL................................................... 119
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 3 0 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Godzik A. Secondary structure prediction using segment similarity. Protein Eng. 1997 Oct;10(10):1143-53.