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Query: [S] COG5572 Predicted integral membrane protein, from VFDB

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRGHDGYIVSSSPETGGLRGGEILFADHCNLGHPRNELSHDRAAQGRLGANPPGESLMTRTATTAALAAAIALSAGVSIAAADEHKAGAQTEKCYGVSKAGENDCKAGAGTSCAGTSKVDYQGDAWKMVKKGTCVTIKTPKGMGSLTPKALast
1 -8.390sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3  ali   14  85................CQQGGEIILCDTCPRAYHLVCLDPEL---DRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGEDACISSYHIHCLNPPLPDIPNGEWL------CPRCTCPVLKGRVQK.. 211
2 -8.310sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=1 SV=1  ali   15  51..................QGGEIILCDTCPRAYHLVCLDPEL-------EKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGEDACPSSYHLHCLNPPLPEIPNGEWL------CPRCTCPPLKGKVQ... 170
3 -7.680sp|Q6IE81|JADE1_HUMAN Protein Jade-1 OS=Homo sapiens GN=PHF17 PE=1 SV=1  ali   30  208........VCQSPDGED--GNEMVFCDKCNI---------------------------------------------------------CVHQACYGILKVPEGSCALGVQPKCGGAMKPTRSGTKWVHV---SCA............... 283
4 -7.350sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2  ali   16  63....DGYETDHQDYCE--QGGEIILCDTCPRAYHMVCLDPDMEKAPE-GKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGEDTCPSSYHIHCLNPPLPEIPNGEWL------CPR.............. 192
5 -7.320sp|Q9NQC1|JADE2_HUMAN Protein Jade-2 OS=Homo sapiens GN=PHF15 PE=1 SV=2  ali   30  204........VCRSPEG---DGNEMVFCDKCNV---------------------------------------------------------CVHQACYGILKVPTGSCALGVQPKCGGALKPTRSGTKWVHV---SCA............... 279
6 -7.260sp|Q92613|JADE3_HUMAN Protein Jade-3 OS=Homo sapiens GN=PHF16 PE=1 SV=1  ali   28  205........VCRSPDS---EGNDMVFCDKCNV---------------------------------------------------------CVHQACYGILKVPEGSCVLGIYPQCGGALKTTKTGTKWAHV---SCA............... 280
7 -7.000sp|Q8WXA2|PATE1_HUMAN(removed signalp:1-21) Prostate and testis expressed protein 1 OS=Homo sapiens GN=PATE1 PE=2 SV=1  ali follow..  20  1.......................................................SLSMRNDAVNEIVAVKNNFPVIEIVQCRMCHLQFPGEKC----SRGRGICTATTEEACMVGRMFKRDGNPWLTFMG--CLK.............. 75
8 -6.870sp|Q9UK99|FBX3_HUMAN F-box only protein 3 OS=Homo sapiens GN=FBXO3 PE=1 SV=3  ali follow..  7  343VQG-PG-VVGEFP----ISPGRVYYTSCTTFSTTSGYME------GYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLEMGPDEYEEMEEEEEEEEEEDEDDDSADMDESDEDDEEERRRRVFVPIRRRRCSRL............. 470
9 -6.750sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1 SV=2  ali   12  1..GQEGPELCGVDKA--IFSGISQRCSHCTRLGASIPCRSPGCPRL-ATASGSFLSMKTLQLLCPEHSEGAAYLEEARCAVCEGPGELCDLFFC--------TSCGHHYHGACLDTALTARKRAGWQCPECKVCQACRKPGNDSKM.... 138
10 -6.570sp|A1IGU5|ARH37_HUMAN Rho guanine nucleotide exchange factor 37 OS=Homo sapiens GN=ARHGEF37 PE=2 SV=2  ali   14  67......ISGTGTLDLTLPRGQIVAILQNKDTKGNSGRWLVDTGGAGKLQLYHVVPSAEELRRQAGLNKDPRCLTPEPSPALVPSIPTMNQVIAAYPFVARSSHEVSLQAGQPVTILEAQDKKGNPW-YVPSGFLARARSPVLWGWSLPS. 225
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.