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Query: [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGELast
1 -3.130PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)  ali follow..  10  11............................VLEYCPAPGQFTNLKACEEQLEDGNLVCAAGGYITVALDQPIKNGKGSDIR--ILGN----AFYSANDPKYGDATIGGSVEPGIVYVGVGSSPETAEWYELAGSEYYTTEMHRFEITYYKPTVETG-------IKTPYITIDNYIRWTASWTNPDGSKQTAEGWQPKNVYHKQ-----SYWPAWEENDQITFRGARLPDNAVNYGGDGSDPDNPQYWVSYRYAADSYGYADAAPNSDNV--TTFDLDWAVDSD-----NPKHLDHADFIR----IQSGVLQQCGWTG----ETSTEVGRITN................................................................................................................................................................................................................................ 298
2 -2.750PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  97..............................................................MVRYNAFADMGSDLSYSYALLDE--------NNGMIITGIYGRSETVTYAKPVKDGKSNY-SLSVEELQALQRAKENTIDTLELQGFRSKKEL............................................................................................................................................................................................................................................................................................................................................................................................................... 181
3 -2.520PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali follow..  2............................................................................................................DIGPCSIPTGEFLVGDPLVYLGSKYEKEYFQKIPTGEFR---------TEICVVKASDGDCDRYAAVRLKFNDNEISYFEEAM-KGIEDLKDINEGDFFGFNVDAGLACICDKKLHDLYCEFDEKFVKENPDGNAYDDYFADLFKKSYEDNPKYQRDGGDWINWTIPGTDYHLPISGFGDGAYPVYLAYDKDGNVCQLIVELIDIELAYSEIDEED...................................................................................................................................................................................................................................... 209
4 -2.060PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  12  72............................PVLFA----GITHLQSLKHRLLTYFYYRIYRKERYI----------TIQEQDYIRDSFVRAGFSSDLIRY---DAMVYMYELQSAMVKS..................................................................................................................................................................................................................................................................................................................................................................................................................................................... 157
5 -2.040HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  23................................KQVPENIIQPDRMENILYDYHLSIS-----MGNNLSYSDNYQKEAYKNYVFEKHHITEAEFDSSMVWYTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPGDTVDVWYDRKLYWLTDVPLANKVTFEIPADSNFFLWSADYIFLSEGERRATMGFNILFDNDSVVGRVK---VQTLYIKPDSAIKSVNGFIYYMDSDSSTNKPGLIINNITL................................................................................................................................................................................................................................................................................................................ 248
6 -1.970PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  10  3.................................................................IDKGGPEAHFKRYIKEHVKGKK-TGLFITLGADPAGEHGESMLKVGRELLNEGGNFICQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQASTHPDEN---------DLKNARKAFEG.............................................................................................................................................................................................................................................................................................................................................................................. 120
7 -1.840HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  22  3......................................YLHLFHVLLLICNRELL----GK---RKDEDDMAKSTKTYEERIRA---------EKKEQESIEATKKLIAQRKELEKRKKA-----EESKKRTHRLCQIGGAVESVLGCPIEEEDLPKLIGFLKRQETNGKFFSKA........................................................................................................................................................................................................................................................................................................................................................................................... 124
8 -1.790PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]  ali follow..  11  150NLQNLQFLLNFYSHYLEVIEQFTYPKYYIASFLKESYNSSVWGH---------YGQGHSG-VCLIFETNNEGEIPFLNVYTGLK----------KEVNYNGNFEEINFFESLGKIPQPLVESFYIDENKNKSILFDKVLNNQEEWRKLFWDKYEKNKLTKTKDWTYEKE---YRIVLNRLMDYEIKEEDRKLKYDF-----------------------NCLKGVIFGIKTPQNKKDEIIEIIINKCHENNILDFEFYQAFYCKESKNIQHKKLD....................................................................................................................................................................................................................................................................................... 379
9 -1.780PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;  ali follow..  103..........................................................KVWQAIMFEDTQNG--DYDYNDLI------IHVKNTASNHAYQHPTETWQTIEIQPIALGSTKTIKLGCILSDGSTHMISDDVRTDLFGGRQGFINTVNDNDPIRYKLASTNIKNYAMPKKEKTSAAWVAWFIEVDGKRMYSYDMVNKENMP---YGLAVSNGNGTFSYPQEKNSLFETYPGFSDWINGKVSSIGSFQKELVYKYCSGGIIGEDGKSHKIWD-----YLD.......................................................................................................................................................................................................................................................................... 325
10 -1.710PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  255.........................................LISGTPSQVQTFIPTAEDG-SYSRQNEIDWEEIFTAMGLEWKEKLSVIKTHGIHTLQLTDEQKEEIDTVFSDLFERSSVANGREMYSFVARLAVNLCR-----------IMSEVAVLRALESPQPYDFKTSPTSPF---TPDKEIPTDNRKDDIITRWDVSISQEDFHAVLSLAEPLYCHATHILSFLPNTEISHRNADRDYLFQKL---GDEFTRTQLLEEAVAMGIKENTALTWLKRLTKHGK-------LISMDGKGL............................................................................................................................................................................................................................................................ 508

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25.