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Query: [E] COG0040 ATP phosphoribosyltransferase, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGKLLTMAMPKGRIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRFILAKPMDVTTYVEHGVADVGIAGKDVMLEEERDVYEVLDLNISKCHLAVAGLPNTDWSGVAPRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGLADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDDVIDEMASRLSLVVEGETAKLast
1 -2.490PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  3  3......................................................................................................................................................TETLTYLLEHPDKITSEETTQLRTVVEQAARALHLKGLKNEDSFLYNTYLKKTAAHTQDRT.. 68
2 -2.260PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  13  102............................................................................................................................................EGMKMPIRYVCEMFIDRVSASKNYQKEKYTALEYYEKSVDHYMIHPDT----KAMLEYLLVMLSVKGEEYTYS 173
3 -2.220PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)  ali follow..  17  12.........................................................................................................................AVDFCRKRGLEFYAVNSNMPEEEADMSASADMYIDDRNLGGLPDWGVI--YEMVHNRWSYNRYLNEIHDFERSQKVSWWKRL.......... 97
4 -2.150PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)  ali follow..  6  35......................................................................................................................................................GTINKAKLTKYLQLSSQQNEQVASICQMKVANSSKKNSDQKVRNAVYGNLKLMKNTLTEKQYS 102
5 -2.040HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  9  22...............................................................................................................................GKQVPENIIQPDRMENILYDYHLSISMGN--NLSYSDNYQKEAYKNYVFETEAEFDSSMVWYTRHTEELASLYKKLGERFRSEKKH 109
6 -2.040HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;  ali follow..  17  1.................................................................................................................MAVSAPPILKTLKTKDMIAKTILQQIGGKRFTAMTGSRDFI........................................................... 41
7 -1.920PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  1  6.................................................................................................................................................................GGPEAHFKRYIKEHVKGKKTGLFITLGADPAGEHGESMLKVGRELLNEGGNE 57
8 -1.910PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;  ali follow..  7  22.CTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSRED------VERIFGKLSEVDERIQAPYYWI.......................................... 185
9 -1.900HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;  ali follow..  6  4........................................................................EVHYFDELLERIRDIRASEKRVYRKVKEIFALSVDYDSKSQVAQSFFKSVQNEYAATGHTAPELIAKRADASKDNMGLTS---DVTVAKNYMTHEEISTLNLIVNM----YAELQAKGHIPMHMADWESKLGDFLRFNGRE 151
10 -1.890PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  11  76..........................................................................SLKITIDENLFPLLSIKSNNGRLAIRIQDGTRIKPTQYVIEGSSKTLKY------------LKTSGPMDFEAQNAFSEDQLEIKISGS................................................... 151
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 5 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.