Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: [C] COG1151 6Fe-6S prismane cluster-containing protein, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .
# Score Template Links and tools%idFirst MSETISEKSEGRVSYHDSVEEMVKKIREDGMSNVFDRYALQEKIRCKFCLEGLSCQLCSNGPCRISEKTGQEKGVCGIGPDAMAMRNFLLKNIMGAGTYSHHAYEAYRTLKATAEGRTPFKITDENKLKWMCEKLGIDTAQSINDMAFELAVILEDQQRIGVEDQNVMVEAFAPKKRIEAWKKLGIYPAGTVHEEQNCVASCLTNVDGSHISLAMKALRLGIATIYNTQIGLEMVQDILFGTPTPHEVNMDLGIMDPEYVNIVFNGHQPWIGAATILKAKTPEIQDMAKQAGAKGLRVVGSIETGQELLQRFPVDEVFVGHMGNWLAIEPLLATGTVDIFAMEENCSPPAIDMYAEKYQVTLAAVSTIIDLPGVNYKFPYDPAQADETAQRLIELGIENFKKRKERQIKPHVPQKIQKAIAGFSTEAVLGALGNKLDPLVDVIAKGQIKGVVALANCSTLRNGPQDWVTINLTKELIKRDILVVSGGCGNHALEVAGLCTLDAANNIAGNGLKAVCNALKIPPVLSFGTCTDTGRISMLVTALAEHLNVDVPQLPIAVTAPEWMEQKATIDGIFALAYGAYTHLSPTPFMTGARQLVDLLTNKAEDVTGGKIALGDDPMKVANDIEDHIMRKRKELGLSLast
1 -4.600PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;  ali follow..  15  43..................................LFSYAIKRLERCHFGEDKPACKHCPI---------------CYQPARREAIKAIMRWS--GPRMLLRHPILAIRHLIDDHRPVPDYPKRETSAKTSTGRTARLATQRATSA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 137
2 -3.720PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  12  68................................................................................................................................................................................................................................................................................................................................................MDAETPGGRLLRPQAQVMEEAIRHWATVLSVRLDLDAARGKLGPEACEMERQRFDGVIAMMERNDGPTHPWTLDRSSGRPLVPITTFSIAMAYQQNGGRLDPFVEGLEA---------------------------LETLQDGDRVLISEACNHNRITSADIGMVQ-EAALGGKKLQEHAFGREFPEAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFFS................................................................................ 293
3 -3.190HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  20  89............................................QCALEKGVATCGDCLDLER------------CPTVGEILENNPSALKNLKG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 127
4 -2.200PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  9  113.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................QIKLAPVNAPYFDGAKLLIAADCTAYAYASF-IGCPKLDSVDYSEKLTEIIRRNDIQSVMEVPCCGGLEMAAKKALQDSG------KFIPWQVATIS............................................................................. 217
5 -1.860PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  8  9...............................................................................................................................................................................................................................................................SKYVIRIICEGEEPLFFTSLCDKLLDENGGEEEWDVKTIPQPDIPEEKPSMADRGLYKNKKKRVKGKKDKLQPEVQGQPPLSWIAVFDKD--FEEAEKLIDDKKVNIAFSSRSFEYYLLLHFEYLYHPFHATECGERIDGKKVNYNCMTEKSKENACHGEKCINGY--ETKTSQSTFPLIEKRLKAGIINAKLRIESNSKENCPIYDRNPYTNVDKLVCRL................................................................................................................................................................... 259
6 -1.680PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;  ali follow..  9  23..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EDFVSLT---QSVIAVNLGITNIRFLPD-----VANFKRLFKVATQLGLAEKSASRKMLMQDYGISESFFKEINDVQAYLFMYQGFSSDLMMLMGNLMQWKFRM------PAIFKKALRSMTEKTVHDVCTKTVWKADDVHKTA-----AVRQYKERLGFS 183
7 -1.580PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  11  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................MHNFKEKIQFSKIRSR----SCPFMQQNKFRKAIVAILMPMI---LVVSFGNCGKFAIVKK--DGFNIGSGLLAKFIKTLVMYFPFSILYFVGFFFD--------LILFNLIEFWSGNNPVGYNEYDENGKYVKAY.................................................................... 125
8 -1.500PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  15  94.............................................................................................................................................................................................................................................................................................................................................................SIQDYEQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSS------DEEIVIIKNGDKETPVVVQTKKPDIRGVLVVAGVDNVQIKKTIIEAVTRVLDVPSHRVAVA........................................................................................................................................................... 223
9 -1.240PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  6  19.....................................................FFEWCFS-QIPTYKWSNKKETILASNRKNCS---VIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVV-----GKEIIEFDLVNFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKYLEIPHDFKEIETIYKYRVEIEFLQKIKARQLAKEVMYPVTQYTNGSF--KTVDMRTINSKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVG--IVRFQNWIIKNKVDFSYYLDYL------------NLMRDLNIAI----------------DSENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKD-KTIDNYAFIVPKQASDL---LTEGKA-----LSHCVGGS---------NYIKQHIEGKTTIIF------------------VRDKQDLEKSLYTLEYKNGQIYQLGKHNCTKDVQMAANKWAKLLKSKTKV...................................................................................... 449
10 -1.050PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  10  6...............................................................................................................................................................................................................................................................GEPGKGIVLYGKN---IQKIVDWILTIEDREQRTRYANTCVELMRQLNPGVRDTEEHT----------TKLWDHLFIMSNF---LDVDTPYPMPDIAVLGRK--ERVPYNHNKLKYK--------------KNINLLIEQAILKEDGAEKEDAIIYLGRLMKRLYSTWNKENVD---DEVIVEHLSELSKNNLQ.............................................................................................................................................................................................. 171
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.