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Query: [S] COG2833 Uncharacterized protein conserved in bacteria, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTDKPTYEQTLRGNAIRAISACDLDEKVRLARETASRWFARALSVRSPLDPPLPERPGRPEKPELVPPRMLKKRSLNTEHGRIALMHALAHIELNAIDLALDIVARFAVKPIPRSFFDGWMKVADDEARHFTLLRNRLKSLGADYGDMPAHDGLWQSAHQTRNDLEARLAVVPLILEARGLDVTPSLLEKMIETGDHETAAILNIIYNDEKTHVAVGAKWFRFFCARNRIDPAARFRELVRANFRGELKPPFNELARAEAGLTPSFYRSLSPVSILast
1 -3.200PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]  ali follow..  13  1.............................................................................................................................................................................................................LIAPDGSFPPVGRSIAYRCGAFQLLAQMALRRELPEGVAPAQVRTGNDGAGWLRIGLAGHQPGLGEVYI. 89
2 -2.800HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;  ali follow..  10  1......................................................................................................MAVSAPPILKTLKTKDMIAKTILQQIGGKRF----TAMTGSR---IDMGNGLRMSLARNKTSANRLDIIYDEGADLYNMRFYRRTFSKKTFECKTKDIAVHEGIYFDMLEEM............................................................. 107
3 -2.330PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  1.....................................................................................MKTKFIYVVLMALFLGSQMTLSAQNEENKERKQRPTPEQMMQMQTNQM----VRALMLDDATAAKFTPIYEKYLKELREC-MNFKPRARKDAAQGTEANTAKETPKPVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKILSQKQIMKIYQQEKSNMNKFRKEFDRRKGQKP................ 171
4 -2.320PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  10  65...........................................................................................................................................................................................................KAFADNTPVLFAHG---ITHLYDELPHHAVQSLKHRLLTYF----KTTYYRIYRKERYITIQEQDYIRDS.. 128
5 -1.970PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  10  60............................................................................................................................................................................RLIWADELAALLESVQRECEEREAVLVREMAEAEGVNEEMKGNEQMAWVQRMEMICGRVEEVVCEEI.................................... 126
6 -1.920PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  1........................................................................................MTDSLFWAIDIKNQFHHNWMGMSQHRNITDQVLENFTDALDCLT---AHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQQSLLLLCYDHVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRI---GGNNSFPHEIGLFIGYPAKDVAAF..... 187
7 -1.900HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  116.............................................................................................YTQIAKYNTFLENITDCPMEESKK----EQWSAEVKCLRAYFNLAFYYT-----------------------------------DVPMPLKTLSVDEANSISQTPQTEVYSQVEKDGIWRLPGG.......................................................... 216
8 -1.690PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete)  ali follow..  17  1.....................................................................................................................................................................MKRFASHFLFLPAYGY-----LKQYAVETEEGSVVRIFP--LTEEIENVEWGA-----VLLTQDELKELDTNSPLVNAPQNYSKTSAEFYYNSTRILVKFPQNLLMALP. 100
9 -1.640HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  25  10......................................................................................................................................................................................................................................................VLVKKFFSENRIDVGFSRRVMRRL..... 36
10 -1.630PB045813 Q5LF03_BACFN/1-275 PB045813; Pfam-B_45813;  ali follow..  10  141.............................................................................DGQKYPAEIIPIRLSEIYQVNEAYEWVTDTVKTQLKKDFQLQKIQDVIDSGVLSPKKKEPWLAFGIAICTI-LANEVEGMEWMTLVDGNREVPVLRYEGSEQLIDPMKLLWSRVRAGETCEVAEAYKQAL.................................................................... 274

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.