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Query: [H] COG2998 ABC-type tungstate transport system, permease component, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEFTMKKTTFTLAAASLILVSYSASSADDARIRLATTTSTYDSGLLDYLLPKFEQDTGYKVDVIATGTGKALKMGENGDVDLVMTHAPKAEASFVEAGFGVLPRKLMYNDFVVVGPESDPAKIADEKNIAKVFENIAKSGAVFISRGDDSGTHKKELGIWAQNKIEPNFGGYRSIGQGMGPTLNMASEMQAYTLTDRGTWLAYNNKLALKILFEGDEQLFNPYQVIIVNPERYPTTQYHAAKVFSDWLVNPKGQQLINEFKVNGQQLFVANADKQLast
1 -8.230PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  1....MKTGIRVTVYALLAMILFSCEHKEMVTLRVDFDWKNAPQADPEGMC--YPEEGESPIRFDFAGKDGGSVEIKEGRYRILCYNNDTESLLFRGMEGFDTHEGYTRDGNVFESIYGNGAHYAPPAKGSEDERVVICPDMMWGSC--------------RNVEITELGLSYECISFADKDKVEWIESSEHVITLYPAELIC---TYTYEVRNVKNMEYMTQACGSLSSMAPNEELDRECVTVPFETELHLESSKMTGKFYTFG---HHEENARP 265
2 -6.880PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  1....MKRNYFFTMLAAVLLAVAGANAQESAE-----FRPAELAGIWQLCHYVSEIPDV---PGILKPSNTFKVLSDDGRIVNFTMIPGKDAIITGYGTYQQLTDNSYKESIEKNIHLPMLDHKDNILEFEIGDDGVMYLKYFIAKDLNGNELNTWFHETWKRVGMPAKFPEDLV..................................................................................................... 162
3 -6.700HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  18  1....MKTLKITFVMLMTALFLVLPSCSKDDVN----VTLTPSEEVVNAFQQKYPDVKNVKWE..................................................................................................................................................................................................................... 54
4 -6.580HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  12  1....MKKLLLAMIAVAALISFAACDHNETYADQRDR----------LDSINAFLRNENIKVIVLFESNGIYMQVINDGCGDYIAKGKTQN......................................................................................................................................................................................... 108
5 -6.230PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671;  ali follow..  12  1....MKKVLVALTMVMGMGSAVAFAQEPVKDKFTKITVKELPQVVKSTLSKDYEDQSTEEITVLLNEKGEPVNE......................................................................................................................................................................................................... 109
6 -5.450PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  16  1....MKKTIFYSLFSALFMLTSCSMFEIDN----YEEPSETIWGEV------VDEATGKRVLTDQGSEGIRVRLTELS------DNVQHNPDFYCMMDGTFQNTKIFKGEYNVRI................................................................................................................................................................ 97
7 -5.310PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  16  1....MKYVKILFAMALVLTMCSAFSLKKGHSKTVGIAASFTDTVVIQILDSAKVSKEGF........................................................................................................................................................................................................................ 62
8 -5.260PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;  ali follow..  10  1MKTLTFKYLKLFLLAVAMINLTSCEIEIDD----NKSLDLCSRPWADTFYDADGNYCYQELNFYLDRHGE............................................................................................................................................................................................................. 78
9 -4.900PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  1....MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKEREQAVIARLIDIRKAQRSLHHGMYTEHFDTLIDFVKNQKLPFVMKVGQLTDDQLESG.................................................................................................................................................................................. 96
10 -4.820PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  1MKI-ERLFIYCLLAGTSLLASCNSEDMTDNPLTFTAMQGEVVATPQTRVSSKWDGGEVIGVKIGTDGAVGSYTLDSDGKSNIPAYWQSTASQTVYG-------------------PNTADISLTGQDNTGNKFPYLKGVSSKQYSYKENVQLNLEHQLVKFRVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKTYLATRKVG-------------DYYTAMLA-------PDTKTSNNFVKIEVYGLTYYYNPDIELVKGTVYT...... 257

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.