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Query: [K] COG3432 Predicted transcriptional regulator, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTYGYNIFTVIKFSDNVYKLQLIYYSMQLERRKRGTMEIMFDILRNCEPKCGITRVIYGAGINYVVAQKYLDQLVKVGALNIKTENDRKIYEITEKGKLLRTHIEEFIKIRENLYSAKEKVSELLRTDSELast
1 -15.300PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;  ali follow..  14  15......................................VLLYIFDRVQFPLANIQLTQFI-MNYFMLQQFIGELKESSFIMEQEKDTGQLFMITDQGKKTLTYFIS-EEKRLKIDHLLNIKKEEFVRNTE 112
2 -5.330PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  16  9.........................VLQFSDMKSDSPDLKTAMLGRIRA-DEPRKVWTPSDFSRDAVDKTLQRLTKAEALRRIDRG---LYDQPGFNK................................ 81
3 -4.390PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  15  440......................ILSFLPNTEISHRPNADRDYLFQKLGDEFTRTQLLEAMGIKENTALTWLKRLTKHGKLISMDGKG........................................... 507
4 -3.900PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  7  83.....................................RLLHLVASSVDGSRDIETIAHRVSVSADNVRYLIQKLDPLGVTVPEGREEEDISAPRSDLLLALK............................ 154
5 -3.580HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  14  79.....................................................DTLFVFAFFSDNRLNQALAALRKSGA-----GTFPYKAILTPTNQNW-----NALQCFSEIRREHETIQKQLKGNKE 145
6 -3.320PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  11  133..........................................................SRVVTPDDLDNAGNVLFKLNDADKDEEKSLRAALTLHT-IRETDLFEIFSSQVENKNVIDSLMGKYLDGNGN 203
7 -2.860PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;  ali follow..  11  151..........................................................ASGSAFEDIDMAVRTIKKDSPSEAEMRHAGKVMT---DGTELYSRITERLTDEPMSERLAKAMAVFVDTVNT 221
8 -2.840HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  10  31...............................QPDRMENILYDY--HLSISMGNNL---SYSDNYQKEAYKNYVFEKHHITEAEFDSSMVWY--TRHTEELASLYKKLGERFRSEKKHMQELLALRENKPA 122
9 -2.790PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]  ali follow..  12  151..........................................................ASGSSFEDIDMAVHTIWKESPSDEEMRHAGKVMT---DGTELFTRITERLTDEAMSERLAKAMAVFVDTVNM 221
10 -2.670PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  8  2.................................KTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKEREQAVIARLIDIRKAQ----QEYRSLHHG-MYTEHFDTLIDFVKN................. 76
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.