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Query: [S] COG4121 Uncharacterized conserved protein, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFIMSSISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIAETGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFAQKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSKNPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGSLSEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLALast
1 -3.510PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  46.................................................................................IKFTSDLERRRYLILRRKTRKVWPYAKASIKSKSERRKYTKIVQKYIEEQFAAELK---KLTRTEGQILVKLIHRQTGVTTFQLIKNLRSGWRAFWYDTYNPVNNRE---DFLIEDILQRSFQRNILDNQPSVLNID.................................................................... 201
2 -3.020PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  11  13.....................................................................................................................................................................................TPPRKRRKWRFTVWRR------------SWAATSKPPSGNLPKSGETRKQP----KNEFINEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCD........... 92
3 -2.590HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;  ali follow..  16.....................................................................................................................................................MFQATVADFWMAGLELGVIKTNQRDEASPKEVCSGIPQFIIGVKGLAGFLGTSVS--TVNRWKACGLLDDATLQCGKVV.......................................................... 92
4 -2.340PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  31.................................................................................RKQRPTPEQMMQMQTNQMV-RALMLDDATAAKFTPIYEKYLKELRECRMMNFKPRA----------RKDAAQGTEANTAKETPKPVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKILSQKQIMKIYQQEKSNMNKFRK---EFDRRKGQKPGQGHKPGQDRQRQRQHTPHQ.............................. 191
5 -2.240PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  95.................................................................................................................................................................................IQDYEQEYENQL--KDILETIIGVEDVSIVVNVDATSLKIEKNRKTQETSTNETDKQGGKRTVSEMSSDEEKNGDKETPVVVQTKKPDIRGVLVVAQGVDNVQIKKTII 206
6 -2.210HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali follow..  11  1...................................LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRV-YVSGNN-LFCITGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTFGVNIGF........................................................................................................................................................................ 81
7 -2.110PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  10  6...........................................................................................................................................................GGPEAHFKRYIKEHVKGKKTGLFITLGADPAGE-HGESMLKVGRELLNEGGILAEFICQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQASTHP............................... 106
8 -2.060PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  1...................................IKEERCIWFGQHIEKKNLRTDDGLRLEILSPGWEEGPDFKVFASDWIHHKHENQKTYDAVCLHVVMWNDLKGRCVKNFSGKVIPQI-----TLSLYLEAELDEIIETIDVGSYIGNKQVIPGYCNLEMRKQKITQQWIGGFLAKKYEKWIENKPFERVLYEAI----------------------MESLGYKNNKKP------LMLASLVTAETIQSFVPEYTPAQEKKIIAQSLLLGAGL.......... 245
9 -2.030PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)  ali follow..  12  40.......................................................................LKRAAASMGIGAQLLALESHRLSYEYYALSQRRELWTHDVGLFEYDRRGLRYHHLSVSWKHHPPVVTAETTVLNQYLDGHELADPVPPEMDRQFLEAIKEVISTYYLEGFSGAESGKSWMNLSLKQLCAMKRHVFAGQNLYARGACYHSFDQGS............................................................. 200
10 -1.930PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;  ali follow..  12  1...................................METSSIELWHGSSHVIKHPEYGMGK----NNDYGRG--FYCTRSIELAKEWACAGLDDGFANRYTLTTDGLTFLDLSQP............................................................................................................................................................................ 74

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Godzik A. Surface map comparison: studying function diversity of homologous proteins. J Mol Biol. 2001 Jun 8;309(3):793-806.