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Query: [S] COG5501 Predicted secreted protein, from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKLILALIPVTLTASLALAEPEKPNNPLADGTTWRDLKGDVVGEAAILDGSALFSVTAPYRANDAATVPVTIEQTDAAADPIESLKLVIDENPAPVAAEIRFGPAMAPLKFETRVRVNQYSNIRAIAETPRGIFMHGRFVKASGGCSAPATKDPVAALKDMGEMRLKLFGGKGEVQKARREAQIMIRHPNYSGLQRDQITQLFVSAKFITELVVKQGDELLFALDGGISISENPVFRFSYTDNGAPDFTVHAVDTDGNVFDRVLPKTPPALast
1 -5.030PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  10  1MKIERLFIYCLLAGTSLLASCNSEDMTDNPVETLSEGMYPL----TFTAMQGEVVATPQTRVSDYDDTDGKHKSKWDGGE---VIGVKIGTDGAVGSYTLDSDGKPTTSTSNIPAYWQSTASQTVYGQDNTGNKFPYVLKGVSSKQYSYKENVQLNLEHQLVKFRVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKTLAPDTKTSNVKIEVYGLT-YYYNPDIELVKGTVYTYTVNKVDIP........................ 266
2 -4.370PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;  ali follow..  16  52..........................................................................................................................................................................PNKVTKGQTVEIRCELK-----------KTGDFANTLYTIRYFQFEGEGTLKMDNGITFLPNDRYFRLYYTAQGDENFIVVVEDNFGNSYELEFDFNNR. 147
3 -3.450PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;  ali follow..  10  20LAARLFPAMFALLMLVIAGTGSAAAQP--SPWTARPFGDRLVGWDTYRRLDLLPYLSADTQSLQGEVDSIWLTRDGGNLRAIGNIRVELDGQTVLDTPVQSLNAGESPGGDYIKVPMPYRRSMRISVESHLEYYHVDYRQFPTAEGVSTFSPADPAVDVLDRFRAAGTVDPKPAAPGEVHSNRVIELPGGAEQTIAESTGPASISALRLYRLRIEFDGRTTVDSPLGAGLGPTPVRSLMFAAFPQPDGSMALWCWWPMPFARSARVSLAN 358
4 -3.240PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;  ali follow..  10  1MKVKTSILLLLMIATALPSFGGNGNGNGTDSLQ-YVTRATMYGVGYTNVFDTYLS---P-QEYKGIEFRISRETMRMTTLGDGNVSVQNFFQ---ANLAYTHNRVDNNNTFAGLVNWNYGLHYQ---------FRITDNFKLLAGGMGD-TNNPASARAYINLDASGMAIWHTKIKNYPLALRYQVNLPV-IGV............................................................................ 189
5 -3.150HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;  ali follow..  7  51.RRRIVAGTVLLLIIALIVFCVYSLGRGIGAVNSMIHHDEVYAISRDATPAPKKVSNVKDCSASDVTLQLSAASQSVPVGGSLDFTATIVHE----------------GSGNYLVDGSDSGRVLTITSGQETIYKSDRLLLMAKG............................................................................................................................. 184
6 -3.040PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;  ali follow..  8  7MIKYIATLLLTVLFVACNNGKGQQPSEENEDPKAKEILQGIWLDDE--TETPLMRIIGDTI--DAQSAPVYFKIL-------DTLYTYGKDVTHYQIDKQSESEDPNDTLAFSFKSVEIIPTYTEVTKKDSVVMFDGVRYRAYVYINPSQMKVVKTTYSEDGISMDNIYYDNVMHICVYEGKKSLYAKDITKQMFVDVIPTDFLQQAILSDMNFIGIDRKGYHYQALVCIESPVCNLVNLTISFDGKLNITAAK................ 271
7 -2.980HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;  ali follow..  4  1MRKLVLILLCLIAYPIISIVSSCSEEEDCSMNARPMMQCYLYKIDGETERVVNDTLDSLTITAFGTDSIIGLSLPLRYTADSTVLVFHYSKDVKIKKDTIVIRQKNTPYFLSMDCGYQMKQSITGRSYSRDSIYIQTAEVS................................................................................................................................. 153
8 -2.770PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  8  1MKRNYFFTMLAAVLLAVAGANAQESAEFRPAEIWQLCHYVSEIPDVPGILKPSNTFKV--LSDDGRIVNFTMIPGKDAIITGYGTYQQLTDNSYKESIEKNIHPMLDHKDNILEFEIGDDGVMYL................................................................................................................................................. 127
9 -2.750PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  17  111....................................................................PVQIKLAPVNAPYFDGAKLLIAADCTAYAASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGK........................................................................................................... 207
10 -2.740PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  13  1MKKTIFYSLFSALFMLTSCSMFEIDNYEEPSETIWGEVVDEATGKRVDQGSEGIRVRLTELSGDNVQHNPDFYCMMDGTFQNTKINVRIDGPFIPLVRENTDGTLLHDGSVNTEISGTTKVKFEVQVEFVGNPQVSNGVIKAQ............................................................................................................................... 155
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.