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current user: public |
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Query: [I] KOG1176 Acyl-CoA synthetase, from VFDB |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . | |||||||
# | Score | Template | Links and tools | %id | First | MANSQRSSSLIDPRNGFCTSNSTFYSKRKPLALPSKESLDITTFISSQTYRGKTAFIDAATDHRISFSDLWMAVDRVADCLLHDVGIRRGDVVLVLSPNTISIPIVCLSVMSLGAVLTTANPLNTASEILRQIADSNPKLAFTTPELAPKIASSGISIVLERVEDTLRVPRGLKVVGNLTEMMKKEPSGQAVRNQVHKDDTAMLLYSSGTTGRSKGVNSSHGNLIAHVARYIAEPFEQPQQTFICTVPLFHTFGLLNFVLATLALGTTVVILPRFDLGEMMAAVEKYRATTLILVPPVLVTMINKADQIMKKYDVSFLRTVRCGGAPLSKEVTQGFMKKYPTVDVYQGYALTESNGAGASIESVEESRRYGAVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEEEIITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP | Last |
1 | -3.370 | PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991; | ali follow.. | 15 | 19 | ........................................................................................................................................................................................................................................................................................................PFLLFYCNF----LKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALG-TNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGEL---TPAMAAAIAASPARKFNRSGVEVIGVTPEPLPHLIEALVNRVKFFYQEGGDK....................... | 174 |
2 | -3.010 | PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346; | ali follow.. | 10 | 2 | ...............................................................................................................................................................................................................................................TDSLFWAIDIFHHNWMGMSQINQTTSGNQVLENFTDALDCLTAHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQQSLLLLCYDHVRLEHHLSHPGIRTLLHKAGDCEGMLLELRSRIGGNNS-----PHEIG-LFIGYP--VAAFMGLVRLPFTCQRWKIYGNPA--RSLALAEQYRCCRNKMGARGTSKTLDRSDHPFFCQTDENDYQYLP | 258 |
3 | -2.740 | HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; | ali follow.. | 15 | 42 | ...........................................................................................................................................................................................................................................................................................................................................................GYGLSYTTTQEIQGQPEISVNIDSETGAPQAYATFNVKVTNTGK-----------VPGKTSVQIYGQAPYTEGGLE-----------------------KVAIQLLNFELAPGASEIVSVK........... | 133 |
4 | -2.610 | PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492] | ali follow.. | 12 | 23 | ................................................................................................................................................................................................................................................................................................................................................................................EIDNYEEPSETIWGEVVDEATGKRVLTDQG-RVRLTELSWGDNVQHNPDFYCMMDGTFQNTKI-----KGEYNVR------IDGPFIPLVRENTDNTEISGTTKVKFEVQP | 135 |
5 | -2.280 | PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119; | ali follow.. | 14 | 195 | .................................................................................................................................................................................................................................................................................NFFSSIFLSFISIFALTITFAYNSTFLNLAQNPNEIF-NFDLNNL--IENG---LTVEAIWFLQSKME---------LTDTATVIIINNTAYVNINKNS------------------------------VKHNNFAVNYLKSEE-----NNWYLTGDVEVFSPK-YFVVNNSTKNIFSSVG-------ISSLSTNNPKL....... | 370 |
6 | -1.950 | HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; | ali follow.. | 14 | 1 | .......................................................................................................................................................................................................................................................................................................................................LQTNYKRQRMNIFDIAKQNQ----EKAWQVIKNTNIIQIWEDAGAVGSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAE-EWHAWYQNEENELW----DMIHIREGSRY-MTDEIRETIKIIGVEYYQAVIRDGVRDYSGFKE..... | 188 |
7 | -1.840 | PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371 | ali follow.. | 11 | 15 | ................................................................................................................................................................................................KPKSGITNPSFLPNASGENNE---IVMDSTKFKGKIGRELVDIYSSYISGLPQPEPRYDLRYIKPRKFNSILKHAKNIVLRRNFNSESLDKIQSDSSLFYFVRRNQYAKIKRNRNSILKFFDDELKKRVDT-FRKVENNLMDKIFTDHNKIKIPYGYDLAKSINEENSN--LRQLDLEYDKNIFLYYEDYSNSELKNFYDVFNSSDINIKPIRAYISKKYLRDSEKAIESRGWKLSDISAGGPFLSKIIYDSKLKRVYYLEGYVYAPGEISSILMT........... | 357 |
8 | -1.800 | PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671; | ali follow.. | 15 | 47 | .....................................................................................................................................................................................................................................................................................................................................KELPQVVKSTLSKDYEGTIVKEAFVAEKENGKVYKIIVTAIKEDQS-------TEEITVLLNEKGEPVNEKD.................................................................................. | 111 |
9 | -1.780 | PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934; | ali follow.. | 11 | 55 | ..............................................................................................................................................................................................................................................................................SLGRNARLLMVIPMDAETPGGRLLRPQAQVAIRHWATVLSVRLDLDAARGKLGPEACEMERQRFDGVIAMMERNDGPTLVVTD-SQAIDVVHPWTLDRSSGRPLVPITTFSIAMAYQQNGGRL------DPFVEGLEALET-LQDGDRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIFPELESGGMDGLKLAIHCG... | 262 |
10 | -1.730 | HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861; | ali follow.. | 14 | 1 | ...........................................................................................................................................................................................................................................................................................MKTLKITFVMLMTALFLVLPSCSKDDVNV------------TLTPSEEVVNAFQQKYPDVKNVK---WEILVGAYEAEFIYSGTYSENGQHIVLDKVEAQAYITQGGKDVTKDYQDSSSLVVPRAVRETIAAKGKKVDD---FDEPDS-LINFDGTLY...................................... | 163 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |