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Query: [R] KOG4095 Uncharacterized conserved protein (tumor-specific protein BCL7 in humans), from VFDB

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLRIFKWVPVTDSKEKEKSKSNSSAAREPNGFPSDASANSSLLLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQSESLSPAHTSDFRTDDSQPPTLGQEILEEPSLPSSEVADEPPTLTKEEPVPLETQVVEEEEDSGAPPLKRFCVDQPTVPQTASESLast
1 -5.310PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  27  1MLRRSVRTPPRKRRK-----------RFTVWRRSWAATSKPP................................................................................................................................................................ 37
2 -4.420HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  25  13...KKFFSENRIDVPDD-RRVMRRLDRTRRISRLWTAV.................................................................................................................................................................... 50
3 -3.660HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  26  16ICNRELLLIGKRKDEDDMAKSTKTYERIRALEKK........................................................................................................................................................................ 50
4 -3.480HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  19  2.........TPYKVSHQLKKLNNSSSLT----KKNMTMEENTVH.............................................................................................................................................................. 32
5 -3.090PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  17  1MATQAIDATIFASSHPDIAKRTSISGLL.............................................................................................................................................................................. 28
6 -3.000HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;  ali follow..  27  19MRGQSVTVENGKTVTDGFEKVSNNVNDFISSDK......................................................................................................................................................................... 52
7 -2.990PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  12  93.......SENRKKLEKEATKILSKYKRNRNTTVTRIDTDK.................................................................................................................................................................. 125
8 -2.960PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  10  47YLGTNLTIRRLRKIM--ANSIGGYTTYVNIFYHNWVVILLIATALEVYTLHRIDYLIEKE.............................................................................................................................................. 130
9 -2.960PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  21  101.MQRVLNKSKKTKAQAEMQKLHEALKKEKKSQSK........................................................................................................................................................................ 138
10 -2.920HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679;  ali follow..  15  147.FGRKRKTAAKRIQNEDTDTGILKGNK............................................................................................................................................................................... 172
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.