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Query: [E] COG0006 Xaa-Pro aminopeptidase, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNQNPIKRLQDSLVERALDAFLIEKDEDISYFLQDQARSGVLLITRDEAVLFVSPLDKDLYARIQDVVLVSYSKSVDQELGSYIENTGLKTIGFDSEYTPYGIAQKRMNSGYAFSPQSLVAEKLRCVKSTEEIQKMTRAAEIGSAGYDFVLAALRPGITEKELVRMLHVFWANLGIEKVSFPPIIAFGENAAFPHAIPTNRSLKKGDVVLIDIGVCYEGYCSDMTRTVAFGATPEQQLLDGYVAVAEAQRAAIEFCRAGVPCRDVHKEAVRILRAHGMEKAFIHGLGHGVGREVHEYPRLSPFSDATLQLNMAVTVEPGVYFPGVGGIRIEDTIMIGVNENLNLTNRKVSSEIIIILast
1 -7.810sp|Q9UKN5|PRDM4_HUMAN PR domain zinc finger protein 4 OS=Homo sapiens GN=PRDM4 PE=1 SV=3  ali   18  18.............................................................................................................................................................LTSSSVSNALPVSGSHLGAASPTHSAIPAPGLPVAIPNLGPSLSSLPSALSLMLPMGIGDRGVMCGLERNYTLPPPPYPHLESSY----------FRTILPGILSYLADRPPPQYIHPNSI------NVDGNTALSITNNP----SALDPYQSNGNVGLEPGI.................................... 162
2 -4.370sp|Q9HAZ2|PRD16_HUMAN PR domain zinc finger protein 16 OS=Homo sapiens GN=PRDM16 PE=1 SV=3  ali   19  12.................................................................................................................................................................................................................................................................................ASLGFNEYFPSR--HPGSLPFSTAPPTFPALTPGF---------PGIFPPSL............................... 53
3 -4.190sp|Q5TEA3|CT194_HUMAN Uncharacterized protein C20orf194 OS=Homo sapiens GN=C20orf194 PE=2 SV=1  ali   17  1.........................................................................................................................................................................................LFGNHSTRENLNAGNFNFPSEGHLVRSTGP--------CSRTYFFGAEQIRLLSQIYAAVIEAVLAGIACYAKTSSLTKAKEVAEQTLGSG-FHIHAVNNQGR-ACMAVYDIPDLLGGNGCL---GSVVFSE--SFLTSQILVKEKDGTVTTETSSVVLTA.......... 215
4 -4.140sp|Q49AR2|CE022_HUMAN UPF0489 protein C5orf22 OS=Homo sapiens GN=C5orf22 PE=1 SV=2  ali   13  42...............................................................................................................................TRIHQLEDLEATFADLCDGDDEETVQRWASNPGMESLVPLVQSLKKR-MEVPDYEMVHQAGDYSELPHHISTEQEIEC-QSVHYLLKNLPNPTLVTIARSSLDDYCPSDQVDTIQEKVLNMLRALYGNLD................................................................................................... 174
5 -3.860sp|Q96KD3|F71F1_HUMAN Protein FAM71F1 OS=Homo sapiens GN=FAM71F1 PE=2 SV=1  ali   18  35............................................................................................................................................................................................................................................EFRGLLPVDGEPNPGAGLGVEEGLLCRVVHSPEFNLFLDS-FESNFIQVKRGRNWRDVYKASNT-------MALGVTSSV-PCLPLP--------NILLMAS.................. 121
6 -3.840sp|Q9HAT0|ROP1A_HUMAN Ropporin-1A OS=Homo sapiens GN=ROPN1 PE=1 SV=2  ali   7  2..............................................................................................................................VRERSERVALCNRAELTPELLKILHSQV--AGRLIIRAEELAQMWKVVNLPTDLFNSVMNVGR----------TEEIEWLKFLALACSALGVTITKTLKIVCVLSCDHNGGSPRIPFSTFQFLYTYIAKVDGEISASHVSRMLNYM.................................................................................... 137
7 -3.810sp|Q8IXT2|DMRTD_HUMAN Doublesex- and mab-3-related transcription factor C2 OS=Homo sapiens GN=DMRTC2 PE=2 SV=2  ali   17  45..............................................................................................................................................................................................................................................................................................GHWLPPGFSMPPPVVCR---------LLYQEPAVSLPPFPGFDPGTSLQLPTHGP............... 90
8 -3.710sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1  ali   21  18....................................................................................................................................................................................................................................................................................GYIRSFVHAVHHRMTLNDEEQKLLSNKCVSAIIQGLISFLEP...................................... 68
9 -3.680sp|Q9UK96|FBX10_HUMAN F-box only protein 10 OS=Homo sapiens GN=FBXO10 PE=2 SV=3  ali   26  4.................................................................................................................................................................................................................................................................................................................AMASLYDRIVLFPGVYEEQ-GEIILKVPVEIVGQG................ 37
10 -3.630sp|Q9Y4D8|K0614_HUMAN Probable E3 ubiquitin-protein ligase C12orf51 OS=Homo sapiens GN=C12orf51 PE=1 SV=5  ali   12  3..................................................................................................................................................................................................................................SIFIHKREDQSSHEVLQPLLSSSEGRPFRLGTGANMEKVVKMDRD-MTKGGCCE-----------VITEEAAAALRKATKWAQSGLIVSIGPPV.................................... 84
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.