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Query: [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGELast
1 -6.320sp|Q5D0E6|DALD3_HUMAN DALR anticodon-binding domain-containing protein 3 OS=Homo sapiens GN=DALRD3 PE=2 SV=2  ali   10  111....................PASLGQRVLLHCPASSPCALRLSQLRTVLVADHLAR------ALRAHGVCVRLVPAVRDPHMLTFLQQLRVD.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 178
2 -6.140sp|Q08AI8|CB054_HUMAN Uncharacterized protein C2orf54 OS=Homo sapiens GN=C2orf54 PE=1 SV=2  ali   13  11............................VEGFASQPEAALRI-HATHLGRSPPPRIGSGLKALLQLPASDPTYWATAYFDVLLDKFQVFNIQDKDRISAMQSIFQKTRTLGGE......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 94
3 -5.650sp|Q96NL8|CH037_HUMAN Uncharacterized protein C8orf37 OS=Homo sapiens GN=C8orf37 PE=2 SV=1  ali   16  2..........................................................GGSSIPCGIGTNISWRA-DFLVVSYDDYMW---DKSCDYLFFRNNMPEFHKLKAKLIKKTRAYACQCSWRTIEEVTDLQTDHQLRWVCGKH..................................................................................................................................................................................................................................................................................................................................................................................................................... 99
4 -5.050sp|O75746|CMC1_HUMAN Calcium-binding mitochondrial carrier protein Aralar1 OS=Homo sapiens GN=SLC25A12 PE=1 SV=2  ali   16  4................................PANPD---HIGGYRLATATFAGIENKFGLYLPKFKSPSVAVVQPKAAVAATQ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 52
5 -4.970sp|Q4G0P3|HYDIN_HUMAN Hydrocephalus-inducing protein homolog OS=Homo sapiens GN=HYDIN PE=1 SV=3  ali   20  1...............................LPPKPQGPFSIRAGYSIIIPFKNVFYHMVTFSIIVDNPAFTIRAGESVRPKKINNITVSFEGNPS.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 65
6 -4.810sp|Q14667|K0100_HUMAN UPF0378 protein KIAA0100 OS=Homo sapiens GN=KIAA0100 PE=1 SV=3  ali   14  45........................NCQMVLR-GAETEGCVIVSAAKAQLLQCQHHPAWYGDTLKQKTSWTCLLDGMQYFATTDGRQLWLEVK--------EEHRQRSLDSVQELMESGQA.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 140
7 -4.690sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=ODZ2 PE=1 SV=3  ali   9  7...................................................................................................................................................................................................................IGFHGGLYDPLTKLVH-FTQRDYDVLAGRW--------------------TSPDYTMWKNVGKEPAPFNLYMFKSNNP----LSSELDLKNYVTDVKSWLVMFGFQLSNIIPGFPR................................................................................................................................................................................................................................... 97
8 -4.560sp|Q53FE4|CD017_HUMAN Uncharacterized protein C4orf17 OS=Homo sapiens GN=C4orf17 PE=2 SV=3  ali   20  1..........................CFLVRHTPHPRRVCHI-------------KGLNNIPICTVNDD..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 30
9 -4.540sp|Q96M53|SPATL_HUMAN Protein SPATIAL OS=Homo sapiens GN=SPATIAL PE=2 SV=3  ali   20  1........................HHSFFSRHHPHPQHVTHI-------------QDLTGKPVCVVRDFPAPLPESTVFSGCQMGI.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 49
10 -4.510sp|P86479|PR20C_HUMAN Proline-rich protein 20C OS=Homo sapiens GN=PRR20C PE=4 SV=1  ali   7  2.AFSLSETGPPPGTVQEGPGPDVAQPELGFQEPPAAPGPQAVWQPVLTLYPCIGFRALGDSAVLQVIQT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 70
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 5 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.