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Query: [J] COG0013 Alanyl-tRNA synthetase, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKTMTSAEVRQMFLDFFKSKGHTVEPSQSLVPVNDPTLLWINSGVATLKKYFDGSVVPENPRLTNAQKAIRTNDIENVGKTARHHTMFEMLGNFSIGDYFRKEAIAFAWELLTSSEWFEFPAEKLYITYYPADKDTYNRWVEVGVDPTHLVPIEDNFWEIGAGPSGPDTEIFFDRGEVYDPEHVGLKLLAEDIENDRYIEIWNIVLSQFNADPSIPRSEYPELPQKNIDTGMGLERMVCIIQGGKTNFDTDLFLPIIREIEKLSGKTYSPDSENMSFKVIADHIRSLSFAIGDGALPGNEGRGYVLRRLLRRAVMHGKKLGIQGKFLASLVPTVGKIMQSYYPEVLEKEDFIMQIIDREEETFNRTIDAGQKLIDELLLNLKSEGKDRLEGADIFRLYDTYGFPVELTEELAEDEGFKIDHEGFKVAMKAQQERARAAVVKGGSMGAQNETLSSIEVESEFLYEDKTTQGKLLVSIQDDEIVDEVSGKAQLVFDVTPFYAEMGGQVADHGVIKDAEGQVVANVLDVQHAPHGQNLHSVETLSPLKVGESYTLEIDKERRAAVVKNHTATHLLHAALHNIVGNHALQAGSLNEVEFLRFDFTHFAQVTKEELAEIERQVNEVIWQSLKVETVETDIATAKEMGAMALFGEKYGKNVRVVKIGDYSIELCGGTHTQTTSEIGLFKIVKEEGIGSGVRRIIAVTGQKAYEAFKDAENTLNEVATMVKAPQTSQVLAKVTSLQDELKTAQKENDALAGKLAASQSDEIFKNVQTAGSLNFIASEVTVPDANGLRNLADIWKQKELSDVLVLVAKIGEKVSLLVASKSSDVKAGNLVKELAPFVDGRGGGKPDMAMAGGSKAAGIPELLAAVAEKLALast
1 -5.970sp|O60241|BAI2_HUMAN Brain-specific angiogenesis inhibitor 2 OS=Homo sapiens GN=BAI2 PE=2 SV=2  ali   16  15........................................................................................VLYGAFSLQDLFPTIASGCSW------------------TLENPDPTKYSLYLRFNRQEQVCAHFADHY--LVNFTCLRPSP.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 82
2 -5.550sp|O60242|BAI3_HUMAN Brain-specific angiogenesis inhibitor 3 OS=Homo sapiens GN=BAI3 PE=1 SV=2  ali   14  9.........................................................................................IYGSYSVSEMFPKNFTNCTW------------------TLENPDPTKYSIYLKFSKKDL---------------SCSNFSLLAYQF-----DHFSHEKIKDLLRKNHSIMQLCNFVFLQYDKN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 97
3 -5.120tr|E7EX13|E7EX13_HUMAN Uncharacterized protein OS=Homo sapiens GN=ALPK1 PE=4 SV=1  ali   9  17..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LLPSELRTLIQEAKEMKWPFVPEK-----WQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFDVSGKLLQVAKGLHKLQPATPIAPQ------VVIRQARISVNSGSHPA............................................................................................................................................................................. 138
4 -5.110sp|Q9H5I5|PIEZ2_HUMAN Piezo-type mechanosensitive ion channel component 2 OS=Homo sapiens GN=PIEZO2 PE=2 SV=2  ali   14  8.....................................................................................................................................................................................................................................................................................................................................FTWVLFLATVDSFTTWLNSISREHIDISTVLRIERCMLTREIKKGNVPTRESIHMY........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 63
5 -5.100sp|Q8TAL6|FIBIN_HUMAN Fin bud initiation factor homolog OS=Homo sapiens GN=FIBIN PE=2 SV=1  ali   19  17.....................HYFVPDGDYEENDDPELLFRVSDHRRCSQGEGSQVGSLLSLTLREEFTVLGRQVEDAGRVLEKSISYDLDGEESYGKYLRRES................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 105
6 -4.900tr|E9PND1|E9PND1_HUMAN Uncharacterized protein OS=Homo sapiens GN=BAI2 PE=4 SV=1  ali   11  5...................RQHGSAHAYAKFSAHDWHLHAQGHAICNAHGKGKGHRMTPACPLLSLRLATAFDPAPSACSALASGVLY---GAFSLQDLFPTIASGCSW------------------TLENPDPTKYSLYLRFNRQEQVCAHFADHY--LVNFTCLRPSP.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 148
7 -4.860sp|Q9H665|IGFR1_HUMAN IGF-like family receptor 1 OS=Homo sapiens GN=IGFLR1 PE=1 SV=1  ali   7  8...........................................................................................................................................................EYWNPDNKCCSSCLQ-------RFGPPPCPDYEFRENCG--------------LNDHGDFVTPPFRKCSSGQCNPD................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 62
8 -4.810tr|F5H7J5|F5H7J5_HUMAN Uncharacterized protein OS=Homo sapiens GN=RPTOR PE=4 SV=1  ali   11  2..........KNCIQLAACEATELLPMIPDLPAD----LFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPGRLNDRR-----TPLGE-----------LNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNF-LLAERIMRSYN---------CTPVSS-----------------PRLPPTYMHAMWQAWDLA----------------------VDI---LSQLPTIIEEGTAFRHSPFFAEQLTAFQ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181
9 -4.690sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1  ali   11  2..........KNCIQLAACEATELLPMIPDLPAD----LFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPGRLNDRR-----TPLGE-----------LNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLL-AERIMRSYN---------CTPVSS-----------------PRLPPTYMHAMWQAWDLA----------------------VDI---LSQLPTIIEEGTAFRHSPFF........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 173
10 -4.620tr|E9PG74|E9PG74_HUMAN Uncharacterized protein OS=Homo sapiens GN=TPCN2 PE=4 SV=2  ali   15  2..........................................................................................................................................................................................................................................................................................................SQFRGYLMKSLQTSLFR--RRLGTRAAF--EVLSSMVGEGGAFPQAVGVKPQNLLQVLQK--------VQLDSSHKQAMMEKVRSYGSVLLSAEEFQKLFNEL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 92
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.