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Query: [C] COG0281 Malic enzyme, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTEQLRQAALDFHEFPIPGKIEVTPTKSLATQRDLALAYSPGVAEPCLEIEKDPAASYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGINVFDIEVNEHDPDKLVDIIASLEPTFGGVNLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISAAAIINSLRIVGKKIEDVRLVASGAGAASIACLNLLLSLGMKRENITVCDSKGVVYKGRDDKMDQTKKEYAIEDNGWRKLADAIPNADIFLGCSAAGALTQDMVKSMAAHPIILALANPNPEITPPEAKAVRPDAIVCTGRSDYPNQVNNVLCFPFIFRGALDVGATTINEEMKRAAVYAIADLALEEQNEVVTSAYGGEGATFGADYVIPRPFDPRLIVRIAPAVAKAAMESGVATRPIQNWDAYVEKLTQFVYKTSLFMRPILast
1 -4.870tr|E9PKE1|E9PKE1_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   17  11...............................................................................................................................EFWDIVAITAADEKQELAYNQQLSEKLKYHVFVDP--GNGGSTLCALQCLEKLYGDKWNSFTILLIHSGH............................................................................................................................................................................................................................................. 92
2 -4.870tr|A6NMH3|A6NMH3_HUMAN Uncharacterized protein OS=Homo sapiens GN=TNNI3K PE=4 SV=1  ali   15  1.....................................................................................................................ELRGKLVARGEFWDIVAITAADEKQELAYNQQLSEKLKYHVFVDPAGGNGGSTLCALQCLEKLYGDKWNSFTILLIHSVS............................................................................................................................................................................................................................................. 92
3 -4.800sp|O14772|FPGT_HUMAN Fucose-1-phosphate guanylyltransferase OS=Homo sapiens GN=FPGT PE=1 SV=2  ali   16  11...............................................................................................................................EFWDIVAITAADEKQELAYNQQLSEKLKYHVFVDP--GNGGSTLCALQCLEKLYGDKWNSFTILLI................................................................................................................................................................................................................................................. 88
4 -4.800tr|E9PNQ2|E9PNQ2_HUMAN Uncharacterized protein OS=Homo sapiens GN=TNNI3K PE=4 SV=1  ali   16  11...............................................................................................................................EFWDIVAITAADEKQELAYNQQLSEKLKYHVFVDP--GNGGSTLCALQCLEKLYGDKWNSFTILLI................................................................................................................................................................................................................................................. 88
5 -4.430sp|Q8N0W3|FUK_HUMAN L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2  ali   8  9.................................................................................................................................WTVIILTCQYKDSVQVFQRELEVRQKREQIPAGTLGSGGATLNALLVAAEHLSARLHSAWILILHMG.............................................................................................................................................................................................................................................. 96
6 -4.100tr|F5H0X0|F5H0X0_HUMAN Uncharacterized protein OS=Homo sapiens GN=CACNA1C PE=4 SV=1  ali   21  1.........................................................................................................................................................................................................................................................................................MLRAFVQPTPAYQPLPSHLSANTEVKFKGTLVHEAQLNYFYISPG---GSNYGSPRPAHANMNANAAAGLAP--------------------------IPTP--AALSWQAAIDAARQAKLMGSA............................ 98
7 -4.030sp|Q8TAL6|FIBIN_HUMAN Fin bud initiation factor homolog OS=Homo sapiens GN=FIBIN PE=2 SV=1  ali   9  24.......................................................................................................................................DYEENDDPEKCQLLFRVSDHRRCSQGEGSQVGSLLSLTLREEFTVLGRQVEDAGRVLEGISKS............................................................................................................................................................................................................................................ 86
8 -3.960sp|O75161|NPHP4_HUMAN Nephrocystin-4 OS=Homo sapiens GN=NPHP4 PE=1 SV=2  ali   14  20.................................................................................................................................................ARYLAVQTLQIDVWDGDS-GSAAVQMKHLLRQGRPAVQASHELEVVATEYEQDNMVVSGDMLGFGRVKPIGVHSVVKGRLH................................................................................................................................................................................................................ 103
9 -3.870sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens GN=LRP2 PE=1 SV=3  ali   29  34...........................................................................................................................................................................................................................................................................AMSEDFVMEMGKQPIIF--ENPMYSARDSAVKVVQPIQVTVSENVDNKN...................................................................................................................... 80
10 -3.810sp|Q6UXB0|F131A_HUMAN Protein FAM131A OS=Homo sapiens GN=FAM131A PE=2 SV=1  ali   10  3.........................................................................................................................................................SSLCSLEDGLLGSPARLASQLLGDELLLAKLPPSRESAFRSLGPLE........................................................................................................................................................................................................................................... 48
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 3 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;