Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: [K] COG1709 Predicted transcriptional regulator, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240
# Score Template Links and tools%idFirst MVNINMFEKEKEILAKRIAGEIVLSPDPGKTMRKWREIFGISQTELADYLGVSSSVISDYEGGRRKSPGASTIRKFVEALIEIDEKRGGNVIKAFSRTFSSEIPTSAILDIREFDIPVTVKDIVDAVKGEIVANPDLIDRKIYGYTVVDSIQAILEMSAEEFLKLYGWTTERALVFTKVTTGRSPMIAVRVQGLKPAMVVLHGVKRLDELAVKIAEKERVPLVVSKAENETELITGLRRLVTSILast
1 -5.130sp|Q6P988|NOTUM_HUMAN Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2  ali   16  38............................GQEMNQFLMHMGFDMQTVAQPQGLEPSELLGMLSNGS................................................................................................................................................................................... 76
2 -4.950sp|Q68CP9|ARID2_HUMAN AT-rich interactive domain-containing protein 2 OS=Homo sapiens GN=ARID2 PE=1 SV=2  ali   10  25............................GPITKHIRLTAALILKNIGKYSECGRRLLKRHEN---AISNMEASSTLAKCLYELN................................................................................................................................................................ 82
3 -4.820tr|A8MXB6|A8MXB6_HUMAN Uncharacterized protein OS=Homo sapiens GN=OPA1 PE=4 SV=1  ali   12  88......................FWPARLATRLLKLR---------LGSAVGGGYTAKKTFDQWKDMIPDLSEYKWI........................................................................................................................................................................ 135
4 -4.480sp|Q9UKA4|AKA11_HUMAN A-kinase anchor protein 11 OS=Homo sapiens GN=AKAP11 PE=1 SV=1  ali   14  2...............QKFAADL-VEKSFGSAFKDLQ--KGVSS-HLAIKLTSSVLQMAFDELRRQRA-KERAISGLANFLVSEALSNALKDLQYVKKQIFTNTVARFAADLAE................................................................................................................................... 103
5 -4.470tr|E7ERZ6|E7ERZ6_HUMAN Uncharacterized protein OS=Homo sapiens GN=KIAA0284 PE=4 SV=1  ali   16  36.........................................................................................................................................................................................................NTGRAWEDLEARINAENEVPILKTSNKEISSILKELRRVQKQL 78
6 -4.210sp|Q6P1X5|TAF2_HUMAN Transcription initiation factor TFIID subunit 2 OS=Homo sapiens GN=TAF2 PE=1 SV=3  ali   10  38...................QSYFLQKTMPVAMALLRDVHNLCPKEVLTFI----DLIKYNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLN................................................................................................................................ 131
7 -4.200tr|E7ESF3|E7ESF3_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZNF692 PE=4 SV=1  ali   23  2..........................RLGGHMCLLKERLGFLHSQLAKFL------LDRYTS...................................................................................................................................................................................... 35
8 -4.170sp|O60313|OPA1_HUMAN Dynamin-like 120 kDa protein, mitochondrial OS=Homo sapiens GN=OPA1 PE=1 SV=3  ali   12  88......................FWPARLATRLLKLR---------LGSAVGGGYTAKKTFDQWKDMIPDLSEYKWI........................................................................................................................................................................ 135
9 -4.100sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sapiens GN=WDR62 PE=1 SV=4  ali   14  8......................TLTESPCRALGDVEASEA-EDHFFNPRLSISTQFLSSLQKASR................................................................................................................................................................................... 49
10 -4.080tr|F5GZV9|F5GZV9_HUMAN Uncharacterized protein OS=Homo sapiens GN=MEFV PE=4 SV=1  ali   11  7.......EQVYYFLEQQ---EHFFVASLEDVGQMVGQIRKAYDTRVSQDIALLDALIGELEA-KECQSEWELLQDIGDIL.................................................................................................................................................................... 75
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.