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Query: [S] COG3592 Uncharacterized conserved protein, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst MEEETLLEQGYRKYRGADVDIYFNTNICAHSGNCVKGNAELFNLDRKPWIMPDNVPKEEAKRVIHTCPSGALQYIEKLast
1 -5.680sp|Q2M385|MPEG1_HUMAN Macrophage-expressed gene 1 protein OS=Homo sapiens GN=MPEG1 PE=2 SV=1  ali   11  26.................PLRLFENLKVCVSQDYELGSRFAVFSCTVGNPLVDPAISRDLGAPSLKKCPGG....... 83
2 -5.300sp|Q2KJY2|KI26B_HUMAN Kinesin-like protein KIF26B OS=Homo sapiens GN=KIF26B PE=1 SV=1  ali   10  78.....................................LEQVWELDSLEYLEALECVTERLESRVNFCKAHLMMIT.. 115
3 -5.270sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8  ali   11  33.DARQEVGVAVHTPQRAPQQGLLSLHPCLYSTLCRGTARDVFHLDSEASVRLTAEQARFFLHGVTLVPIEEFS.... 110
4 -5.120sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2  ali   16  29.................QLWLTLSLNSSSTGNKENGADIFLYNANRIPVISLNQASITSFLTVLAWYPNTLLR.... 84
5 -5.040sp|Q5SWH9|TMM69_HUMAN Transmembrane protein 69 OS=Homo sapiens GN=TMEM69 PE=2 SV=1  ali   20  36MSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTSPCS------FKKQQK--------------QALLARPSSTITY... 89
6 -4.940sp|Q53GD3|CTL4_HUMAN Choline transporter-like protein 4 OS=Homo sapiens GN=SLC44A4 PE=2 SV=2  ali   21  8...........................CPTPQVCVSSCPEVFYTKNRNFCLPGVPWNMTVITSLQQCPSFLLP.... 71
7 -4.900sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2  ali   13  3VSDPNLIHVLVKFLSGTSPHGTNQHSPQVGPTATQAMQEFLTRLQVHLSSTCPQIFSEFLLKLIHILERGAFQ.... 77
8 -4.870sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2  ali   13  48..............SGSVLAGQVNIYSCNYSVLCRSAVIAMYELLADADIQLKGHMARFLLHQVCIIPIEEFS.... 112
9 -4.800tr|E7EUV1|E7EUV1_HUMAN Uncharacterized protein OS=Homo sapiens GN=MUC2 PE=4 SV=1  ali   14  1...............GLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCYFVNCSLSTLEFYNWSCPS........ 55
10 -4.800sp|Q02817|MUC2_HUMAN Mucin-2 OS=Homo sapiens GN=MUC2 PE=1 SV=2  ali   14  1...............GLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCYFVNCSLSTLEFYNWSCPS........ 55

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24