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Query: [S] COG4344 Uncharacterized protein conserved in archaea, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSEYEKEIDELINDYDMLRVLKHFTIAHVDYAKNITRYTEIPQMRVREYLKRLKDLGLLDYYTNTSIKRTEAKLKKSAEVHKHHTYYQINKKAEAVLKEITPKLYVHHLKSADLQMLCSRKERKENPEACSSLLRMGLIDKCYDLTDLGREVFDTARRMQILHCEDRNLast
1 -7.610sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4  ali   16  15..VVDGHLNLPVCKGMMEAMLYHIMTRPGIPESSLLRHYQLQPVAVLELLQGLESLGCIRK........................................................................................................... 75
2 -5.710sp|Q9HCL2|GPAT1_HUMAN Glycerol-3-phosphate acyltransferase 1, mitochondrial OS=Homo sapiens GN=GPAM PE=1 SV=3  ali   11  36VHNFSGPVPEPEYLQKLHKYLITRTERN-----VAVYAESATYCLVKNAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILS............................................................................. 121
3 -5.550sp|Q92794|KAT6A_HUMAN Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2  ali   12  33...............................CNAVSSSHGLDRKTVLEQLELSVKDGTILKVS......................................................................................................... 64
4 -5.530tr|B7Z293|B7Z293_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZMYND11 PE=2 SV=1  ali   15  38...............................TKYMSRVHGMHPKETTRQLSLAVKDGLIVETLTVGCKGSKAGIEQE........................................................................................... 83
5 -5.270sp|Q8WYB5|KAT6B_HUMAN Histone acetyltransferase KAT6B OS=Homo sapiens GN=KAT6B PE=1 SV=3  ali   9  1MVKLANPLYTEWILEAIQKIKKQKQRPSEERIHAVSTSHGLDKKTVSEQLELSVQDGSVLKV.......................................................................................................... 63
6 -5.210sp|Q76L83|ASXL2_HUMAN Putative Polycomb group protein ASXL2 OS=Homo sapiens GN=ASXL2 PE=1 SV=1  ali   15  1MREKGRRKKGRTWAEAAKTVLEKYPN---------------TPMSHKEILQVIQREGLKEIRSGTSPLACLNAMLHTNSRGEEGIFYKVPRMGVYTLKKDVPDGVKEL............................................................ 94
7 -5.180sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4  ali   18  2..............KRRNLIIEAVTNLRMDQEKQEGVSTKCCKKSIVRLVRNLSEEGLLRLYR......................................................................................................... 62
8 -5.170tr|B0QZE2|B0QZE2_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZMYND11 PE=4 SV=1  ali   16  38...............................TKYMSRVHGMHPKETTRQLSLAVKDGLIVET.......................................................................................................... 68
9 -5.030sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=3  ali   12  18.........................................DPEDLKALLKVLHLRGIREKALQKQIQKHLDYITQACLKNKDVAIIELNENEENQVTRDIVE................................................................. 79
10 -4.980sp|Q4G0N8|S9A10_HUMAN Sodium/hydrogen exchanger 10 OS=Homo sapiens GN=SLC9A10 PE=2 SV=2  ali   13  44.KQIKQMLLKQVIRNMEHKELGYLEYDHPEIAVTVKTKEEINVNMATEILKAFGLKGIISKTEGAG...................................................................................................... 112
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;