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Query: [R] KOG3263 Nucleic acid binding protein, from VFDB

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSSRSGEHRRNYAQGRNYESSRSRGDQRDRDYREYRRNYRDERSSRRYEDSQRRDYSPARRRDRYERHRESVREESPRRPVEHERNWQPELKHGRERFRERDYEGRRDRKERRDGVSPFSPEGEGLERKREHEKLQAPSPKEEEERPVDQGDKMDGVKEDKDGSLEVGKSHDAMTRTKSAEEEIVEQEDEATAEMKRIMGFSGFDTTTGKKHGDVGQVYKQKKTKYRQYMNRPGGFNRPLDNELast
1 -8.110sp|A7MCY6|TBKB1_HUMAN TANK-binding kinase 1-binding protein 1 OS=Homo sapiens GN=TBKBP1 PE=1 SV=1  ali   36  33.................................................................................................................................................................................................................................KPRAYGSELYGPGRPLSPR 51
2 -7.530tr|E9PSI1|E9PSI1_HUMAN Uncharacterized protein OS=Homo sapiens GN=TM9SF1 PE=4 SV=1  ali   20  30....................................................................................................................................................................................................................PGVEGVTHYKAGDPVILYVNKVGPYHNPQE.. 59
3 -6.820sp|Q8IZH2|XRN1_HUMAN 5`-3` exoribonuclease 1 OS=Homo sapiens GN=XRN1 PE=1 SV=1  ali   42  1.............................................................................................................................................................................................................................................NFPLPSQ 7
4 -6.060sp|Q96KX1|CD036_HUMAN Uncharacterized protein C4orf36 OS=Homo sapiens GN=C4orf36 PE=2 SV=2  ali   20  78............................................................................................................................................................................................................EREYEVKRLCKLKCQENTSKEIQLLLRERPAGLRRPLPSK 117
5 -5.890sp|Q96GJ1|TRM2_HUMAN tRNA (uracil-5-)-methyltransferase homolog OS=Homo sapiens GN=TRMT2B PE=2 SV=1  ali   18  5..........................................................................................................................................................................................................................KRRVPLHSLRYFISMVGLFSKP.... 26
6 -4.450sp|Q6EMB2|TTLL5_HUMAN Tubulin polyglutamylase TTLL5 OS=Homo sapiens GN=TTLL5 PE=1 SV=3  ali   37  7................................................................................................................................................................................................................................RRVKEENDRRGGFIRP.... 24
7 -4.360tr|E9PDJ8|E9PDJ8_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAT2 PE=4 SV=1  ali   46  10.......................................................................................................................................................................................................................................GLYGGFPFPLEME 22
8 -4.360sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2  ali   46  10.......................................................................................................................................................................................................................................GLYGGFPFPLEME 22
9 -3.990sp|Q8TC92|ENOX1_HUMAN Ecto-NOX disulfide-thiol exchanger 1 OS=Homo sapiens GN=ENOX1 PE=1 SV=1  ali   17  8..........................................................................................................................................................................................ENITQLPQELPQMMAAAADGLGSIAIDTTQLNMSVTDPTAWATAMNNLGGFDTPINP. 92
10 -3.790tr|B9DI78|B9DI78_HUMAN Family with sequence similarity 184, member A OS=Homo sapiens GN=FAM184A PE=4 SV=1  ali   14  10..................................................................................................................................................................................................................ERDQIIKKLIEDNKFYQLELVNRETNFNKVFNSS 43
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.