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Query: [K] COG2378 Predicted transcriptional regulator, from VFDB

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPTDNVVSVVSPYHMEMYNMRKASRLFEIIQILRLARRPVTAQTIADMLEVTARSVYRDIAALQTMRVPIEGERGVGYILRPGFNLPPLMFSIEETEAIVLALAMVDRSGDAELRQAAKKVSDKIAASLPEPLSKTLSANALHAWGSIAPAPAGIDLATVRRAVRDEERLDLCYSDESGVETQRRIRPIAVIYYSETVNIVAWCELRHAIRNFRSDRVLDCAATGSFFKMEGEKLRRLWMSGWQSGQPGGELGRPISGVTLPLast
1 -38.8001j5y_A mol:protein length:187 TRANSCRIPTIONAL REGULATOR, BIOTIN REPRESSOR FAMILY  ali model follow..  17  5.............KIMHMKTVRQERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPR-GYVLAGGKSGVSRLVAVKHAPEEINGGRIVDVIVEHPVYGEIRGIILKFVNLMEMAKTEPLLTLSGGVHLHTIEAPDEETMERIMRELKKKGFL............................................................................................ 177
2 -13.9003ke2_A mol:protein length:117 uncharacterized protein YP_928783.1  ali model follow..  14  17....................KAFLRKLYLAHLMDDAR--HNLLSLGKLTGMPRRTLQDAIASFADIGIEVERHNAGYYRIRTWGPISSAWMD-THVDEVKSLLGVDDAVGQATAGNGA................................................................................................................................................ 117
3 -13.4005way_A mol:protein length:501 Transcriptional activator  ali model follow..  14  7....................KKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSA---IFHSSTNGIRIINT-MVYHHFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRIISQ----------------------------INKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSEKYYFLEW........................................................... 167
4 -12.8003k69_A mol:protein length:162 Putative transcription regulator  ali model follow..  8  1...............GMGGSNMKLDVHSILYLDAHRDSKVASRELAQSLHLNPVMIRNILSVLHKHGY-LTGTVGGGYQLDL----ALADMNLGDLYDLTIPPTISEQADQSPIAANISETLTDLFTVADRQYRAYYHQFTMA....................................................................................................................... 141
5 -12.6004r6i_A mol:protein length:478 Anthrax toxin expression trans-acting positive regulator  ali model follow..  12  12....................KEHIRLINLLHFINEQNRWFTIKELSDYLQVADKTVRKYLKLLEDPSWNLLVQKGKGIYLKESLSFVESKILRKSLNLQICEELVFKKNSMQSLAQKLHLQVGALYPII-NQINYDIQSSHLNI...................................................................................................................... 141
6 -12.5001ylf_A mol:protein length:149 RRF2 family protein  ali model follow..  13  7...................MKISSRVHILSILKNNPSSLCTSDYMAESVNTNPVVIRKIMSYLKQAGF-VYVNRGGGAGLLHEITLLDVYHAVNVVEEDKLFHIHEQPNPDCPIGANIQAVLEIILIQAQSAMEEVLRNITMG....................................................................................................................... 137
7 -12.4002lnb_A mol:protein length:80 Z-DNA-binding protein 1  ali model follow..  13  7.................DPGREGHLEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELK-VSLTSPATWCLGGT................................................................................................................................................................................... 71
8 -12.3004wf2_A mol:protein length:327 Bifunctional ligase/repressor BirA  ali model follow..  11  1...................MKDNTVPLKLIALLANGE--HSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSLPEPIQL----LNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQAPAAAI-GLSLVIGIVMAEVLRKLGADKVRVKW................................................................ 173
9 -12.1001j75_A mol:protein length:67 Tumor Stroma and Activated Macrophage Protein DLM-1  ali model follow..  10  2...............SHMLSTGDNLEQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQVLYRLKKEDR-VSSPEPATWSI...................................................................................................................................................................................... 65
10 -12.0002d1h_A mol:protein length:109 109aa long hypothetical transcriptional regulator  ali model follow..  14  25...........................AVLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIELGL.................................................................................................................................................................................................. 65
11 -11.7002heo_A mol:protein length:67 Z-DNA binding protein 1  ali model follow..  10  2...............SHMLSTGDNLEQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDR-VSSPSPKYWSI...................................................................................................................................................................................... 65
12 -11.6003sqn_A mol:protein length:485 Conserved domain protein  ali model follow..  12  15....................KDLLRQIRLLEQLL-NVPQLTAKRLAAQIQTTERTVFSDLQYIRSQ---SIETDSSGIRLRNQ-ELWSLFLPQSISIQLLKELLFTKELVTTSFLSTSGVSYETLKRHI-KKMNQALRDFHLTIQLTTMT-----------QLIGAESNIRIFYHR...................................................................................... 165
13 -11.4005n08_A mol:protein length:161 HTH-type transcriptional repressor NsrR  ali model follow..  17  12........................RSLMRLAVVRDGDEPLATREVAEVVGVPYTHAAKAITRLQHLGV-VEARRGGGLTLTD----LGRRVSVGWLVRELEGAEVVDAEGDNPAPLRGAARLRRALRDAQEAFYAALDPLTVT....................................................................................................................... 128
14 -11.4005n07_A mol:protein length:161 HTH-type transcriptional repressor NsrR  ali model follow..  17  12........................RSLMRLAVVRDGDEPLATREVAEVVGVPYTHAAKAITRLQHLGV-VEARRGGGLTLTD----LGRRVSVGWLVRELEGAEVVDCEGDNPCPLRGACRLRRALRDAQEAFYAALDPLTVT....................................................................................................................... 128
15 -11.3003v7c_A mol:protein length:329 Biotin ligase  ali model follow..  18  1...................MSKYSQ--DVLQLLYKNKPNISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQ----LPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQS................................................................................................................................... 107
16 -11.3003v7r_A mol:protein length:329 Biotin ligase  ali model follow..  18  1...................MSKYSQ--DVLQLLYKNKPNISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQ----LPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQS................................................................................................................................... 107
17 -11.2004chu_A mol:protein length:163 HTH-TYPE TRANSCRIPTIONAL REGULATOR ISCR  ali model follow..  15  1...................MGRLTSVTAMLDVLNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGL-VSSVRGGGYLLGK----DASSIAVGEVISAVDEVDATRSQGKGGSQGGDKSLTHALWRDLSDRLTGFLNNITLG....................................................................................................................... 128
18 -11.2001qbj_A mol:protein length:81 PROTEIN (DOUBLE-STRANDED RNA SPECIFIC ADENOSINE DEAMINASE (ADAR1))  ali model follow..  16  3.............HMLSIYQDQEQRILKFLEELG-EGKATTAHDLSGKLGTPKKEINRVLYSLAKKG................................................................................................................................................................................................... 55
19 -11.2003mwm_A mol:protein length:139 Putative metal uptake regulation protein  ali model follow..  20  5..............GPPVKGRATRQRAAVSAALQEVEEFRSAQELHDMLAVGLTTVYRTLQSLADAGEVDVLRTAEGYRRCSTGDL................................................................................................................................................................................ 84
20 -11.1004hf1_A mol:protein length:170 HTH-type transcriptional regulator IscR  ali model follow..  14  1................MRLTSKGRYAVTAMLDVNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGL-VSSVRGGGYLLGK----DASSIAVGEVISAVDEVDATRAQGKGGAQGGDKALTHALWRDLSDRLTGFLNNITLG....................................................................................................................... 127
21 -11.1001xd7_A mol:protein length:145 ywnA  ali model follow..  15  6....................SRLAVAIHILSLISMDE-KTSSEIIADSVNTNPVVVRRMISLLKKADI-LTSRAGPGASLKK----DPADISLLEVYRAVQKQEELFAVHENPVGKKIQNALDETFESVQRAMENELASKSLK....................................................................................................................... 128
22 -11.1002o03_A mol:protein length:131 probable Zinc uptake regulation protein FurB  ali model follow..  16  2..............ASAAGVRSTRQRAAISTLLETLDDFRSAQELHDELNIGLTTVYRTLQSMASSGLVDTLHTDTGESVYR.................................................................................................................................................................................... 74
23 -11.0001qgp_A mol:protein length:77 PROTEIN (DOUBLE STRANDED RNA ADENOSINE DEAMINASE)  ali model follow..  15  1.......SLSSHFQELSIYQDQEQRILKFLEELG-EGKATTAHDLSGKLGTPKKEINRVLYSLAKKGK.................................................................................................................................................................................................. 60
24 -10.9003r4k_A mol:protein length:260 Transcriptional regulator, IclR family  ali model follow..  10  2...................MGTVSKALTLLTYFNHGRLEIGLSDLTRLSGMNKATVYRLMSELQEAGFVEQVEGARSYRLPQVLRLAALREASVPILSA--SRRVLRELSEDTGETTHLSLLQGEQLASLSHAYSSRNATKVMMEDAEVLTFHGTASGLAVLAYSEPSFVDAVLAAPLTARTPQTQ............................................................................ 167
25 -10.8002h09_A mol:protein length:155 Transcriptional regulator mntR  ali model follow..  17  36....................ELIDDYVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGL-IEMIPWRGVFLTAGEKLAQESRERHQIVENFLLVLGVSP-------EIARRDAEGMEHHVSEETLDAFRLF.......................................................................................................................... 148
26 -10.8005nl9_A mol:protein length:151 Transcriptional regulator (FUR family)  ali model follow..  8  4MASMKDSYERSKKILEDAGINVTVQRLQMANLLLSKPQHLTADQVFQLINASRATIFNNLKLFAEKGI.................................................................................................................................................................................................. 76
27 -10.7001v4r_A mol:protein length:102 Transcriptional Repressor  ali model follow..  18  29................................LAPGDTLPSVADIRAQFGVAAKTVSRALAVLKSEGL-VSSRGALGTVVEK.................................................................................................................................................................................... 77
28 -10.7001on1_A mol:protein length:142 Transcriptional regulator mntR  ali model follow..  17  4....................PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEY-LIYEKYRGLVLTSGKKIGKRLVYRHELLEQFLRIIGVDE-------EKIYNDVEGIEHHLSWNSIDRIGDL.......................................................................................................................... 116
29 -10.7002htj_A mol:protein length:81 P fimbrial regulatory protein KS71A  ali model follow..  20  4...........................EILEFLN-RHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRG......................................................................................................................................................................................... 52
30 -10.6001sfu_A mol:protein length:75 34L protein  ali model follow..  12  1.........MDLLSCTVNDAEIFSLVKKEVLSLN-TNDYTTAISLSNRLKINKKKINQQLYKLQKEDT.................................................................................................................................................................................................. 58
31 -10.6004hob_A mol:protein length:69 Putative uncharacterized protein  ali model follow..  18  7..................NPISEEMNLKILAYLG-TKQGAKAVHIAQSLGAQRSEVNRHLYRMSEDGR.................................................................................................................................................................................................. 55
32 -10.5005j6x_A mol:protein length:72 Z-DNA binding protein kinase  ali model follow..  25  12.......................EIEMRICDYLR-RHGRSTVQDIFKELKLEKSTVNRHLYSLQASKQ.................................................................................................................................................................................................. 55
33 -10.5003u1d_A mol:protein length:151 uncharacterized protein  ali model follow..  13  23................RRFVLHETRLDVLHQILAQPDGVLSVEELLYRPDETEANLRYHVDELVDRGI.................................................................................................................................................................................................. 75
34 -10.5004i7h_A mol:protein length:163 peroxide stress sensing regulator  ali model follow..  17  19.............HLREKHIRITETRKAIISYMIQSTEHPSADKIYRDLNMSLATVYNNLKVLVDEGFVSELKISND......................................................................................................................................................................................... 87
35 -10.4005y6i_A mol:protein length:267 Transcriptional regulator KdgR  ali model follow..  19  10.............TSGKQKVRSAEVGTDILKALAELSPATSLSRLAEHVGMPASKVHRYLQALIASGFAVQDASTNHYSL---------------REALRVGLAALDSM---DVLKSAAAPLAELRDVLNETC................................................................................................................................. 112
36 -10.4002xrn_A mol:protein length:241 HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGV  ali model follow..  19  1..................SIQVIARAASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGPAGGFRL--------------------PALGQLINQAQTDILSLVKPYLRSLAEELDESVS................................................................................................................................ 97
37 -10.4002xig_A mol:protein length:150 FERRIC UPTAKE REGULATION PROTEIN  ali model follow..  13  18..............IKKNGLKNSKQREEVVSVLYRSGTHLSPEEITHSINTSISSVYRILNFLEKENFISVLETSKSGRRYE------IAAKEHHDHIICLHCGKIIEFADPEIENRQNEVVKK.......................................................................................................................................... 126
38 -10.4004ray_A mol:protein length:145 DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family)  ali model follow..  13  11..............CIDKGMKMTDQRRVIAQVLSDSADHPDVEEVYRRARISIATVYRTVRLFEEESILERHDFGDGRARYE------EAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARK.......................................................................................................................................... 119
39 -10.3004raz_A mol:protein length:145 DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family)  ali model follow..  12  11..............LIDKGLKVTDQRRVIAQVLSDSADHPDVEEVYRRARISIATVYRTVRLFEEESILERHDFGDGRARYE------EAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARK.......................................................................................................................................... 119
40 -10.3005fd6_A mol:protein length:142 Ferric uptake regulation protein  ali model follow..  11  12..............ATERGMRMTEQRRVIARILEDSEDHPDVEELYRRSKISISTVYRTVKLFEDAGIIARHDFRDGRSRYE------TVPEEHHDHLIDLKTGTVIEFRSPEIEALQERIARE.......................................................................................................................................... 120
41 -10.3003mq0_A mol:protein length:275 Transcriptional repressor of the blcABC operon  ali model follow..  8  7VCQGKCMAEDQQSSQISDTVPALRRAVRILDLVAGSPRDLTAAELTRFLDLPKSSAHGLLAVMTELDL-LARSADGTLRI--GPHSLRWANGFLSHLDIVSTFNDHLAQRHDLDPYTVTLTVREGGEVVYIGCRNSAQPLGHTFRIGMRLPAPFTATGKILLSDLGPGELRMLFSQFPQPLTSRSV............................................................................ 189
42 -10.3005whm_A mol:protein length:267 IclR family transcriptional regulator  ali model follow..  16  23...................VTALARGLEVLRCFTPTENTLGNQEIAHKTGLPKPTVSRLTHTLVRLGYLRQDALSGLYQL---------------IGILRLGYAMLSNL---MIRTVASPLMQVLADYAKAAVA................................................................................................................................ 120
43 -10.2004lb5_A mol:protein length:72 Protein kinase containing Z-DNA binding domains  ali model follow..  21  15...........................RICDYLR-RHGRSTVQDIFKELKLEKSTVNRHLYSLQASKQVFKTVEDNKWNLVES................................................................................................................................................................................... 72
44 -10.2002jt1_A mol:protein length:77 PefI protein  ali model follow..  24  1...................MSESIV--KIISIVQDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVNAGKG......................................................................................................................................................................................... 62
45 -10.2004wcg_A mol:protein length:98 ORF112  ali model follow..  16  41.......................EMNLKILAYLG-TKQGAKAVHIAQSLGAQRSEVNRHLYRMSEDGR-VRKHPQ........................................................................................................................................................................................... 90
46 -10.2004cic_A mol:protein length:153 TRANSCRIPTIONAL REGULATOR, BADM/RRF2 FAMILY  ali model follow..  16  3..............MGLKVSTKGHYGVQAMFDLHFGEGPVSLKSIAERQGLSEPYLEQLIAVLRKAGL-VKSVRGGGYILAR----EPRDIKVGDIIRVLEGVESVSQDDPEHSLKFDFSVTKSVWEKVKKSIEEVLDSITLA....................................................................................................................... 134
47 -10.1001uly_A mol:protein length:192 hypothetical protein PH1932  ali model follow..  22  14................IKVMLEDTRR-KILKLLR--NKEMTISQLSEILGKTPQTIYHHIEKLKEAGL.................................................................................................................................................................................................. 62
48 -10.1004mtd_A mol:protein length:171 Zinc uptake regulation protein  ali model follow..  15  17..............CAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCH---------THTSAMFICDRCGAVKEECAEGVEDIMHTLAAK.......................................................................................................................................... 127
49 -10.1002du9_A mol:protein length:129 Predicted transcriptional regulators  ali model follow..  10  22................................LSIDQRVPSTNELAAFHRINPATARNGLTLLVEAGI-LYKKRGIGMFVSAQ---APALIRERRDAAFAATYVAPLIDESIHLGFTRARIHALLDQVAESRGLYKLE............................................................................................................................ 123
50 -10.1003keo_A mol:protein length:212 Redox-sensing transcriptional repressor rex  ali model follow..  15  1........MIMDKSIPKATAKRLSLYYRIFKRFTDGIEKASSKQIADALGIDSATVRRDFSYFGELG-----RRGFGYDVKK--FFAEILNDHSTTNVMLVGCGNIGRA......................................................................................................................................................... 98
51 -10.1004r1h_A mol:protein length:128 Lmo0741 protein  ali model follow..  23  29................................YEAGDKLLSVRELATKLEVNPTTIQRAYAELEETEI-IYTVRGTGKYLTED-EMSKLGINKEKIIAWV.................................................................................................................................................................. 115
52 -10.0002o0y_A mol:protein length:260 Transcriptional regulator  ali model follow..  13  13.............AVADAGVRSVTRVIDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATMCARSV-LTSRADGSYSL...................................................................................................................................................................................... 78
53 -9.9301xn7_A mol:protein length:78 Hypothetical protein yhgG  ali model follow..  15  1...................MASLIQVRDLL----ALRGRMEAAQISQTLNTPQPMINAMLQQLESMG................................................................................................................................................................................................... 44
54 -9.8902k02_A mol:protein length:87 Ferrous iron transport protein C  ali model follow..  14  4.........................LMEVRDMLA-LQGRMEAKQLSARLQTPQPLIDAMLERMEAMG................................................................................................................................................................................................... 44
55 -9.8902fe3_A mol:protein length:145 Peroxide operon regulator  ali model follow..  17  13..............LKETGVRITPQRHAILEYLVNSMAHPTADDIYKALNMSVATVYNNLRVFRESGLVKELTYGDA......................................................................................................................................................................................... 80
56 -9.8704ets_A mol:protein length:162 Ferric uptake regulation protein  ali model follow..  12  24..............LRQGGLKYTKQREVLLKTLYHSDTHYTPESLYMEINVGIATVYRTLNLLEEAEMVTSISFGSA......................................................................................................................................................................................... 93
57 -9.8705h1a_A mol:protein length:270 IclR transcription factor homolog  ali model follow..  10  18...............SPSGDSMLARVVRVLETFNVDRTAQTASDIGRRAALPSSTAHRVVDEMVLVGI-LERGIDGKVRL--GMRLWELALRGSMALRLRQVALPHMERVQQRVREHTQLAVLEHNEVLFLERLSHHEAVSNLARVAGRLPVHASSSGLMLLAHAGPEVREEVLSKPLPRVGPGTV............................................................................ 185
58 -9.8603neu_A mol:protein length:125 Lin1836 protein  ali model follow..  13  31................................WKGEDKLPSVREMGVKLAVNPNTVSRAYQELERAGY-IYAKRGMGSFVTSD-EAKSIGLDDQTAIELL.................................................................................................................................................................. 117
59 -9.8504hf0_A mol:protein length:141 HTH-type transcriptional regulator IscR  ali model follow..  14  1................MRLTSKGRYAVTAMLDVNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGL-VSSVRGGGYLLGK----DASSIAVGEVISAVDEVDATRAQGKGGAQGGDKALTHALWRDLSDRLTGFLNNITLG....................................................................................................................... 127
60 -9.8302p4w_A mol:protein length:202 Transcriptional regulatory protein arsR family  ali model follow..  18  10.................DVLGNETRR-RILFLL--TKRPYFVSELSRELGVGQKAVLEHLRILEEAGL.................................................................................................................................................................................................. 57
61 -9.8203r0a_A mol:protein length:123 Putative transcriptional regulator  ali model follow..  15  32............................MKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEI.................................................................................................................................................................................................. 71
62 -9.8203by6_A mol:protein length:126 Predicted transcriptional regulator  ali model follow..  16  17......................VDRIKNEVAVLSANDQLPSVRETALQEKINPNTVAKAYKELEAQKV-IRTIPGKGTFITGN-ELIKSGVKGERIKKIV.................................................................................................................................................................. 115
63 -9.8106d57_A mol:protein length:161 Ferric uptake regulation protein  ali model follow..  12  23..............LRQGGLKYTKQREVLLKTLYHSDTHYTPESLYMEINVGIATVYRTLNLLEEAEMVTSISFGSA......................................................................................................................................................................................... 92
64 -9.8003ic7_A mol:protein length:126 Putative transcriptional regulator  ali model follow..  30  29................................YEEEGRIPSVREYASIVEVNANTVMRSYEYLQSQEV-IYNKRGIGFFVASG-QLYTLGISIKEIEKMY.................................................................................................................................................................. 117
65 -9.7903irq_D mol:protein length:67 Double-stranded RNA-specific adenosine deaminase  ali model follow..  16  6.......................QRILKFLEELG-EGKATTAHDLSGKLGTPKKEINRVLYSLAKKG................................................................................................................................................................................................... 48
66 -9.7702hr3_A mol:protein length:147 Probable transcriptional regulator  ali model follow..  11  1MPTNQDLQLAAHLRSQVTTLTRRLR-LVVLGAIDRLGGDVTPSELAAAERMRSSNLAALLRELERGGL-RVSLSSEGRRNLYGNRAKRECLDESERALLAAAGPLLTRLAQ....................................................................................................................................................... 143
67 -9.6802rvc_A mol:protein length:64 Interferon-inducible and double-stranded-dependent eIF-2kinase  ali model follow..  20  1...................MSAETQMERKIIDFLRQNGKSIALTIAKEIGLDKSTVNRHLYNLQRSNQ.................................................................................................................................................................................................. 49
68 -9.6604awx_B mol:protein length:84 FERROUS IRON TRANSPORT PROTEIN C  ali model follow..  12  2...................LGSMASLMEVRDMLA-LQGRMEAKQLSARLQTPQPLIDAMLERMEAMG................................................................................................................................................................................................... 48
69 -9.6503tqn_A mol:protein length:113 Transcriptional regulator, GntR family  ali model follow..  20  27................................YVEGEMIPSIRKISTEYQINPLTVSKAYQSLLDDNV-IEKRRGLGMLVKAG................................................................................................................................................................................... 76
70 -9.5803nqo_A mol:protein length:189 MarR-family transcriptional regulator  ali model follow..  15  41......................SRQYMTILSILHLPEEETTLNNIARKMGTSKQNINRLVANLEKNGY-VDVIP-----------------SPHDKRAINVKVTDLGKKVMVTCSRTGINFMADVFHEFTKDELETLWSL.......................................................................................................................... 140
71 -9.5704ham_A mol:protein length:134 Lmo2241 protein  ali model follow..  16  20......................VQKIKEQVVVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEV-IITVKGKGTFIANQ................................................................................................................................................................................... 81
72 -9.5101mkm_A mol:protein length:249 IclR transcriptional regulator  ali model follow..  12  2.................SHMNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGF-VLRKKDKRYVPGYKLHLVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRKRGYAVDNEENEIGIMCV............................................................................ 200
73 -9.5101e2x_A mol:protein length:243 FATTY ACID METABOLISM REGULATOR PROTEIN  ali model follow..  11  17......................EEYIIESIW-FPPGTILPAERELSELIGVTRTTLREVLQRLARDGW-LTIQHGKPTKVNN------ARLDHESVPQLIDNLLSVRNISTIFIRTAFRQHPDKAQEVLATANEDAFAELDYNIFRGLAFASGNPIYGLILNGMKG................................................................................................ 174
74 -9.5002vxz_A mol:protein length:165 PYRSV_GP04  ali model follow..  19  11.......................VRLRDILALLA--DGCKTTSLIQQRLGLSHGRAKALIYVLEKEGRVTRVAFG--VCLSMDQYRQLVDGMIREVERLV.................................................................................................................................................................. 87
75 -9.4601mzb_A mol:protein length:136 ferric uptake regulation protein  ali model follow..  16  19.......................PRVKILQMLDSAEQRHMSAEDVYKALDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFE------LADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRE.......................................................................................................................................... 118
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.