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Query: [G] COG3958 Transketolase, C-terminal subunit, from VFDB

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIKLAPAGLKDDIEMRKVYAGFIAGQIEAGSPIIALEADLMSSMAMDSVARDYPQHVINCGIMEANVIGTAAGLALTGRKPFVHTFTAFASRRCFDQLFMALDYQRNNVKVIASDAGVTACHNGGTHMSFEDMGIVRGLAHSVVLEVTDAVMFADILRQLMDLDGFYWLRTIRKQARSIYAPGSTFTIGKGNVLREGDDITLIANGIMVAEALEAARQLEQEGVSAAVIDMFTLKPIDRMLVKNYAEKTRRIVTCENHSIHNGLGSAVAEVLVENCPVPMRRVGVKERYGQVGTQDFLQKEYGLTAEAIVEAAKSLLLast
1 -83.8002o1s_A mol:protein length:621 1-deoxy-D-xylulose-5-phosphate synthase  ali model follow..  26  311....LPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFL-QRAYDQVLHDVAIQKLPVLFAIDRAGI-VGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYDGPSAVRYPRGNAVGVETPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVAE-----SLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
2 -83.7002o1x_A mol:protein length:629 1-deoxy-D-xylulose-5-phosphate synthase  ali model follow..  21  311.PATGEYVPSSAYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGSGLVEFSRVHPHRYLDVGIAEEVAVTTAAGMALQGMRPVVAIYSTFL-QRAYDQVLHDVAIEHLNVTFCIDRAGI-VGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQTHDGPFAIRYPRGNTAQVAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDLPGVG----VVNARFVKPLDEEMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMNHPTVRVLGIPDEFQEHATAESVHARAGIDAPAIRTVLAELG 622
3 -75.4004kxu_A mol:protein length:637 Transketolase  ali model follow..  31  303MPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNTVPFCSTFAAFFT-RAFDQIRM-AAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATGRILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAV-NRVPRSGKPAELLKMFGIDRDAIAQAVRGLI 620
4 -60.1003m34_A mol:protein length:635 Transketolase  ali model follow..  17  329NKIAYPDFKGKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSTELHSMGDFVEGKNIHFGIREHAMAAINNAFARYGFLPFSATFFIFSE-YLKPAARIA-ALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEPVFGDVKNGAYLLKESKKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFEKQDKAYQERLLGEVIGVEAAHSNELYKFCHK------------VYGI-ESFGESGKDKDVFERFGFSVSKLVNFILS.. 634
5 -59.2002e6k_A mol:protein length:651 Transketolase  ali model follow..  17  341....EPPSFDKPIATRAASGRALNLLAPRLPELLGGSADLTPSNNTDFSRANPLGRYLHFGVREHAMGAILNGLNLHGYRAYGGTFLVFSD-YMRPAIRLA-ALMGVPTVFVFTHDSIALGEDGPTHQPVEHLMSLRAMPNLFVIRPADAYETFYAWLVALRKEGPTALVLTRQAVPLLSPEKARGLLRGGYVLEDEPQGVLVATGSEVHLALRAQALLREKGVRVRVVSLPSFELFAAEAYRKEVLPPGLPVVAVEAGASLGWERYAHKVVA-------------DRFGASAPYPEVYERLGFTPERVAEAFLSLV 651
6 -58.3005nd6_A mol:protein length:693 Transketolase  ali model follow..  17  368......KPEDKGLATRQHSQTMINALAPALPGLIGGSADLAPSNLTDFQKGSYAERNLRFGVREHAMGAICNGIALHGLIPYCATFYIFTD-YMRNAMRMS-ALSEAGVVYVMTHDSIGLGEDGPTHQPIEHLASFRAMPDMLMIRPAGGNETAGAYKVAINRKRPTTIALSRQNMPNIPNCSVEGVAKGAYTIHDTKDVILMGTGSELELATAAAGILEKEGKNVRVVSFPCWELFEEQ-----SAEYKESVLPSDVTARVSVEAATSFGWAKYIGLKGKHVGI-DTFGASAPAPTLYEKFGITVNHVVEAAKATL 684
7 -58.2001ay0_A mol:protein length:680 TRANSKETOLASE  ali model follow..  19  350......TAKDSAVATRKLSETVLEDVYNQLPELIGGSADLTPSNLTSSGSGNYSGRYIRYGIREHAMGAIMNGISAFGYKPYGGTFLNFVS-YAAGAVRLS-ALSGHPVIWVATHDSIGVGEDGPTHQPIETLAHFRSLPNIQVWRPADGNEVSAAYKNSLSKHTPSIIALSRQNLPQLEGSSIESASKGGYVLQDNPDIILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLLSVLPDNVPIMSVEVLA-TTCWGKYAHQSFG-------------DRFGASGKAPEVFKFFGFTPEGVAERAQKTI 664
8 -57.3001r9j_A mol:protein length:673 transketolase  ali model follow..  16  342..EAKLPTNSSAIATRKASENCLAVLFPAIPALMGGSADLTPSNLTRPASSSKEGRYIRFGVREHAMCAILNGLDAHDIIPFGGTFLNFIG-YALGAVRLA-AISHHRVIYVATHDSIGVGEDGPTHQPVELVAALRAMPNLQVIRPSDQTETSGAWAVALSIHTPTVLCLSRQNTEPQSGSSIEGVRHGAYSVVDDLQLVIVASGSEVSLAVDAAKAL-SGELRVRVVSMPCQELFDAQYRQAVLPAGVPVVSVEAYVSFGWEKYSH------------AHVGM-SGFGASAPAGVLYKKFGITVEEVVRTGRELA 655
9 -56.7001itz_A mol:protein length:675 Transketolase  ali model follow..  17  360......TPESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTDFQKDTAEERNVRFGVREHGMGAICNGIALHSFVPYCATFFVFTD-YMRGAMRIS-ALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNETAGAYKVAVNRKRPSILALSRQKLPHLPGTSIEGVEKGGYTISDNSDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYLPAAVTARISIEAGSTLGWQKYV---------GAQGKAIGI-DKFGASAPAGTIYKEYGITVESIIAAAKSF. 675
10 -56.4002r5n_A mol:protein length:669 Transketolase 1  ali model follow..  20  344.FIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTKAINEDAAGNYIHYGVREFGMTAIANGISLHGFLPYTSTFLMFVE-YARNAVRMA-ALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVRQDGPTALILSRQNLAQQERTEANIARGGYVLKDGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDA-AYRESVLPKAVTARVAVEAGIADYWYKYVGLNG----AIVGM-TTFGESAPAELLFEEFGFTVDNVVAKAKELL 663
11 -56.2005hgx_A mol:protein length:697 Transketolase  ali model follow..  18  361......TPADAAVATRKLSEIVLSKIIPEVPEIIGGSADLTPSNLTKAKLGDYSGRYIRYGVREHAMGAIMNGIAAFGYKNYGGTFLNFVS-YAAGAVRLS-ALSEFPITWVATHDSIGLGEDGPTHQPIETLAHFRATPNISVWRPADGNETSAAYKSAIETHTPHILALTRQNLPQLEGSSIEKASKGGYTLVDKADIIIVATGSEVSLAVDALKVLEGQGIKAGVVSLPDQLTFDKEYKLSVLPDGVPILSVEVMSTFGWSKYSH------------QQFGL-NRFGASGKAPEIFKLFEFTPEGVAERAAKTV 675
12 -56.1005vrb_A mol:protein length:667 Transketolase  ali model follow..  20  342TALKEVCAKAETVATRKASQNSIEILAKELPELVGGSADLTPSNLTVSVTRDKGGNYIHYGVREFGMGAIMNGLVLHGVKPFGATFLMFSE-YERNALRMA-ALMKINPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAAKEDHPSCLIFSRQNLKFQEQQLNDIKRGAYVISEGNAQAVIIATGSEVGLAVEAQKVLAGQGIAVRVVSMPSTSVFDRQYQAAVLPEGLPRIAVEAGHTNGWYKYVGLNG---------AVVGI-NRFGESAPADLLFKAFGFTVDNVVDTVKSVL 661
13 -55.3003uk1_A mol:protein length:711 Transketolase  ali model follow..  21  377AIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASVQWGNHINYGVREFGMSAAINGLVLHGYKPFGGTFLTFSD-YSRNALRVA-ALMKVPSIFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVAHQHPSCLIFSRQNLAFNARTDAQLALRDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQD--AEYRERVLPHGVRRVAIEAGVTDFWRKYVGLEG----GVVGI-DTFGESAPAGVLFKHFGFTVEHVIETAKAVL 704
14 -54.3004xeu_A mol:protein length:673 Transketolase  ali model follow..  18  344AYVADVANKGETIASRKASQNALNAFGPLLPELLGGSADLAGSNLTGVSADDAAGNYVFYGVREFGMSAIMNGVALHGFIPYGATFLIFME-YARNAVRMS-ALMKQRVLYVFTHDSIGLGEDGPTHQPIEQLASLRLTPNLDTWRPADAVESAVAWKHAIERDGPSALIFSRQNLPHQVAQVADIARGGYVLKDGEPELILIATGSEVGLAVQAYDKLSEQGRKVRVVSMPCTSVYEQQDESVLPVEVGARIAIEAAHADYWYKYVGLDG---------RIIGM-TSFGESAPAPALFEHFGFTLDNVLAVAEELL 665
15 -53.6001um9_B mol:protein length:324 2-oxo acid dehydrogenase beta subunit  ali model follow..  25  2..........ALMTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSG-LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFRLYRSVKEEVPEEDYTLPIGKAALRREGKDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLAPPIRVTGFDTPYPYA----QDKLYLPTVTRILNAAKRAL 322
16 -53.1003kom_A mol:protein length:663 Transketolase  ali model follow..  15  345..IASQLSNPVKVATRKASQMVLEVLCKNMPEMFGGSADLTGSNNTNWSNTQEGANYLSYGVREFGMAAIMNGLSLYGIKPYGGTFLVFSD-YSRNAIRMS-ALMKQPVVHVMSHDSIGLGEDGPTHQPIEHVPSLRLIPNLSVWRPADTIETMIAWKEAVKSDTPSVMVLTRQNLMPVVQTQHQVA-GYLVKDNPDAKLTIVATGSEVELAVKVANEFEKKGIKLNVASIPCVEVFATQ------AHEYKKTVIKDDIPAVFVEMAQPDMWYK-PKAGGEVKGI-YSFGESAPAEDLFKRFGFTVENISNIVAKYV 663
17 -52.3003rim_A mol:protein length:700 Transketolase  ali model follow..  19  369......EPGSKALATRAASGAVLSALGPKLPELWGGSADLAGSISTKEYTAHWYGRTLHFGVREHAMGAILSGIVLHGTRAYGGTFLQFSD-YMRPAVRLA-ALMDIDTIYVWTHDSIGLGEDGPTHQPIEHLSALRAIPRLSVVRPADANETAYAWRTILNGSGPVGLILTRQGVPVLDGTDAEGVARGGYVLSDAGDVILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPY-EYRDAVLPPTVSARVAVEAGVAQCWHQLVGDTG----EIVSI-EHYGESADHKTLFREYGFTAEAVAAAAERAL 698
18 -52.0004c7v_A mol:protein length:681 TRANSKETOLASE  ali model follow..  19  356..ILPQYGEDDSIATRAASQKAINALAKEVSSLWGGAADLASSNKTDFQPESYEGRNIWFGVREFGMACAMNGIMLHGTRIFGSTFFVFSD-YLKAAIRLS-AIQKLPVIYVLTHDSVAVGKDGPTHEPIEQLASLRTIPNVQVFRPADGNETSAAWKVALELDKPTILVLSRQNLDTLPISKEKVFDGVEK-AENEADGILIATGSEVGLALKAKEELQKKGKDVIVVSLPSWERFEAQSEE-IPPELKKRMTIEAGTTYG---------WAKYAGDHGVMIGI-DEFGMSAPSDIVLRELGMSVENIVDKYLE.. 674
19 -51.7003hyl_A mol:protein length:690 Transketolase  ali model follow..  20  363..NLPTYELGSKAATRNSSGAVINAIAESVPSFFGGSADLAGSNKTDFTRDDYSGKNIWYGVREFAMGAAMNGIALHGLKTYGGTFFVFSD-YLRPAIRLA-ALMQLPVTYVFTHDSIAVGEDGPTHEPIEQLAALRAMPNVSVIRPADGNESVAAWRLALETNKPTALVLTRQDLPTLEGAKDDTYEKVSASKKETADVILLATGSEVSLAVEAQKALAVDGVDASVVSMPSMDRFEAQTA-EYKESVLPKAVTKRFAIEMGATFGWHRYVGLEG----DVLGI-DTFGASAPGEKIMEEYGFTVENVVRKVKEML 684
20 -47.1003duf_B mol:protein length:325 Pyruvate dehydrogenase E1 component subunit beta  ali model follow..  20  2..........AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRY----ITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAEAPVLRVAAPDTVYPFAQ---AESVWLPNFKDVIETAKKVM 323
21 -46.6002j9f_B mol:protein length:350 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT  ali model follow..  17  11..EPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAA-DLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECEAPISRVCGYDT------PHIFEPFYIPDKWKCYDALRKMI 340
22 -46.4001l8a_A mol:protein length:886 Pyruvate dehydrogenase E1 component  ali model follow..  15  487.......EQSKEISTTIAFVRALNVMLKNKDRLVPIIADEARTFGMEGLKEDEKGQILQEGINELGAGCSWLAAATSYMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERENVYYYITTLNENYHMPAMPEGAEEGIRK--GSKGKVQLLGSGSILRHVREAAEILAKDGVGSDVYSVTSFTELARDGQDCETPRVPYIAQVMNDAPAVASTDYMKLFAEQ-PADDYRVLGT-DGFGRSDSRENLRHHFEVDASYVVVAALGEL 856
23 -45.7001ni4_B mol:protein length:341 Pyruvate dehydrogenase E1 component: Beta subunit  ali model follow..  19  2.....RGSGSLQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSG-IVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGLDAPAVRVTGADVPMPYAKI--LEDNSIPQVKDIIFAIKKTL 333
24 -45.1001ik6_A mol:protein length:369 pyruvate dehydrogenase  ali model follow..  23  35..DKMVAGVVMMANMAKAINMALHEEMERDERVVVLGEDVGKKGGVFLVTEGLPERVIDTPLNEGGILGFAMGMAMAGLKPVAEIQFVDFIWLGADELLNHIASGGNYKAPLVVRTPVGSGTRGGLYHSNSPEAIFVHTPGLVVVMPSTPYNAKGLLKAAIRGDDPVVFILYRAPREEVPEGDYVVEIGKARVAREGDDVTLVTYGAVVHKALEAAERV---KASVEVVDLQTLNPLDFDTVLKSVSKTGRLIIAHDSPKTGGLGAEVRALVAEKATAPVIRLAGPDVPQSPIA---ADAAYAPTVERIIKAIEYVM 361
25 -40.2002bp7_B mol:protein length:339 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT  ali model follow..  17  2........ATTTMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLKSRVFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSEMA-GEFIAPLTLRMPCGGGIYGGQTHSQSPE-AMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAE---ESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCEAPIERVTGWDTPYPHAQEWAYFP----GPSRVGAALKKVM 337
26 -38.3003ahc_A mol:protein length:845 Xylulose 5-phosphate/fructose 6-phosphate phosphoketolase  ali model follow..  13  413..VKEYGHGWGQVEAPRALGAYCRDIIKNNPSFRIFGPDETASNRLNATYEVTVTGQVTEQLSEHQCEGFLEAYLLTGRHGIWSSYESFVHVIDSMLNQHAKRKPISSVNLLVSSHVWRQDHNGFSHQDPGVTSLLINKHVTNIYFATDANMLLAISEKCFKSTNINAIFAGKQPAPTWVTLDEARAELEAGAANDEVQVVLASAGVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELPVLFAYHSYAQDVRGLIYDRNHDNFHVVGY-KEQGSTTTPFDMVRVNDMDRYALQAAALKLI 779
27 -34.7003ai7_A mol:protein length:831 Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase  ali model follow..  12  406.........WGQLEATRTLGAYTRDIIKNNPDFRIFGPDETASNRLQASYEVTVSGQVVEQLSEHQMEGFLEAYLLTGRHGIWSSYESFVH-VIDSMLNQHAKWLEASMNLLVSSHVWRQDHNGFSHQDPGVTSVLLNKHVIGIYFATDANMLLAIAEKCYKSTNINAIIAGKQPAATWLTLDEARAELEKGAANDEAEVVLAAAGDPTQEIMAASDKLKELGVKFKVVNVADLLSLQSEALTDEEFADIFTADKPVLFAYHSYAHDVRGLIYDRNHDNFNVHGY-EEEGSTTTPYDMVRVNRIDRYELTAEALRMI 765
28 -16.8003ju3_A mol:protein length:118 Probable 2-oxoacid ferredoxin oxidoreductase, alpha chain  ali model follow..  20  12...................................................................................................................................................................................................KEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESN-YTAQAAQMIKLYTGIDIKNKILKYN--------GRH--------MTEDEILKSAKEIL 116
29 -13.9005c4i_A mol:protein length:395 Oxalate oxidoreductase subunit alpha  ali model follow..  11  9...................GCVAVAHGLADVDVICSYPIRPYTGIMSELARMVADGELDAEFGEHAQLSVVYGASAAGARVFTGSSGVGVTYAM-EVYSPISGERLPVQMAIADRTLDPPGDFGEEH---TDAECCR---GWIQGWASTPQEALDNTLIYYRVGEDQRVLLP--DGYFVSHILGPVDIPDEAQVKDDAEVIIFGQGAHMETAKAVARRLRNLGEKVGVARLRTFRPFPTEQIKERLSKFKAIGVLDVSANFGISGGVLLSELRAALYDYGDKVKTVGFVAGLGGEV-------VTHDEFYRMFQKLK 376
30 -13.7001yd7_A mol:protein length:395 2-keto acid:ferredoxin oxidoreductase subunit alpha  ali model follow..  16  20...............DEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQM--DEIASIAAAIGASWAGAKAMTATSGPGFSLMQ-ENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQG--DIMQAI---SLIVLSPSTVQETIRAFNLSEKYRTPVIL-VGHMRERVYIPNPDEIEIINRKLPREDAEIGVVATGIVARSALRAVKMLREEGIKAGLLKIETIWPFDFELIERIAERVDKLYVPEMN--LGQLYHLIKEGANGKAEV-----------------KLISKIGGHTPMEIFEFIRREF 388
31 -13.0005b46_A mol:protein length:628 2-oxoacid--ferredoxin oxidoreductase alpha subunit  ali model follow..  15  294...............................................................ELAAINMAVGAALTGVRSATATSGPGFSLMS-EGISWAGMNEVPVVITYYMRGAPATG---PTRSGQADLKFAL----RIVIASGDHVEAIWALNLAEKYQTPVIHIISINRMKMYEKRNKKLETADKEIPEGDADIVLLTWGSPKGAILDAMEELSKDGIKTMMVQVKMFNPYPKNLMKKILSGKSKIIAVENN-YNAQGAEVLAEKTGIFATNYILKWT--------GRP--------ITREEVIEGIKKIL 615
32 -10.9005b48_A mol:protein length:627 2-oxoacid--ferredoxin oxidoreductase alpha subunit  ali model follow..  14  259..............................SDESVYIEAHQDVLMEDPITGDKKKGTIVVVQAEDEAINMAIGAALTGVRAATATSGPGFSLMV-EGLGWAGMNEVPVVITYYIRGGPSTG---PTRTAQSDLIFPI---PKIVLASGDHAEAIWALNLAEKYQTPVIHLVEKSEDVVNRTMMYEKRMKKLEVADLNSRNLIITWGSPTGVLRDI---LEESNFDFTLLQIRMFSPFPKNLVSKLMEGRDKIITVEGNY-LAQTSLLVKMYTGKDVTNSILKWN--------GRP--------FLRDELEEALIKVI 614
33 -10.7001b0p_A mol:protein length:1231 PROTEIN (PYRUVATE-FERREDOXIN OXIDOREDUCTASE)  ali model follow..  10  11....................TATAHVAYAMSEVAAIYPITPSSTMGEEADDWAAQGRKNI--SEAGAAGAVHGALAAGALTTTFTASQGLLLMI--PNMYKISGELLPGVFHVTARAIA-AHALSIFGDHQDIYAARQT-GFAMLASSSVQEAHDMALAAIESNVPFYFQGREAANPYYLKVPGIVATGRSYKLAPDAERVIVSMGSSCETIEEVINHLAAKGEKIGLIKVRLYRPFVSEAFFAALASAKVITVLDRTKEPGAPGDPLLDVCSAFVERGEAMPKILAGRYGLGSKE-------FSPAMVKSVYDNMS 382
34 -10.4006cin_A mol:protein length:1171 PYRUVATE-FERREDOXIN OXIDOREDUCTASE  ali model follow..  11  9...................NTAAAHVAYAMSEVATIYPITPSSPMAEIADEWAAHGRKNI--SEAGAAGAVHGSLAAGALTTTFTASQGLLLMI--PNMYKIAGELLPCVFHVAARALS-THALSIFGDHADVMAARQT-GFAMLSSASVQEVMDLALATLKARVPFVFRTSHEVQKIDVIEYEDMATGRHYHLAPDAERVIVSMGSSCEVIEETVNYLVEKGEKVGLIKVRLFRPFSAEHFLKVLASVKRIAVLDRTKEPGSLGEPLYEDVQTVLAEHGKNILVVGGRYGLGSKE-------FNPSMVKAVFDNLA 380
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.