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Query: [R] COG4624 Iron only hydrogenase large subunit, C-terminal domain, from VFDB

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDALIRPPMSFFADLPKDNKKCIKIGSPLALSLSDCLACSGCVSADEAGALSEDLSFVLDLSPQTSFVLSPQSKINIFNLYREDGMEYREFEAVLSSFLRSKFNIHRIVDTSYLRSKIYEETYREYMATNHLIVSACPGVVTYIERTAPYLIGYLSRVKSPQQMAFSLVKGSRTVSVMPCQDKKLENGRDGVKFDFILTTRGFCKALDSLGFRRPARASGKSLCSMEEAETTQWNIGTSSGGYAEFILGKHCVVETREIRNGIKEHLLDDGRTISQITGLENSINYFKSSKTKGPRHKMTEIFLCKNGCIGGPGQERVNDVEMDIREYDRNGREQPRIFYSSPGLEEKRVFREVKAKRVDLRVDWLast
1 -85.8001hfe_L mol:protein length:421 PROTEIN (FE-ONLY HYDROGENASE (E.C.1.18.99.1) (LARGER SUBUNIT))  ali model follow..  20  21.DPDKLHFVQIDEAKCIGCDTCSQYCPTAAPHIEACINCGQCLTHCPENAIYEAQSWVKDGKVKCIAMPAPAVRYALGDAF---GMPVGSVTTGKMLAALQKLGFAHCWDTEFTADVTIWEEGSEFVERLPQFTSCCPGWQKYAETYYPELLPHFSTCKSPIGMNGALAKTYGTVSIMPCIAKKYEGLRPELDIDATLTTRELAYMIKKAGIDFAKLPDGKRDS-LMGESTGGATIFGVTGGVMEAALRFAYEAVTGKKPDSWDFKAVGTDVKVAVVHGAKRFKQVCDDVKAGKSPYHFIEYMACPGGCVCGGGQPVMPGVLEAMDRTTTRLGLKKRLAMASANKA................... 421
2 -78.6004r0v_A mol:protein length:514 Fe-hydrogenase  ali model follow..  18  10......AAVSIRGSSCRARQVAPR-APLAASTVRGNVACAAAAPAAEAPLSHVQQALAEPTRKHVCVQVAPAVRVAIAETL---GLAPGATTPKQLAEGLRRLGFDEVFDTLFGADLTIMEEGSELLHRLPMFTSCCPGWIAMLEKSYPDLIPYVSSCKSPQMMLAAMVKSYLMVSIMPCTRKQSEADRDWFQLDHVITTVELGNIFKERGINLAELPEGEWDN-PMGVGSGAGVLFGTTGGVMEAALRTAYELFTGTPLPRLSLSEVRITLRVAVANGLGNAKKLITKMQAGEAKYDFVEIMACPAGCVGGGGQPRSTDKAITQKRQAANLDEKSTLRRSHENPSIRELYDTYLGEPLGHKAH. 478
3 -73.8003lx4_A mol:protein length:457 Fe-hydrogenase  ali model follow..  18  2..............................GSSSQDPNSAAPAAEAPLSHVQQALAKDDPTRKHVCVQVAPAVRVAIAETL---GLAPGATTPKQLAEGLRRLGFDEVFDTLFGADLTIMEEGSELLHRLPMFTSCCPGWIAMLEKSYPDLIPYVSSCKSPQMMLAAMVKSYLMVSIMPCTRKQSEADRDWFQLDHVITTVELGNIFKERGINLAELPEGEWDN-PMGVGSGAGVLFGTTGGVMEAALRTAYELFTGTPLPRLSLSEVRITLRVAVANGLGNAKKLITKMQAGEAKYDFVEIMACPAGCVGGGGQPRSTDKAITQKRQLYNLDEKSTLRRSHENPSIRELYDTYLGEPLGHKAH. 432
4 -70.9004xdc_A mol:protein length:584 Iron hydrogenase 1  ali model follow..  20  134..DERSKSLTVDRTKCLLCGRCVNACGKKCFDDTNCLLCGQCIIACPVAALSEKSHMLNAPEKHVIVAMAPSVRASIGELF---NMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRFPMFTSCCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKNVFTVTVMPCTSKKFEADRPQMDIDAVITTRELAKMIKDAKIPFAKLEDSEADPAM-GEYSGAGAIFGATGGVMEAALRSAKDFAENAELEDIEYKQVNNKYNVAVINGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPIKKVRASVLYNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAH. 565
5 -20.9001hfe_S mol:protein length:123 PROTEIN (FE-ONLY HYDROGENASE (E.C.1.18.99.1) (SMALLER SUBUNIT))  ali model follow..  9  4...................................................................................................................................................................................................................................................................................................ASITRRGFLKVACVTTGAALIGIRMTGKDYMLDRINGVYGADAKFPVRASQDNTQVKALYKSYLEKPLGHKSH. 85
6 -18.4005zji_C mol:protein length:81 photosystem I subunit VII  ali model follow..  18  4........SVKIYDTCIGCTQCVRACPTDVLEMEDCVGCKRCESACPTDFLSVRVYLGPETTRSMALS......................................................................................................................................................................................................................................................................................................... 80
7 -18.3002wsc_C mol:protein length:81 PHOTOSYSTEM I IRON-SULFUR CENTER  ali model follow..  18  4........SVKIYDTCIGCTQCVRACPTDVLEMEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLA......................................................................................................................................................................................................................................................................................................... 80
8 -18.3002vkr_A mol:protein length:103 ZINC-CONTAINING FERREDOXIN  ali model follow..  18  30VLGIHGTIVGVDFDLCIADGSCITACPVNVFQWYDCIFCMACVNVCPVAAIDVK....................................................................................................................................................................................................................................................................................................................... 101
9 -18.1005t5i_G mol:protein length:82 Tungsten formylmethanofuran dehydrogenase subunit fwdG  ali model follow..  16  1....MAIGLKAYPELCHGCGNCVIACPVNALRSPECGKCGTCVESCPVDAIRLEELE.................................................................................................................................................................................................................................................................................................................... 82
10 -18.0005zgb_C mol:protein length:81 PsaC  ali model follow..  16  4........TVKIYDNCIGCTQCVRACPLDVLEMEDCVGCKRCETACPTDFLSIRVYLGGETTRSMGLA......................................................................................................................................................................................................................................................................................................... 80
11 -18.0001xer_A mol:protein length:103 FERREDOXIN  ali model follow..  18  30VLGIHGTIVGVDFDLCIADGSCINACPVNVFQWYDCIFCMACVNVCPVAAIDVK....................................................................................................................................................................................................................................................................................................................... 101
12 -18.0004kt0_C mol:protein length:81 Photosystem I iron-sulfur center  ali model follow..  16  5.........VKIYDTCIGCTQCVRACPLDVLEMEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLA......................................................................................................................................................................................................................................................................................................... 80
13 -17.9001k0t_A mol:protein length:80 PSAC SUBUNIT OF PHOTOSYSTEM I  ali model follow..  17  5..........KIYDTCIGCTQCVRACPLDVLEMEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLA......................................................................................................................................................................................................................................................................................................... 79
14 -17.8001jb0_C mol:protein length:80 PHOTOSYSTEM I IRON-SULFUR CENTER  ali model follow..  17  5..........KIYDTCIGCTQCVRACPTDVLEMEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLA......................................................................................................................................................................................................................................................................................................... 79
15 -17.7001bqx_A mol:protein length:77 PROTEIN (FERREDOXIN)  ali model follow..  8  3........VITEPCIGTKCASCVEVCPVDCIHEDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYI............................................................................................................................................................................................................................................................................................................ 68
16 -17.6001jnr_B mol:protein length:150 adenylylsulfate reductase  ali model follow..  9  2.......PSFVNPEKCDGCKACEYICPNDLMTLDKCWECYSCVKMCPQGAIDVRVDYSPLGGACVPMRGTSDIMWTVKYRNGKVLRFKFAIRTTPWGSIQPFEGFPEPTEEALKSELLAGEPEIIGTSEFPQVKK...................................................................................................................................................................................................................................... 148
17 -17.3001ff2_A mol:protein length:106 FERREDOXIN I  ali model follow..  13  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDDALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
18 -17.3001a6l_A mol:protein length:106 FERREDOXIN  ali model follow..  14  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEKKDPLPDAED........................................................................................................................................................................................................................................................................................ 93
19 -17.3001pc4_A mol:protein length:107 Ferredoxin I  ali model follow..  14  1.......MAFVVTDNCIKCKDCVEVCPVDCIHPDECIDCALCEPECAAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 85
20 -17.2006cfw_N mol:protein length:139 NADH-plastoquinone oxidoreductase subunit  ali model follow..  17  31VPEDFRGKLVYNVDKCVGCRMCVTVCPAGVFVYLRCVMCKQCVDVCPTAALQMSDEFLLASYDKYDAKLI....................................................................................................................................................................................................................................................................................................... 111
21 -17.2001b0v_A mol:protein length:106 PROTEIN (FERREDOXIN)  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIHPDECNDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
22 -17.1001ftc_A mol:protein length:106 FERREDOXIN  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
23 -17.1001fd2_A mol:protein length:106 FERREDOXIN  ali model follow..  12  3..........VVTDNCIKCKDCVEVAPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL............................................................................................................................................................................................................................................................................. 104
24 -17.1001fri_A mol:protein length:106 FERREDOXIN  ali model follow..  14  3..........VVTDNCIKCKDCVEVCPVNCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEKKDPLPDAED........................................................................................................................................................................................................................................................................................ 93
25 -17.0001frm_A mol:protein length:106 FERREDOXIN  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDCALCAPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
26 -17.0001b0t_A mol:protein length:106 PROTEIN (FERREDOXIN I)  ali model follow..  16  3..........VVTDNCIKCKKCVEVCPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITED................................................................................................................................................................................................................................................................................................. 84
27 -17.0001g6b_A mol:protein length:106 7FE FERREDOXIN I  ali model follow..  16  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDCALCESECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
28 -17.0001g3o_A mol:protein length:106 7FE FERREDOXIN I  ali model follow..  15  3..........VVTDNCIKCKDCVEECPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
29 -16.8001gao_A mol:protein length:106 FERREDOXIN I  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDCASCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
30 -16.8001frl_A mol:protein length:106 FERREDOXIN  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIHPDSCIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
31 -16.7003gyx_B mol:protein length:166 Adenylylsulfate Reductase  ali model follow..  17  2........TYVDPSKCDGCKACMYICPNDLMILEACWECYSCIKICPQGAITARPYADFAPMGGTCIPLRGS..................................................................................................................................................................................................................................................................................................... 82
32 -16.7001d3w_A mol:protein length:106 FERREDOXIN 1  ali model follow..  15  3..........VVTDNCIKCKECVEVCPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
33 -16.7001f5c_A mol:protein length:106 FERREDOXIN 1  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
34 -16.7001f5b_A mol:protein length:106 FERREDOXIN 1  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
35 -16.6002fd2_A mol:protein length:106 FERREDOXIN  ali model follow..  16  3..........VVTDNCIKCKDCVEVCPVDAIHPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
36 -16.6001frk_A mol:protein length:106 FERREDOXIN  ali model follow..  15  3..........VVTDNCIKCKDCVEVCPVDCIDPDECIDCALCEPECPAQAIFSEDEVPEDMQNAELAEVWPNITEK................................................................................................................................................................................................................................................................................................. 84
37 -16.4002v2k_A mol:protein length:105 FERREDOXIN  ali model follow..  19  3..........VIAEPCVDVKACIEECPVDCIHPDECVDCGACEPVCPVEAIYYEDDV.................................................................................................................................................................................................................................................................................................................... 60
38 -16.1001clf_A mol:protein length:55 FERREDOXIN  ali model follow..  25  3..........KIADSCVSCGACASECPVNAISQGDCIDCGNCANVCPVGAPVQE....................................................................................................................................................................................................................................................................................................................... 55
39 -15.8001fdn_A mol:protein length:55 FERREDOXIN  ali model follow..  18  3..........VINEACISCGACEPECPVNAISSGDCIDCGACAGVCPVDAPVQA....................................................................................................................................................................................................................................................................................................................... 55
40 -15.7001fca_A mol:protein length:55 FERREDOXIN  ali model follow..  15  3..........VINEACISCGACEPECPVDAISQDTCIDCGACAGVCPVDAPVQA....................................................................................................................................................................................................................................................................................................................... 55
41 -15.7001rgv_A mol:protein length:80 ferredoxin  ali model follow..  12  3..........YINDDCTACDACVEECPNEAITPTKCSECVQCRLVCPADCIPDNPDYRETREELQ............................................................................................................................................................................................................................................................................................................ 72
42 -15.6002zvs_A mol:protein length:85 Uncharacterized ferredoxin-like protein yfhL  ali model follow..  12  3..........LITKKCINCDMCEPECPNEAISMDKCTECPTCQKVCPIPNTIVKDPAHVETEEQLWD.......................................................................................................................................................................................................................................................................................................... 74
43 -15.5001h98_A mol:protein length:78 FERREDOXIN  ali model follow..  17  3..........VICEPCIGVKSCVEVCPVECIHPEECIDCGACVPACPVNAIYPEEDV.................................................................................................................................................................................................................................................................................................................... 60
44 -15.4001bc6_A mol:protein length:77 7-FE FERREDOXIN  ali model follow..  12  3..........VITEPCIGTKSCVEVCPVDCIDPDVCIDCGACEAVCPVSAIYHEDFV.................................................................................................................................................................................................................................................................................................................... 60
45 -15.4001dur_A mol:protein length:55 2[4FE-4S] FERREDOXIN  ali model follow..  18  3..........VINDSCIACGACKPECPVNCIQEDSCIDCGSCASVCPVGAPNPE....................................................................................................................................................................................................................................................................................................................... 54
46 -15.3005c4i_B mol:protein length:315 Oxalate oxidoreductase subunit delta  ali model follow..  13  255.........IIDREACTECYTCWIYCPDSCITRTECKGCGLCTAVCPSGALTNVPELDFKD................................................................................................................................................................................................................................................................................................................ 315
47 -15.1006g2j_I mol:protein length:212 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial  ali model follow..  16  110............EERCIACKLCEAICPAQAITIEKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEA.......................................................................................................................................................................................................................................................................................... 199
48 -15.0005lc5_I mol:protein length:176 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial  ali model follow..  15  74............EERCIACKLCEAVCPAQAITIEKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEA.......................................................................................................................................................................................................................................................................................... 163
49 -15.0005xtb_B mol:protein length:176 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial  ali model follow..  16  74............EERCIACKLCEAICPAQAITIEKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEA.......................................................................................................................................................................................................................................................................................... 163
50 -15.0003eun_A mol:protein length:82 Ferredoxin  ali model follow..  24  3..........MITDECINCDVCEPECPNGAISQGDCTECSQCVEVCPVDAIIKDPSHEETEDE.............................................................................................................................................................................................................................................................................................................. 70
51 -14.9005gpn_b mol:protein length:212 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8  ali model follow..  15  110............EERCIACKLCEAVCPAQAITIEKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEA.......................................................................................................................................................................................................................................................................................... 199
52 -14.7001blu_A mol:protein length:82 FERREDOXIN  ali model follow..  22  3..........MITDECINCDVCEPECPNGAISQGDCTECSQCVEVCPVDCIIKDPSHEETEDE.............................................................................................................................................................................................................................................................................................................. 70
53 -14.7002fug_9 mol:protein length:182 NADH-quinone oxidoreductase chain 9  ali model follow..  15  49...........GLEKCIGCSLCAAACPAYAIYVERCIFCGLCEEACPTGAIVLGYDFEMADYEYSDLVYGKEDMLV................................................................................................................................................................................................................................................................................................. 138
54 -14.4003exy_A mol:protein length:82 Ferredoxin  ali model follow..  22  3..........MITDECINCDGCEPECPNGAISQGDCTECSQCVEVCPVDCIIKDPSHEETEDE.............................................................................................................................................................................................................................................................................................................. 70
55 -14.3002fgo_A mol:protein length:82 Ferredoxin  ali model follow..  16  3..........KITDDCINCDVCEPECPNGAISQGECTECPQCQQVCPVDCIPLDDANVESKDQ.............................................................................................................................................................................................................................................................................................................. 70
56 -13.7006gcs_I mol:protein length:229 TYKY SUBUNIT (NUIM)  ali model follow..  14  127............EERCIACKLCEAICPALAITIDKCIYCGYCQESCPVDAIVETPNVEYATETREELLYNKEKLLANGDKWE........................................................................................................................................................................................................................................................................................... 215
57 -12.9005t5i_F mol:protein length:349 Tungsten formylmethanofuran dehydrogenase subunit fwdF  ali model follow..  12  256VTKPFEGELIIDQDTCQACETCVMVCPCNVLSFRFCIYCGACERSCPVTAITVKRNRINTTPIRSKFDSLLK..................................................................................................................................................................................................................................................................................................... 349
58 -12.4004z3w_E mol:protein length:179 Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein  ali model follow..  15  78.......KFIIDGKEYDECGFCRASCPSRDLFREKCDLCDGCVKWCLVGALSVTEREVEEPDESVKRTEMEIGLESLISRFGA.......................................................................................................................................................................................................................................................................................... 165
59 -12.1004ydd_B mol:protein length:333 DMSO reductase family type II enzyme, iron-sulfur subunit  ali model follow..  9  134............PRMCNHCTKCLEACPNEAIHQDKCKGAQACVQSCPYAKPY---------------------------------FNPLTNKANKCIGCFPRIE----------------------QGVAPACVAQCVGRAMHVDDVNSSVYKLIKQYKVALPLHPEFGTEPNVFYVPPVLGPRIEMANGEPSTDPKIPLAQLEGLFGK............................................................................................................................................................ 291
60 -11.9004ras_A mol:protein length:704 Oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein  ali model follow..  12  493TTDL-RPIDFGLQDFCNQCRKCARECPCNAISFGDCTKCGRCMKMCPWN----REDTVEGRRLAELSIKVPEARAAIIAMDDALQLEVIDGVAGAPRMGTNERDLSPDRGDKIGANQKLAMYPRLQPPPGTTLDAVLP-----VDRSGG--LAEYAAAETPAAARARLKSS.................................................................................................................................................................................................. 696
61 -11.7006cz7_B mol:protein length:234 4Fe-4S ferredoxin, iron-sulfur binding domain protein  ali model follow..  13  43.GTFPDVKYTYIPTLCNHCDDCVKVCPTGAQNNDECIGCKKCMNACPYGVISFNAATPHRRWQDDSEVVANGTVSPLMLLKRTGATATPNENPERGDTYPMIRPKRTTEKCTFCDHRL--------KGLNPACVDACPSEARV-----------IGDLDDPQSKVSQLIKLHKPMQLKPEAGTGPRV.................................................................................................................................................................................. 222
62 -11.5001q16_B mol:protein length:512 Respiratory nitrate reductase 1 beta chain  ali model follow..  9  181............PRLCEHCLNCVATCPSGAIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKPRIEAGQPTVCSETCVGRIRYLGV---LYDADAIERAASTENEKDLYQRQLD---VFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVW--YVPPLSPIQSAADAGELGSNGIIPVQYLANLL--------------------------------TAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLAQAQEMYRYLAIANYEDRFVEAFPEKNGC-DGCH................................................... 485
63 -11.1002ivf_B mol:protein length:352 ETHYLBENZENE DEHYDROGENASE BETA-SUBUNIT  ali model follow..  11  137.GKWPNPFFFYLARMCNHCTNCLAACPTGAIDQERCKGHRHCVEACPYKAIYFNPVSQTSEKPRIEKGIANACNRQCPGRVRAFG---------------------YLDDTTSHVHKLVKKWKVALPLHAEYGTG--PN-IYYVPPMGARGFGEDGEITDKTRIPLDVLEGLFGPEVKRVLAVNMRAGRGSELMDLLISKKWSDRF............................................................................................................................................................... 341
64 -11.0006fah_A mol:protein length:396 Caffeyl-CoA reductase-Etf complex subunit CarE  ali model follow..  8  2.......AIKVIEEKCIGCSKCQKSCPFDAITIENCTNCGTCIDVCPTEAILQEGTEKIVRDLSVFAEQREGKIMPVVFELLGEGKKLANEIGTELCAILCGSNVAELTDFAYGADKVYLADAPELEKYTT--DGYSKIINEAIGLYKPEIV--YGATHIGRDLAPCLAVKVNTGLTADCTKLEIDPDDKKIRQTRPAFGGNLMATIVGSRPQMSTVRPGVMDKAAYDPSQKGEVI------LDATFNEGDIRTKVLEIVKTTTDNISISDADFIVSGG--------MGLGKPEGFELLKQLADKLGGTVATS.................................................... 309
65 -10.7005odc_C mol:protein length:184 Heterodisulfide reductase, subunit C  ali model follow..  7  32.............KACYQCGTCTGSCPSGRRDIWKCTTCYTCYERCPRDVKVTEIIKTI-RNLAAQKGNMAKAHKMTAMYVLKYGHAVP--ANKNTAELRKSIGLSEKAPIAQFSEKDLNEMNTLIKE............................................................................................................................................................................................................................................. 166
66 -10.1002vpw_B mol:protein length:195 NRFC PROTEIN  ali model follow..  11  44.GEYPNLVVEFRPEQCLHCENCVPVCPTGAVDPKKCIACGACIAACPYDARYLHPAGYVSKKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDVLRP....................................................................................................................................................................................................................................................................... 167
67 -9.6303cf4_A mol:protein length:807 Acetyl-CoA decarboxylase/synthase alpha subunit  ali model follow..  7  415.............AKCADCGACLLACPEFEEIHDTCIGCRRCEQVCKKEIPILNVIEKIAQKQIAEEKGLMRAGRGQVSDAEIRAEG-LNLVMGTTPGIIAIIGCPNYAGGTKDVYYIAEEFLK---RNFIVVTTGCGAYERFPGGFQCGGLANIGSCVSNAHITGAAEK------VAAIFAQRTLEGNLAEIGDYILNR------VGACGLAWGAFSQKASSIGTGCNIFGIPAVLGPHS-LIAKTYEEDKWKVYDARNGQEMPIPPAPEFLLTTAETWQEAIPMMAKACIRPSD-HWMELH-------------KKYLGGKEPEDWWKFVRTEADLPLATREALLKEL-----EKEHGWEIDW 778
68 -9.5701kqf_B mol:protein length:294 FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-SULFUR SUBUNIT  ali model follow..  11  86.EQNGKLEWLIRKDGCMHCEDCLKACPSAGFQSENCIGCGYCIAGCPFNIPRLNVDRVSVGQEPACVKTCPTGAIHFGT.............................................................................................................................................................................................................................................................................................. 188
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.