FFAS03 results for COG5501

Query: [S] COG5501 Predicted secreted protein, from VFDB

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270`
#	Score	Template	Links and tools	%id	First	`MKLILALIPVTLTASLALAEPEKPNNPLADGTTWRDLKGDVVGEAAILDGSALFSVTAPYRANDAATVPVTIEQTDAAADPIESLKLVIDENPAPVAAEIRFGPAMAPLKFETRVRVNQYSNIRAIAETPRGIFMHGRFVKASGGCSAPATKDPVAALKDMGEMRLKLFGGKGEVQKARREAQIMIRHPNYSGLQRDQITQLFVSAKFITELVVKQGDELLFALDGGISISENPVFRFSYTDNGAPDFTVHAVDTDGNVFDRVLPKTPPA`	Last
1	-51.700	`4uwq_B mol:protein length:136 SOXY PROTEIN`	`ali model follow..`	21	1	`.................MRGSGSQGLEGEDLEHLEQALKEVFGKGFKDTPSDAVKLNMPAIAESGANVPAEVEVALP-KEQVRAIHLFADKNPTPHILAFM--PMKAEPYYATRVRLAETTAIRAVVETQDGLLLASASTRVTVGGCG..........................................................................................................................`	130
2	-51.700	`2oxg_Y mol:protein length:124 SoxY protein`	`ali model follow..`	27	2	`..........................RGSGSSTVDELTAAFTGGAATG--EGGLTLTAPEIAENGNTVPIEVKA-----PGAVAIMLLAAGNPEPAVATFNFGPAAADQRAATRIRLAQTQDVIALAKMADGVVKAQTTVKVTIGGCG..........................................................................................................................`	117
3	-51.400	`2nnc_A mol:protein length:124 Sulfur covalently-binding protein`	`ali model follow..`	18	2	`.....................GSWSEKAFSASKLDDAIAAKFGSLPIQESTA-IQIKAPEIAENGAFVPVTVATSIPG---ATNISIFTPANFSPMVASFDVLP-RMKPEVSLRMRMAKTENLVVVVQAGGKLYRAVREVKVTIGGCG..........................................................................................................................`	123
4	-46.900	`4uwq_C mol:protein length:108 SOXZ`	`ali model follow..`	24	1	`................................................................................................................................................................MPFRTIARLNPAKPKAGEEFRLQVVAQHPNEPGTRRDA-EGKLIPAKYINLVEVYFEGEKVAEARPGPSTSANPLYAFKFKAEKAGTFTIKLKDTDGDTGEASVKLELA.`	108
5	-44.300	`2ox5_Z mol:protein length:108 SoxZ protein`	`ali model follow..`	20	1	`..............................................................................................................................................................ADDAKPRVKV--PSSAKAGETVTVKALISHKMESGQRKDA-DGKLIPRSIINRFTCELNGVNVVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIAVA.`	108
6	-28.400	`4bk8_A mol:protein length:124 DESULFOFERRODOXIN, FERROUS IRON-BINDING REGION`	`ali model follow..`	19	16	`..........................................GEAISKAETHTPKIEAPEKVKADQPFQVRVSVPNEAAHSIRWIELYFYEEGRPFLGRVAFEPGYAEPDVTFTLKLKKSGVLYAISYCNHGLWEARKEIKV................................................................................................................................`	123
7	-19.700	`2amu_A mol:protein length:143 Putative superoxide reductase`	`ali model follow..`	14	26	`......................................................VIEAPEKVKKDEKVQIVVTVPNTTEHHIRWIKVFFQPDGDPYVQGPNIGAVYTEPTVTTVVKLNRSGTIIALSYCNHGLWESSQKITVE...............................................................................................................................`	136
8	-13.900	`4bff_A mol:protein length:125 SUPEROXIDE REDUCTASE`	`ali model follow..`	8	2	`.......................................ELFQTADWKKEKHVPVIEVLRAEGGVVEVKVSVGKPNTTEHHIAWIELVFQPEGSKFVDGPNTSGVYTDPVAVFAFKAEKSGKLTAFSYCNHGLWMGEATLSL................................................................................................................................`	124
9	-12.400	`2hvb_A mol:protein length:124 Superoxide reductase`	`ali model follow..`	6	5	`..................................................................................................................................................AKVIGMLKETIRSGDWKGEKHVPVIEYEREGDLVKVEVSVPHPNT-------------PEHHIAWIELYFHPEGGQFPILHSDPLTEPRAVFFFKTSKKGKLYALSYCNIHGLWENEVQLE...`	124
10	-12.300	`4d7p_A mol:protein length:111 SUPEROXIDE REDUCTASE`	`ali model follow..`	12	13	`..................................................ERTKEKHVPEMKLSGNHVDIRCGAPATEKHYIGTIRLFGITKVTLELGCQQIWPGLGEPVASFRVDLEKYKGLLAVAYCNHGCWENYMEL..................................................................................................................................`	111
11	-11.700	`1do6_A mol:protein length:124 SUPEROXIDE REDUCTASE`	`ali model follow..`	8	8	`................................................SGDWKGEKHVPEYEREGELVKVKVQVPNTTEHHIRYIELYFLPEHGESVNGPNTSDVYTEPIAYFVLKTKKKGKLYALSYCNHGLWENEVTLE.................................................................................................................................`	124
12	-10.900	`4bv1_A mol:protein length:109 NEQ011`	`ali model follow..`	13	1	`...............................................MIKTEYNPKHSPEIEKEGELYKITIEVPNEPSHHIQWVDLYFEPEGK-HIARIEFKAHGEEPKAIVYAKLEGKGKLIAISYCTHGLWKTEKEL..................................................................................................................................`	109
13	-9.270	`3pdd_A mol:protein length:190 Glycoside hydrolase, family 9`	`ali model follow..`	12	2	`.....................................................VTIDSPV---AGERFDINISATVKSKTPVSKVEFYNGDTLI--------SDTTAPYTAKITGAAVGAYNLKAVAVLSDGRRIESPVTPVLVKVIVKPTVKLTAPKSN-----------VVAYGNEFLKITATASDSDGK----------------ISRVDFLVDGEVI-------SDREAPYEYEWKAVEGNHEISVIAYDDDDAA-PDSVKIFVKQ`	180
14	-9.010	`4aw7_A mol:protein length:591 GH86A BETA-PORPHYRANASE`	`ali model follow..`	11	380	`..............................................AFKDGGRLYIALDNLDDNPQTVYLNNKNSWKDVSNVTKRSLYVNYNAGIEYTEQNVPSMPESISIVPNLVADVSSSAFTNSIIRNKYYSSEYLKPISAG--SSLSFPFTGIESGSGRASLRMSIGRPVSASKKPVVKI-------NGTAV--------------SVPDNWKGYGQSNRNIFFGMIEVP-FDIQLLKNGDNNVDITFSDGGGHVSSMILQV....`	579

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster