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Query: [F] KOG1567 Ribonucleotide reductase, beta subunit, from VFDB

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGDPERPEAAGLDQDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADFLast
1 -112.0003hf1_A mol:protein length:351 Ribonucleoside-diphosphate reductase subunit M2 B  ali model follow..  100  1MGDPERPEAAGLDQDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 351
2 -105.0002uw2_A mol:protein length:332 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 SUBUNIT  ali model follow..  81  1...................SMTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGPMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENSFTLDADF 332
3 -104.0002p1i_A mol:protein length:349 Ribonucleotide reductase, small chain  ali model follow..  54  2..AEVVNISKSASFSKQEKEFSDFQKSKESNEKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKHVLAFFAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAK-WINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQKSGVMAQRKEQVFSLNTDF 349
4 -102.0001jk0_B mol:protein length:345 ribonucleoside-diphosphate reductase small chain 2  ali model follow..  44  2........EAHNQFLKTFQKERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKN-IPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSDYQKASDMSKSATPEINFDDDF 345
5 -99.2001h0n_A mol:protein length:390 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE  ali model follow..  76  44....ASKAARRIFQDSAELESKAPTNPSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSNSTENSFTLDADF 390
6 -94.9001jk0_A mol:protein length:419 ribonucleoside-diphosphate reductase small chain 1  ali model follow..  61  59KEKLSKDAENHKAYLKSHQVHRHKLKEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNMNENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQKAGVMSKSTKQEFTFNEDF 413
7 -92.3002vux_A mol:protein length:326 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 B  ali model follow..  95  2...SSGVDLGTENLYFQSMSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTN............................. 320
8 -90.4004bmo_A mol:protein length:322 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA  ali model follow..  20  2.......................................RAVNWNKKEDDFSLMFWKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEI-DDIFDWVDNHPLLEKKAGIITSYYRVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQGKLTASGEIINLIIRDESIHGVFVGILAQQIFAELSAKETQELLMELYEIEMAYTEEIYTS---IGLVEDVNRFVRYNANKGLMNLGLEPKFEEEEPIVLNGLRTDTKNHDFFSVKGNGYVKATNVEKLADDDFVFN... 321
9 -89.6002o1z_A mol:protein length:311 Ribonucleotide Reductase Subunit R2  ali model follow..  53  1..ADVLNISKIPIFSKKEKKFSDLQKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERMNLFHAIENIPAVKNKALWAAK-WINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMD...................................... 310
10 -87.8004n83_A mol:protein length:319 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  19  1..................................MQTYYKAINWNAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDWRKLSHKEKDLVGKVFGGLTLLDTLQSESGVDALRKDVRTAHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEI-DEIFAWTNTNPYLQKKAEIINEIYL--NGTALEKKIASVFLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLAFNELPEEWMYDLLYTLYENEEGYTESLYDT---VGWTEEVKTFLRYNANKALMNLGQDPLFPDSAPIVMNGISTGTSNHDFFSQVGNGYLLGEVEAMQDDD-YNYG... 318
11 -87.5003n37_A mol:protein length:319 Ribonucleoside-diphosphate reductase 2 subunit beta  ali model follow..  17  1.................................MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDV-DAAYAWSEENAPLQRKAQIIQQHYR--GDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLSFAFDLLLELYDNELQYTDELYAE---TPWADDVKAFLCYNANKALMNLGYEPLFPAEMAILAALSPNADENHDFFSGSGSSYVMGKAVETEDE-----DWNF 319
12 -87.3001kgn_A mol:protein length:329 Ribonucleotide reductase protein R2F  ali model follow..  18  2........................SNEYDEYIANHTDPVKAINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQI-NEAFRWSEENENLQRKAKIIMSYYN--GDDPLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAYTFDLMYDLYENEIEYTEDIYDD---LGWTEDVKRFLRYNANKALNNLGYEGLFPTDETILSSLSPNADENHDFFSGSGSSYVIGKAEDTTDD-----DWDF 329
13 -87.3003vpm_A mol:protein length:286 Ribonucleoside-diphosphate reductase subunit M2  ali model follow..  82  1..........................MGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEAVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFM....................................... 286
14 -86.7004d8f_A mol:protein length:366 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  24  1MGSSSSGLVPRGSHMQADILDGKQKRVNNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSEIDLNKEKNFFETRVIEYQHAASLT............. 359
15 -86.5006ebo_A mol:protein length:355 Ribonucleoside-diphosphate reductase, beta subunit  ali model follow..  16  2....GSSSSGLVPRGSTKNYYDRSVSPVEYAYFDQSQNMRAINWNKIVDEKDLEVWNRVTQNFWLPENIPVSNDLPSWNELDDDWQQLITRTFTGLTLLDTVQSSIGDVAQIKNSLTEQEQVIYANFAFMVGVHARSYGTIFSTLCTSEQI-EEAHEWVVDNEALQARPKALIPFYT--ADDPLKSKIAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNFYSGYKYQLKVAKLSPQFVFDLLDKMIGLEKTYLHQLYDG---FGLADEAIRFSLYNAGKFLQNLGYESPFTKEAPEVFAQLSARAENHDFFSGSGSSYIIGTSEETLDE-----DWDF 349
16 -86.3002rcc_A mol:protein length:346 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  20  3.............EQLQKRKIYDTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDYSMR-AAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKERIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPETFVKTTLMKAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEHNPMKWIRAYVNSGKSDFFEQKSRQYAKVSADNGFDE......... 345
17 -85.4006gp2_A mol:protein length:345 Ribonucleoside-diphosphate reductase beta chain  ali model follow..  17  2........HMASMAKIKNQYYNESVSPIEYAQQGFKGKMRSVNWNVVNDEKDLEVWNRITQNFWLPEKIPVSNDLTSWRTLTPEWQELITRTFTGLTLLDTIQATVGDVAQVPNSLTDHEQVIYTNFAFMVAVHARSFGSIFSTLCSSEQIEEAHEWVINTETLQERAKALI---PYYVNDDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLSPEFVFKLLYELIDLEKAYLKELYED---FGLADDAIRFSVYNAGKFLQNLGYDSPFTEEEPEIFTQSARADENHDFFSGNGSSYIMGVSEETEDD-----DWEF 345
18 -84.7001r2f_A mol:protein length:319 PROTEIN (RIBONUCLEOTIDE REDUCTASE R2)  ali model follow..  18  1.................................MKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEV-DAAYAWSEENPPLQRKAQIILA--HYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSALFALDLLMELYDNEIRYTEALYAE---TGWVNDVKAFLCYNANKALMNLGYEALFPPEMAILAALSPNADENHDFFSGSGSSYVMGKTVETEDE-----DWNF 319
19 -84.3001mrr_A mol:protein length:375 RIBONUCLEOTIDE REDUCTASE R1 PROTEIN  ali model follow..  20  1................AYTTFSATKNDQLKEPMFFGQPVQVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAENGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDQECYDLFVQAAQQEKDWADYLFRDGMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRNPIPWINTWSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS---NF 373
20 -84.3004dr0_A mol:protein length:350 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  19  3.....................SSSSGLVPRGSHMMTKIYDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQMIVGIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEFAIDLLNQLYENELEYTEDLYDQ---VGLSHDVKKFIRYNANKALMNLGFDPYFEEEDINPIVGLNTKTKSHDFFSMKGNGYKKATVEPLKDDD-FYFEDE. 340
21 -82.5001uzr_A mol:protein length:296 RIBONUCLEOTIDE REDUCTASE R2-2 SMALL SUBUNIT  ali model follow..  17  2.............................TGNAKLIDRVSAINWNRLQDEKDAEVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEI-DDAFRWSEENRNLQRKAEIVLQSYR--GDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDDYTYELLFELYDNEVEYTQDLYDE---VGLTEDVKKFLRYNANKALMNLGYEALFPRTDVNPAILSALSPNAD.............................. 296
22 -82.0001pj0_A mol:protein length:375 Ribonucleoside-diphosphate reductase 1 beta chain  ali model follow..  19  1................AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFFRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLESIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAENGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDQECYDLFVQAAQQEKDWADYLFRDSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRNPIPWINTWSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS---NF 373
23 -80.7001biq_A mol:protein length:375 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  19  1................AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFDDIVTNEQIQKRAENGKTVTVSLRELKKKLYLCLMSVNALEAIRYYVSFACSFAFAERELMEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADKQECYDLFVQAAQQEKDWADYLFRDSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTSNPIPWINTWSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS---NF 373
24 -76.6006cwo_A mol:protein length:344 Ribonucleotide reductase  ali model follow..  17  1....................MGSSSSGLVPRGSHMSIFDKRVNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHALSLAEKTAVKNSLLAIAQIEVAVKSFWGN-IYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDEFEKLLDVPVIRRRVDYLSNVLKDTKSQDNRKYMVSLILFSILIENVSLFSQFAILLSFRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPDALVRETVKDSIAVESDILDWIFEEEIESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDYFEEEVFANSLDDFFAKRPVEYTKHDKSI-------TANDLF 338
25 -75.6001pfr_A mol:protein length:340 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  20  1................AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAENGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVAFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADKQECYDLFVQAAQQEKDWADYLFRDGMIGLNKDILCQYVEYITNIRMQAVGLDLPFQRSNPIPWINTW.................................... 338
26 -71.3005olk_A mol:protein length:430 Ribonucleoside-diphosphate reductase, beta subunit 1  ali model follow..  14  98.........................RNKRALERKTNIFEKRINLKPYEYPELNEYVAAIRHSYWIHTEFNFTSDIQDFKTGLSEVERSAIKNTMLAISQIEVAVKTFWGDVHHRLPKPEIAAVGATFAESEVRHHDAYSHLLEILGLNEEFKELKKKPVIMKRVHYLETSLKHAKSDDDREYTESILLFALFIEHVSLFSQFLIIMAFKHKNMLKGISNAVEATSKEEQIHGDFGVDIINIIKKENPNNLIKEMCLNSFEAESKVVDWIFEKELDFLPKAVINEFLKNRFNKSLEAIGLEKLFDIDEALLFDDEIIGTKHGDFFVKRSINYSKRTQSI-------TSDDLF 430
27 -66.0003ee4_A mol:protein length:323 Probable ribonucleoside-diphosphate reductase  ali model follow..  14  1................................MAGMTRTRSGSLAAGGLNWPLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNADPSPAAQVRASVTYNHIVEGMLALTGYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDATRMNELIPLALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVASPAQLED--------TFADEDRRTLAAASA............... 317
28 -63.0004hr0_A mol:protein length:316 Ribonuleotide reductase small subunit  ali model follow..  15  2........................AVDDDDKMVHHDGFQTVKATIDWEHPMFKLYEKAKRNGKWNPADIDFSQDQKDFASLTSEEKISALPLVAGFSAGEEAVTLDILPMAHARQGRLEDVLFLTTFMHDEAKHVEMFSRWQQAVGIGQMDLSVFHNDHYKRIFYEALPEAMNRADDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIKKAGLFPGLLQGIDYLNMDEGRHIQFGIYTIQRIVNEDERELFIRYMDELWPHVIGYVDYLTETYALEIDYDLLRHYVIKQFNLRKKQISRTKRVDVVEGLEKTAAES................................... 310
29 -43.5005uxg_A mol:protein length:220 aldehyde deformylating oxygenase  ali model follow..  13  2.........................................................................D-KNWFSTPQEIREGIKYLSAHFYPASIMDRWKILK-KLSFEKAKIIANYSLQQVIEEIEHFDFFNEYFKEDPLTTVRLP---------PSYIKLFDGLVEDFQSSRWRENIATRFHMITEGVLATVGLKILNETSRKYNLLKFNEGIKRIIEDEARHVSFGLSLIEDKEYAVKR--VEELFPLAVQIVKEGKDKIEP---LGYSIQELVNLMEELKKARINKI...................................................... 209
30 -32.3005ux2_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  12  1..........................................................................MTQLDFASAAYREAYSRINGVVIVGEGLANRHFQMLARRI---PADRDELQRLGRMEGDHASAFVGCGRNLGVVADLPLARRLFQPLHDLFKRHD--------HDGNRAECLVIQGLIVECFA-----VAAYRHYLPVADAYARPITAAVMNDESEHLDYAETWLQRHFDQVKARVSAVVVEALPLTLAMLQSLAADMRQIGMDPVETLASFSELFREALESVGFEA.................................................. 211
31 -30.1005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  11  3.....................................................................QLTDQSKELDFKSETYKDAYSRINAIVIEGEQEAHENYITLAQLL---PESHDELIRLSKMESRHKKGFEACGRNLAVTPDLQFAKEFFSGLHQNFQTAA--------AEGKVVTCLLIQSLIIECFAIA-----AYNIYIPVADDFARKITEGVVKEEYSHLNFGEVWLKEHFAESKAELELANRQNLPIVWKMLNQVEGDAHTMAMEKDALVEDFMIQYGEALSNIGFST.................................................. 218
32 -29.6004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  11  1....................................................................MPELAVRTEFDYSSEIYKDAYSRINAIVIEGEQEAYSNYLQMAELL---PEDKEELTRLAKMENRHKKGFQACGNNLQVNPDMPYAQEFFAGLHGNFQHAF--------SEGKVVTCLLIQALIIEAFA-----IAAYNIYIPVADDFARKITEGVVKDEYTHLNYGEEWLKANFATAKEELEQANKENLPLVWKMLNQVQGDAKVLGMEKEALVEDFMISYGEALSNIGFST.................................................. 217
33 -28.8004kvr_A mol:protein length:244 Aldehyde decarbonylase  ali model follow..  11  2...........................................................MPTLEMPVAAVLDSSEALPDFTSDRYKDAYSRINAIYIEGEQEAHDNYIAIGTLL---PDHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPLRDNFQTAL--------GQGKTPTCLLIQALLIEAFAIS-----AYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNT.................................................. 231
34 -28.7005uwz_A mol:protein length:243 Aldehyde decarbonylase  ali model follow..  11  1....................................................................MNRTAPSAALDYRSDTYRDAYSRINAIVLEGEREAHANYLTLAEML---PDHAEALKKLAAMENRHFKGFQSCARNLEVTPDDPFARAYFEQLDGNFQQAA--------AEGDLTTCMVIQALIIECFAIA-----AYNVYIPVADAFARKVTEGVVKDEYTHLNFGQQWLKERFVTVREGIERANAQNLPIVWRMLNAVEADTEVLQMDKEAIVEDFMIAYGEALGDIGFSM.................................................. 218
35 -28.3004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  12  1....................................................................MPQLEASLELDFQSESYKDAYSRINAIVIEGEQEAFDNYNRLAEML---PDQRDELHKLAKMEQRHMKGFMACGKNLSVTPDMGFAQKFFERLHENFKAAA--------AEGKVVTCLLIQSLIIECFAIA-----AYNIYIPVADAFARKITEGVVRDEYLHRNFGEEWLKANFDASKAELEEANRQNLPLVWLMLNEVADDARELGMERESLVEDFMIAYGEALENIGFTT.................................................. 217
36 -27.6002inn_C mol:protein length:333 Phenol hydroxylase component phL  ali model follow..  8  66.......................................RMEDWCAVSDPRYYGAYVGNRAKMQESAEFGFCEKRNLLTRLSEETQKQLLRLLVPLRHVELGANMNNA-KIAGDATATTVSQMHIYTGMDRLGIGQYLSRIALMIDGSTGAALDESKAYWMDDEMWQPMRKLVEDTLVVDDWFELTLVQNILIDGMMYPLVYDKMDQWFESQGAEDVSMLTEFMRDWYKESLRWTNAMMKAVAGESETN--RELLQKWIDHWEPQAYEALKPLAEASVGIDGLNEARAELSARLKKFELQS.................................................. 328
37 -27.1004pgi_A mol:protein length:250 Aldehyde decarbonylase  ali model follow..  11  14...................................................................DSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLL---PDHVEELKRLAKMEMRHKKGFTACGKNLGVKADMDFAREFFAPLRDNFQTAL--------GQGKTPTCLLIQALLIEAFAI------AYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREELLEANRENLPLIRRMADQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNT.................................................. 231
38 -25.4005k53_A mol:protein length:262 aldehyde deformylating oxygenase  ali model follow..  12  24.................................................................SEFMPQLEASPTIDFQTETYKDAYSRINAIVIEGEQEAHDNYLTLAELL---ADKKAELVGLSKMENRHMKGFQACGRNLKVTPDMAFAKQFFSELHKNFQTAA--------AQGQIVTCLLIQSLIIECFAIA-----AYNIYIPVADDFARKITEGVVKEEYSHLNFGEVWLQAHFEESKAELEAANRQNLPIIWKLLNAVADDARVLGMEKDALIEDFMIAYGEALGNIGFNN.................................................. 243
39 -25.0005k52_A mol:protein length:265 Aldehyde decarbonylase  ali model follow..  14  24.................................................................SEFMPQLEATAAIDYQSETYKDAYSRINAIVIEGEDEAANNYVRLAE---LMPEQSEELASLAKMEARHKKGFTACGKNLNVTPDMDFAKKFFSDLHGNFQVAA--------AAGNIVTCLLIQALIIEAFAIS-----AYNVYIPHADDFARKITENVVKDEYLHLNFGEQWLKANFESAKDE-LERANRENLAIVWRMLDEVAGDLVLGMEKEALMEDFTIAYQEALQNIGFST.................................................. 243
40 -24.0003dhg_A mol:protein length:500 toluene 4-monooxygenase hydroxylase alpha subunit  ali model follow..  11  29................................................FPERMSGHMGIPLEKWESYDKAALERAKIYENSDPGWISTLKSHYGAIAVGEYAAVTGEG-RMARFSKAPGNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAWRAYHSNEWAAIAAKHFFDDIITGRDAISVAIMLTFSFETGFTNMQFLGLAADAAEAGDYTFANLISSIQTDESRHAQQGGPALQLLIENGKREEAQKKVDMAIWRAWRLFAVLTGPVMDYYTKEFMYEWIIGQFERSLIDLGLDKPWYWDLFLKDIDELHHSYHMGVWYWRTTAWWNPAAGVTPEERDW-LEEKY 362
41 -23.6003pvr_A mol:protein length:311 Phenylacetic acid degradation protein paaA  ali model follow..  7  2.........................................................RSTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITR-APTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDI---------YQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAA-----IVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQMLQDAINRFWWPALMMFARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMT................................................... 241
42 -23.3004iit_A mol:protein length:320 Phenylacetate-CoA oxygenase subunit PaaA  ali model follow..  7  14..................................................................QRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITR-APTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDL---------YQKMLDGQMKYSSIFNYPTLSWADIGVIGWLVDGAA-----IVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGNEAQMLQDAINRFWWPALMMFARSMAWKIKLHSNDELRQRFVDNTVPQVEILGMT................................................... 244
43 -23.2004mud_A mol:protein length:235 Ring oxydation complex/ phenylacetic acid degradation related protein  ali model follow..  10  2.......................................................................MQKLRSVKEVPQDLTNTLVNIIELRADFELAMVEQYSPWLVN-APTVDSRLFVAKLVSDELNHGWQLVRLLEEFKVKDVIERI---------SNARLGIHKLEVSNLPLFNWEDVIAFTFLVDGAG-----LYQLKILKDCSFEPLSTLASSMIKEEESHIFFSQNELRNYQNKNRMQGAINAVEMLHMTWSLNETHLRDLNISDLTKNDLINGYIKTTNEELKKCGYN................................................... 220
44 -21.3001za0_A mol:protein length:275 POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)  ali model follow..  11  16.................................................PVVEANMTRHLDT-WFAHDY--FLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFILEDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANE-----------DVRVQHVMKGYRAEKYTQVETLVYMAFYE----RCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLDVLGADIEAYRDKLQNVADA-KPQLRQLISDRITAWGLAGEPSLKQFV.......................................... 273
45 -21.3001t0q_A mol:protein length:498 toluene, o-xylene monooxygenase oxygenase subunit  ali model follow..  11  28...............................................LFPEEMSGARGISMEAWEKYDKAALERDGFVDRADPGWVSTMQLHFGAIALEEYAASTA-EARMARFAKAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWAAIAARSFFDDMMMTRDSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVENGKKDEAQQMVDVAIWRSWKLFSVLTGPIMDQSFKEFMLEWIVAQFERQLLDLGLDKPWYWDQFMQDLDETHHGMHLGVWYWRPTVWWDPAAGVSPEEREW-LEEKY 362
46 -20.3001mhy_D mol:protein length:521 METHANE MONOOXYGENASE HYDROXYLASE  ali model follow..  11  4.......SLATKAATNRAPVGVEPQEVHKWLQSFNWDFKENRTKYPTKYHMTKEQFKVIAKEYARMEA-DGLTRLGAGNKVHPRWGETMKVISNFLEVGE-YNAIAASAMLWDSATAAEQKNGYLAQVLDEIRHTHQCAFINHYYSKHYHDPAGHNDARRAIGPLWKGMKRVFADGFISGDAVECSVNLQLVGEACFTNPLIVAVTEWASANGDEITPTVFLSVETDELRHMANGYQTVVSIANDPASAKFLNYFTPVLGYLFEYGSKFKVEPWVKTWNRWVSEDWGGIWIGRLGKYGVESPRSLRDAKRDAYWAHHDLALAAYAMWPLGFARLALPDEEDQAWFE..... 368
47 -20.0002jcd_A mol:protein length:345 N-OXIDASE  ali model follow..  11  1ISEFDSGETMREEQPHLATTWAARGWVEEEGI------------GSATLGRLVRAWPRRALVPDYPLEIVPFAEHPLFLAAEPHQRQRVLTGNERVIATEQLIAEPAFDLVMHGVDDPLIRKSVQQAIVDESFHTYMHMLAIDRT---RELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCI---NALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLPIALEAFAEQDLS-----------------ALLLELNAAGIRG.................................................. 292
48 -18.7001t0q_B mol:protein length:330 toluene, o-xylene monooxygenase oxygenase subunit  ali model follow..  5  56...............................................TWYKKYCFDSPLKHDDWVQGLFDQLNDRGHDQMLTREWVETLARFYTPARYLFHALQMG-SVYIHQIAPASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERDENDPAWQGFRELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQLGSLAQSEGDTLLGLLAQAQKRDAERHRRWSSALVKMALEKENREVLQKWVAKWEPLADKAIEAYCS---ALPDGENAIVEAKSASRYVRQMMGL.................................................... 330
49 -18.2001fyz_A mol:protein length:527 METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN  ali model follow..  9  1MALSTATKAATDALAANRAPTSVNAQEVHRWLQ-FKNNRTKYATKYKMANETKEQFKLIAKEYARMEAQDALTRLNAGVRVHPKWNETMKVVSNFLEVGE-YNAIAATGMLWDSAQAAEQKNGYLAQVLDEIRHTHQCAYVNYYFAKQDPAGHNDARRTRTIGPLWKGMKRVFSDGFISGDAVECSLNLQLVGEACFTNPLIVAVTEWAAANGDEITPTVFLSIETDELRHMANGYQTVVSIANDPASAKYLNYFTPVLGMLFEYGSKFKVEPWVKTWDRWVYEDWGGIWIGRLGKYGVESPRSLKDAKQDAYWAHHDLYLLAYALWPTGFFRLALPDQEEMEWFEANYP. 377
50 -18.2003dhg_B mol:protein length:327 toluene 4-monooxygenase hydroxylase beta subunit  ali model follow..  7  68..........................................NWDAFTDPDVYRTYNLMQDG--VQSLFDQFNEREHDQMVREGWEHTMARCYSPLRYLFHCLQMSSA-YVQQMAPASTISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLGEHEREEKEPGWQGLRELMEKQLTAFDWGEAFVSLNLVVKPMIVESIFKPLQQQAWENNDTLLPLLIDSQLKDAERHSRWSKALVKHALENPNHAVIEGWIEKWRPLADRAAEAYLSMLSSDILPAQYLERSTSLRASILT........................................................ 326
51 -18.0005hyg_A mol:protein length:317 Uncharacterized protein  ali model follow..  9  35............................................................GRPDFREDMIPFRGHPIWERLSDETRSRLLAYNRNTVLIEQRIANPAFELVIGGLGGQQLELAVAQAMVDEQYHTLMHINGSAVT--RRMRRSDFSDRVLPDSHITTIHQEHLDRCEEPWQRSLTTLGFATVAEISI---NAYLDLLADDQEIQVVNSTTVKLHNRDEYCHASISGEMMKQVYEALPADRRRFLLEKVVAGLEAFVAPDFT-----------------TWESIVAFEGVPG.................................................. 262
52 -17.2002inn_A mol:protein length:511 Phenol hydroxylase component phN  ali model follow..  9  1MVSKNKKLNLKDKYQYLTRDMAWEPTYQDKKDIFPEEDFEGIDWSQWEDPFTMDAYWKYQAEKEKKLYFDAFAQNNGHQNISDARVNALKLFISGISPLEHAAFQG-YSKVGRQFSGAGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDGPHMHDRVWYLSVPKSFFDDARSAGP--FEFLTAISFSFEYVLTNLLFVPFMSGAAYNGDMATVTFGFSAQSDEARHMTLGLEVIKFILEQHEDNVVQRWIDKWFWRGFRLLSLVMLPNKVMSWSEAWEVYYEQNGGALLERYGIRPPKYQDVANDAKHHLSHQLWTTFYQYCQATNFHTWIPEKEEMD---MSEKY 365
53 -16.5003per_A mol:protein length:481 Benzoyl-CoA oxygenase component B  ali model follow..  8  2...........INYSERIPNNVNLNENKTLQRALEQWQPSFLNWNSSNYDVYLRTAVSVDPKGWADFGYVKMHDQDVWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGLT-APSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREEG--EALLERRSGDEDNPRILTAFNEKTPDWLSFFMFTFITDRDGKFQLASL-----AESAFDPLARTCKFMLTEEAHHLFVGESGIARVIQRTCEPTLQKYLNFHYSVTSDLYATYYTNGLKGRFEEEKIGDDHKLQNSEYEVMDVAGDKILTRHVPALSALNERLRDDWITDVQAGVDR.................. 374
54 -16.2003pvr_B mol:protein length:259 Phenylacetic acid degradation protein paaC  ali model follow..  10  1................................................................................MGSSGSNQLTAYTLRLGDNCLVLSQRLGEWCGH-APELEIDLALANIGLDLLGQARNFLSYAAELAGEGDEDTLAFT-------RDERQFSNLLLVEQPNGNFADTIARQYFIDAWH-----VALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVQKMQQAINKLWRFTAELFDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLN................................................... 214
55 -16.0001oq4_A mol:protein length:363 Acyl-[acyl-carrier protein] desaturase  ali model follow..  7  1..ASTLKSGSKEVENLKKPFMPPREVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLD-SPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIE-----------KTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRK........................................................................................... 261
56 -15.6002uw1_A mol:protein length:338 PLASTID DELTA4 MULTIFUNCTIONAL ACYL-ACYL CARRIER PROTEIN DESATURASE  ali model follow..  8  2............................QVTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYGFEEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYMSMLNRCD-EPSAWAMWTRAWTAEENRHGDLLNKYLYLSGR-----------VDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRK........................................................................................... 236
57 -15.5004iit_C mol:protein length:251 Phenylacetate-CoA oxygenase subunit PaaC  ali model follow..  8  2...................................................................................NNPNPVATYALRLGDNGLVLAQRLGAWCGH-APELEIDLALANIGLDLLGQARNFLSYAAELNGCGDEDTLAFG-------RDERQYSNLLLVEQPNGNFADTIARQFFIDVWH-----VALYSRLVNSRDAQLAAIAAKGLKEVRYHLRFSRGWLERLGNGTELRKMQQAVDNLWRFTGELFELSLVEQGIAVDPRELQAEWQSAVHTALLDSGLQ................................................... 212
58 -14.5003sid_A mol:protein length:180 Symerythrin  ali model follow..  10  2.............................................................................GLNYNQEDFM-TDANAASSIEVEMYECDCMYPTFAEIARRPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAET------LEAKRLVSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLE........................................................................................................... 178
59 -11.6004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  12  1....................................................................MVFHKKEPIHVVNIGEANPRFAQLLLEQFGGAELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDKSTLFAVRGMGPHFLDSQGNAWTASYLNEGGDVVRDLRANIAAEA----GARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKL.......................................................................................................... 180
60 -11.3001vjx_A mol:protein length:157 putative ferritin-like diiron-carboxylate protein TM1526  ali model follow..  14  1................................................................................MGSDKIMKVSDILTVAIRLEEEGERFYRELSEH--FNGEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILR------RKDLTLKEVLDIAISVESIILYYE------LKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKRES............................................................................................................. 150
61 -11.2002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  8  17....................................................................................ADFSLEELLGMAIKAEI-GAREFYKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPVAREL--------EKVQDIIDLIRWAMKAEAAEFYLK------LEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLNWE......................................................................................................... 165
62 -10.4001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  12  1................................................................................MKDLKGTKTAENLKQGFIGESMANRRYLAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPA------------------------TDKPIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLKG........................................................................................................... 142
63 -9.9603dde_A mol:protein length:239 TENA/THI-4 protein, Domain of Unknown Function with a Heme Oxygenase-like Fold  ali model follow..  10  37.........................................................................TKALYAIYMTETYHYTKHNAKNQALVGIMGKD----------LPGKYLSFCFHHAHEEAGHELMALSDIASIGFDREDVLSSKPLPATETLIAYLYWIS------ATGNPVQRLGYSYWAENVYGYIDPVLKAIQSTLDLTPQSMKFFIAHSKIDAKHAEEVNEMLHEVKTQEDVDSVVAVMENSLVLTARILDDVWKE............................................................................... 220
64 -9.7803b5o_A mol:protein length:244 CADD-like protein of unknown function  ali model follow..  7  2..............................................MEFNHLTKQLNQLLAQDYVAFSITENPVVQMLSQASFAQIAYVMQQYSIFPKELVGFTELARRKALG-AGWNGVAQELQENIDEEISHYTLLADGLEEGLGVA---------VKNTMPSVATSKLLRTVLSLFDRQVDYVLGATYAIEATSIPELTLIVKLVEWLHEGAIPKDLQYFLDEWEIEHEAGLRTSVAAYIQPEEFGEFAAGFRAMIDAMQVWWQELAQE............................................................................... 228
65 -9.4904di0_A mol:protein length:144 Rubrerythrin  ali model follow..  9  3..............................................................................GSMAQLKGSKTEENLKYAFAGESQANRRYLASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPAT--------------------------GLPFGTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD........................................................................................................... 144
66 -9.4203q4o_A mol:protein length:196 Uncharacterized protein MJ0754  ali model follow..  6  17...............................................................................PISEEEKEGLIEMRE-----EEKLARDVYLTLYNKWKLQ----IFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATI----LDIADLEKWI------NKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISK.................................................................................................. 173
67 -9.2703q4n_A mol:protein length:193 Uncharacterized protein MJ0754  ali model follow..  6  11..............................................................................QPISEEEKEGLIEMRE-----EEKLARDVYLTLYNKWKLQ----IFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATI----LDIADLEKWI------NKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISK.................................................................................................. 168
68 -9.2203hiu_A mol:protein length:166 Uncharacterized protein  ali model follow..  10  1..................................................................................GQSRERLVKWLQDAYAMEKEAETMMAAMASRIEHYPELKRRIEQHVEETQQQSAGVQRCLELLNGSIPTAKG--------MLSSVLASMHAAGNSMMTDEVTKGVGISYAFEHLEI-ASYRALVVAARSAGEQEVAQICEDILQQEIEMAEWLIEHQEAIVVA.......................................................................................................... 154
69 -9.0802oh3_A mol:protein length:167 COG1633: Uncharacterized conserved protein  ali model follow..  8  4......................................................................................YTLAEFLAHAIALETEAAERYVELAMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDENDI--------HYLMTPYHALRYARDNE-----RGMEYYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTPRPS......................................................................................................... 153
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 5 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35