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Query: [DL] KOG3999 Checkpoint 9-1-1 complex, HUS1 component, from VFDB

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRFKTRISNLYTLTRLVQALDKIGRFCWLRLMPETVNFVIVPDFRMTQVWSVLEVETIFEDYVVQSNADNVINLEVPIDNFYKALRSAANASDSTVRLSKKNNQPLLSLSTTWSGRAFGSNIVTHNIPVRVLSQSYVSVIKEPTAPEPDCHIFLPQLNFLRHVVDKYKSLSDRIIMSANMSGELQLSVNIPSARVSTKWKGLENPELDPSQVEDISRHPSQTRAPEEFVHMRLDSKDLVNMLKISSVAKRVIACFCEGHALVLYVYITDPEDEHTAVLTYYISTYVDLast
1 -84.9003ggr_B mol:protein length:286 Checkpoint protein HUS1  ali model follow..  29  1MKFRAKIVDLNHFTRISNMIAKLAKTCTLRISPDKLNFILCDKLAGVSMWCELEQENFFNEFQMESAENNEIYLELTSENLSRALKTAQNARALKIKLTNKHF-PCLTVSVELLSMSSSSRIVTHDIPIKVIPRKLWKDLQEPVVPDPDVSIYLPVLKTMKSVVEKMKNISNHLVIEANLDGELNLKIETELVCVTTHFKDLGNPPLA-------SESTHEDRNVEHMAEVHIDIRKLLQFLAGQQVNPTKALCNIVNNKMVHFDLLHE-----DVSLQYFIPAL.. 279
2 -52.3005hac_A mol:protein length:300 Proliferating cell nuclear antigen  ali model follow..  11  8HMLEAQVQFASLWKRLVECINGLVNEANFDCNPGGLSVQAMDSSHVALVHMLLRDD-CFVKYQC----GRNSILGLNLASLSKVLKIVDSNDSLSLRHDDDSDVVTLTSENPEKTRKCEYQ----------LKLLEIEAESMGIPEMDYRSTVTLNSAEFAKIVRDMQVFGDTVTIAISKE-GVKFSSSGDVGQGYTFLQAAGVSDRSTKSEVKAENAIGVEVTMEEPITLSFALRFMGIFAKGSTLSERVTLKFAKDSPCMVEYGIDN-----VGYLRYYLAPKVD 297
3 -51.0004yhr_A mol:protein length:266 Proliferating cell nuclear antigen  ali model follow..  15  2MMLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVE-AFQEYRC----DHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMDIDADFLKIEELQ----------YDSTLSLPSSEFSKIVRDLSQLSDSINIMITKE-TIKFVADGDIGSGSVIIK---------PFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS------GFLQFFLAPKFN 257
4 -50.8004d2g_A mol:protein length:264 PROLIFERATING CELL NUCLEAR ANTIGEN  ali model follow..  15  3HMFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSE-GFDTYRC----DRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYE----------MKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKD-GVKFSASGELGNGNIKLS---------QTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIAD-----MGHLKYYLAPKIE 259
5 -50.4002zvv_A mol:protein length:276 Proliferating cellular nuclear antigen 1  ali model follow..  10  16..LELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSE-GFEHYRC----DRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFE----------MKLMDIDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKE-GVKFSTAGDIGTANIVLR---------QNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYKVAE-----MGYIRYYLAPKIE 270
6 -50.1002zvw_A mol:protein length:275 Proliferating cell nuclear antigen 2  ali model follow..  11  16..LELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSE-GFEHYRC----DRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFE----------MKLMDIDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKE-GVKFSTAGDIGTANIVLR---------QNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYKVAE-----MGYIRYYLAPKI. 269
7 -50.0003p91_A mol:protein length:265 Proliferating cell nuclear antigen  ali model follow..  12  5CAFHAKFKEAALFKRVVESLKSTIDKTNFDCSDAGIAVQCMDNSHVSLVSLLIETDAFDEF-----QCLKPITLGINLTHLSKILKALDNDCGLILDVKKVDDAVLSITSEGTNKTMKFG-----------LNLVDIEAESVEIPELQSDAIITLSSAEFLKITKDFSALGDDSITIGCTKNEVTLTTKGAMCETCMTLSA-----------LENVDSNGLQIEHNKDVTASFALKQISEFAKSAPLADNVKLSLSGQAPLIMEFKGEA------CVLKFYLAPKFD 258
8 -49.9006e49_A mol:protein length:272 Proliferating cell nuclear antigen  ali model follow..  14  8PMLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVE-AFQEYRC----DHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYS----------LKLMDIDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIMITKE-TIKFVADGDIGSGSVIIK---------PFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS------GFLQFFLAPKFN 263
9 -49.9003lx2_A mol:protein length:259 DNA polymerase sliding clamp 2  ali model follow..  16  1MTFEIVFDSAREFESLIATLEKFFDEAVFQVNMEGIQMRAIDPSRVVLVDLNLPEM-LFSKYSV----ESEEAIAFDLKRFLKVLKLARSRDTLVLRKGGENFLEVGLLGDENTWFK--------------LPLIDANTPEIEIPSLPWTVKAVVLAGALKRAVKAAKLVSDSIYFMATPE-KLTFKAEGNDSEVRTVLT-------------MEDPGLLDLEHKMTKAKSAYGVAYLEDILRSLADADEVIIRFGFDIPLLLKYMVRD-----AGEVSFLIAPRVE 249
10 -49.9005jne_D mol:protein length:258 Proliferating cell nuclear antigen  ali model follow..  13  2..LEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY-----RCDHPVTLGMDLTSLSDILREGNNTDTLTLIADNTPDSIILLFEDTKKDDIAEYS----------LKLMDIDADFLGIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIMITCE-TIKFVADGDIGSGSVIIK---------PFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS------GFLQFFLAPKFN 255
11 -49.9003lx1_A mol:protein length:255 DNA polymerase sliding clamp 1  ali model follow..  16  1MPFEVVFDGAKEFADLIATASNLIDEAAFKFTEEGISMRAMDPSRVVLIDLNLPES-IFSKYEV----EEPETIGINMDQFKKILKRGKAKDTLILRKGDENFLEITFEGTAKRTFR--------------LPLIDVEELELELPELPFTAKVVLLGEVLKEGIKDASLVSDAIKFIAKEN-EFTMKAEGETNEVEIRLT--------------LEDEGLLDLEVEEETKSAYGIRYLSDMVKGIGKADEVILRFGNEMPLQMEYMIRD-----EGRLTFLLAPRVE 248
12 -49.8005a6d_A mol:protein length:249 DNA POLYMERASE SLIDING CLAMP  ali model follow..  16  1MPFEIVFDGAKEFADLIATASNLIDEAAFKITEEGVSMRAMDPSRVVLIDLNLPES-IFSKYEV----EEPETIGINMDHFKKILKRGKSKDTLILRKGDENFLEITFEGTAKRTFR--------------LPLIDVEELELELPELPFTAKVVLLGEVLKEAIKDASLVSDSLKFIAKED-EFTMKAEGETNEVEIKLT--------------LEDEGLLDLEVEEETRSAYGISYLADMVKGIGKADEVTLRFGTEMPLQMDYFIRD-----EGKLTFLLAPRVE 248
13 -49.8004cs5_A mol:protein length:260 PROLIFERATING CELL NUCLEAR ANTIGEN  ali model follow..  10  2..FEARLVQGSLLKKVLEAIKDLLNEASWDCADSGIQLQAMDNSHVSLVSLNLRAK-GFDKYRC----DRNLIMGMNLTSMSKILKCAANDDIITMKAQDNADTVTFMFESPNQEKVSDYE----------MKLMNLDQEHLGIPETDYACVIKLPSGEFARICRDLSQFGESIVIACTKE-GVKFSAAGDIGTANIKLA---------QTSSVDKEEEAVVIEMQEPVTLTFACRYLNMFTKATPLSPQVSLSMSPDVPLVVEYAIGE-----IGHIRYFLAPKIE 256
14 -49.8001sxj_F mol:protein length:283 Proliferating cell nuclear antigen  ali model follow..  14  19SMLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY-----RCDHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYS----------LKLMDIDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIMITKE-TIKFVADGDIGSGSVIIK---------PFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS------GFLQFFLAPKFN 274
15 -49.7005cfk_A mol:protein length:259 Proliferating cell nuclear antigen,Proliferating cell nuclear antigen  ali model follow..  12  2..LEAQVQFASLWKRLVECINGLVNEANFDCNPGGLSVQAMDSSHVALVHMLLRDD-CFVKYQC----GRNSILGLNLASLSKVLKIVDSNDSLSLRHDDDSDVVTLTSENPEKTRKCEYQ----------LKLLEIEAESMGIPEMDYRSTVTLNSAEFAKIVRDMQVFGDTVTIAISKE-GVKFSSSGDVGQGYTFLQ---------AAGVSDRSTKGVEVTMEEPITLSFALRFMGIFAKGSTLSERVTLKFAKDSPCMVEYGIDN-----VGYLRYYLAPKVD 256
16 -49.6001ge8_A mol:protein length:249 PROLIFERATION CELL NUCLEAR ANTIGEN  ali model follow..  16  1MPFEIVFEGAKEFAQLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSS-IFSKYEV----VEPETIGVNLDHLKKILKRGKAKDTLILKKGEENFLEITIQGTATRTFR--------------VPLIDVEEMEVDLPELPFTAKVVVLGEVLKDAVKDASLVSDSIKFIAREN-EFIMKAEGETQEVEIKLT--------------LEDEGLLDIEVQEETKSAYGVSYLSDMVKGLGKADEVTIKFGNEMPMQMEYYIRD-----EGRLTFLLAPRVE 248
17 -49.6004hk1_A mol:protein length:263 Proliferating cell nuclear antigen  ali model follow..  10  5..FEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSD-GFDKFRC----DRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYE----------MKLMNLDQEHLGIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKE-GVKFSASGDVGTANIKLA---------QTGSVDKEEEAVIIEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAIKD-----LGHIRYYLAPKIE 259
18 -49.4005iy4_A mol:protein length:270 Proliferating cell nuclear antigen  ali model follow..  15  2..FEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSE-GFDTYRC----DRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYE----------MKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKD-GVKFSASGELGNGNIKLS---------QTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIAD-----MGHLKYYLAPKIE 256
19 -49.4002io4_B mol:protein length:246 DNA polymerase sliding clamp C  ali model follow..  11  2..MKAKVIDAVSFSYILRTVGDFLSEANFIVTKEGIRVSGIDPSRVVFLDIFLPSS-YFEGFEVS---QEKEIIGFKLEDVNDILKRVLKDDTLILSSNESKLTLTFDGEFTRSFE---------------LPLIQVESTQPPSVNLEFPFKAQLLTITFADIIDELSDLGEVLNIHSKEN-KLYFEVIGDLSTAKVELS---------------TDNGTLLEASGADVSSSYGMEYVANTTKMRRASDSMELYFGSQIPLKLRFKLPQ-----EGYGDFYIAPRAD 246
20 -48.9005zut_A mol:protein length:289 Proliferating cell nuclear antigen  ali model follow..  14  2..LEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVE-AFQEYRC----DHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYS----------LKLMDIDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIMITKE-TIKFVADGDIGSGSVIIK---------PFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS------GFLQFFLAPKFN 255
21 -48.6002hii_C mol:protein length:252 PCNA3 (SSO0405)  ali model follow..  12  1..MKVVYDDVRVLKDIIQALARLVDEAVLKFKQDSVELVALDRAHISLISVNLPREMFKEY-----DVNDEFKFGFNTQYLMKILKVAKRKEAIEIASESPDSVIINIIGSTNREFN--------------VRNLEVSEQEIPEINLQFDISATISSDGFKSAISEVSTVTDNVVVEGHED-RILIKAEGES---------------EVEVEFSKDTGGLQDLEFSKESKNSYSAEYLDDVLSLTKLSDYVKISFGNQKPLQLFFNMEG-----GGKVTYLLAPKVL 245
22 -48.4005tup_A mol:protein length:259 Proliferating cell nuclear antigen  ali model follow..  16  3..LEARLEQASLLKRVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMLLKAE-GFSPYRC----DRNIALGINLVSLTKVLRAAQNEDILTLKADDSPDAVNLMFESAETDRISEYD----------IKLMDIDQEHLAIPETEYAATVEMPSAEFQRICRDLNALSESVVIEATKE-GVKFSCQGDIGSGSVTIR---------QHTSVDKPEQNVSIALSEPVALTFSLKYLVNFCKATSLSSKVTLCLSQEVPLLVEYGLGS------GHLRFYLAPKIG 256
23 -48.2002ix2_C mol:protein length:259 DNA POLYMERASE SLIDING CLAMP A  ali model follow..  13  14INMKVVYDDVRVLKDIIQALARLVDEAVLKFKQDSVELVALDRAHISLISVNLPRE-MFKEYDV----NDEFKFGFNTQYLMKILKVAKRKEAIEIASESPDSVIINIIGSTNREFN--------------VRNLEVSEQEIPEINLQFDISATISSDGFKSAISEVSTVTDNVVVEGHED-RILIKAEGES---------------EVEVEFSKDTGGLQDLEFSKESKNSYSAEYLDDVLSLTKLSDYVKISFGNQKPLQLFFNMEG-----GGKVTYLLAPKV. 259
24 -47.5003aix_A mol:protein length:246 DNA polymerase sliding clamp C  ali model follow..  12  1..MRVKVIDADAFSYIFRTLEEFIDEITLDFTSDGLKIRGIDPSRVTFIDILIPAG-YFEEYNV----EKEEKVGVKLEDFTDVLKTVTKNDSLYLETDENQNIKVTLDGVYERTFT--------------FPSIVASEIETPNLNLEFPFKAKALTVTFTDIIDEIEDIGGDSITFKAEGGKLYLSANSDMGSSTIELS---------------TENGGLLESEGGDAESVYGLEYVVNTSKMRKPSDTVEIAFGSQIPLKLRYNLPQ-----GGYADFYIAPRAE 246
25 -46.4003aix_B mol:protein length:248 DNA polymerase sliding clamp B  ali model follow..  14  2..IKATYSSAKDFYSLLSGLLKVTDEIILNFTEDSIFSRYLTDDKVLMVIFKIPKE-YLEDYTI----DKPLGIKININDLKKILGKAKSKSATVTLEETEAGLKVTVRDEKTGTRSNIY-----------IKGEKTSIDQLTEPKVNLSVTFTTDGDVLKDIARDLSLVGEEVEISADEN-TVTLSTEEAGRTYKSLLK---------------QDKPLKSLNVESPSKAVYSIEVLKDVFKVTSISQNVTVGFGNNIPMKIEVPTDS-----GGQLIFWIAPRL. 248
26 -45.9001ud9_A mol:protein length:245 DNA polymerase sliding clamp A  ali model follow..  12  2...HIVYDDVRDLKAIIQALLKLVDEALFDIKPEGIQLVAIDKAHISLIKIELPKE-MFKEYDV----PEEFKFGFNTQYMSKLLKAAKRKEEIIIDADSPEVVKLTLSGALNRVFN--------------VNNIEVLPPEVPEVNLEFDIKATINASGLKNAIGEIAEVADTLLISGNEE-KVVVKGEGEN---------------KVEVEFSKDTGSLADIEFNKESSSAYDVEYLNDIISLTKLSDYVKVAFADQKPMQLEFNMEG-----GGKVTYLLAPKLS 245
27 -45.2006aig_A mol:protein length:263 DNA polymerase sliding clamp 1  ali model follow..  13  12TDYKAMFREAKVFKELVDSVSKILDEGLFIITGEGLRLRGMDPARVALVDIEIPSS-SFFDFYMAG-DVERVELGVNMETLKGVVARAKKGDQLEVRVREDKVLFIVESVVLRRYL---------------LPNLEVIVDVPEDISLEFDATATVIADVVKKTLRDVELVGDIVEFDAGED-YLSIRSVGPERRRVET-------------RLTRESPALIDLEVKEPATSRYDVGYLKRMLGVAKIAESIELSFSTDKPLKMVFKSPD-----GSRVTYLLAPSTG 263
28 -44.2001rwz_A mol:protein length:245 DNA polymerase sliding clamp  ali model follow..  8  1M-IDVIM-TGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVY-----NIDEEKTIGVDMDRIFDISKSISTKDLVELIVEDESTLKVKFGSVEYKVA---------------LIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKE-GFRIEAKGDVDSIVFHMT-----------------ETELIEFNGGEARSMFSVDYLKEFCKVAGSGDLLTIHLGTNYPVRLVFELVG----GRAKVEYILAPRIE 243
29 -42.7003hi8_A mol:protein length:247 Proliferating cell nuclear antigen PcnA  ali model follow..  13  1M-FKAIV-SAATLRDALDSVSVLVDECKIRLNEESLSIRAVDPANVGMVDLTLDAA-AFESYEAHGGV-----IGVNLSRLEEVAGMAGAGDLIHLTLDEETRKLNIRIDGLSYTLA--------------LIDPDSIRQEPDIPDLDLAANIVLEGTHLDRGIKAADMVSDHIRLRVDGA-EETFHIEAEGDTDDVDLS---------------LPPADLISIEAGAADSLFSLDYLKDMNKAIPTDAEVTVELGEEFPVKLHYQIAE----GMGTITYMLAPRIQ 245
30 -41.2002hii_A mol:protein length:257 PCNA1 (SSO0397)  ali model follow..  8  2..FKIVYPNAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAIMRIPKD-VLSEYSI----DSPTSVKLDVSSVKKILSKASSKKAT-IELTETDSGLKIIIRDEKSGAKSTIY----------IKAEKGQVEQLTEPKVNLAVNFTTDESVLNVIAADVTLVGEEMRISTEED-KIKIEAGEEG---------------KRYVAFLMKDKPLKELSIDTSASSSYSAEMFKDAVKLRGFSAPTMVSFGENLPMKIDVEAVS-----GGHMIFWIAPRLL 250
31 -39.6003g65_B mol:protein length:282 Cell cycle checkpoint protein RAD1  ali model follow..  12  15YSLVASLDNVRNLSTILKAI-HFREHATCFATKNGIKVTV-ENAKCVQANAFIQAGIFQEFKVQEESVTFRINLTVLLDCLSIFGSSPMPGTLTALRMCYQGYGYPLMLFLEEGGVVTV---------CKINTQEPEETLDFDFCSTNVINKIILQSEGLREAFSELDMTSEVLQITMSPDKYFRLSTFGNAGSSHLDYPK--------------DSDLMEAFHCNQTQVNRYKISLLKPSTKALVLSCKVSIRTDNRGFLSLQYMI-RNEDGQICFVEYYCCPDEE 276
32 -38.9003k4x_A mol:protein length:798 Proliferating cell nuclear antigen  ali model follow..  15  540GALEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVE-AFQEYRC----DHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMDIDADFLKIEELQ----------YDSTLSLPSSEFSKIVRDLSQLSDSINIMITKE-TIKFVADGDIGSGSVIIK---------PFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS------GFLQFFLAPKFN 795
33 -36.6003g65_A mol:protein length:296 Cell cycle checkpoint control protein RAD9A  ali model follow..  13  1MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPL-FFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKCCISLNGRSSRLVVQLHCKFGVRKTHN-----------LSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAEVTLGIGRGRRVILRSYHE--------EEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSAESANLNLSIHFDAGRPAIFTI------KDSLLDGHFVLATLSD 267
34 -36.1003pge_B mol:protein length:171 Proliferating cell nuclear antigen  ali model follow..  15  8KMLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVE-AFQEYRC----DHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYS----------LKLMDIDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIMIT............................................................................................................ 171
35 -21.7003pge_A mol:protein length:200 SUMO-modified proliferating cell nuclear antigen  ali model follow..  9  5..........................................................................EVNQEAKPEVKPEVKPETHINLKVSDGSSE--IFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGGGETIKFVADGDIGSGSVI------------------IKPFVDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS------GFLQFFLAPKFN 191
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;