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Query: [R] KOG4095 Uncharacterized conserved protein (tumor-specific protein BCL7 in humans), from VFDB

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLRIFKWVPVTDSKEKEKSKSNSSAAREPNGFPSDASANSSLLLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQSESLSPAHTSDFRTDDSQPPTLGQEILEEPSLPSSEVADEPPTLTKEEPVPLETQVVEEEEDSGAPPLKRFCVDQPTVPQTASESLast
1 -9.8203gdb_A mol:protein length:937 Putative uncharacterized protein spr0440  ali model follow..  10  1MAGHHHQLENLYFQGEE-----------------------------TAVPENSGANTELVSGESEHSTNEADKQNEGEHARENKLEKAEGVATASETASPASNEAATTETAEAASAAKPEEKASEVVAETPSAEAKPKSDKETEAKPEATNQGDESKPAAEANKTEKEVQPDVPKNTEKTLKPK.................. 155
2 -9.4504wse_A mol:protein length:584 Putative poly(A) polymerase catalytic subunit  ali model follow..  5  459......................................................QGKQTSFVYTPEDFFKKDLETQAKLDPSKARFKNTSGNKIMVPKYLLFKIDNNGNIEDNIHSEEAEISEKEETSGGSSISTDKSFEESPNSSPNSSPNNSLNNSIDISTNNYDDRSENSLDSLTSD...................... 584
3 -9.2005ife_C mol:protein length:1304 Splicing factor 3B subunit 1  ali model follow..  10  1MAK----AKTHEDIEAQIREIQGKKAALDEAQGVGLDSTDQEI-----IAATELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQTPGAT 211
4 -9.0106ez8_A mol:protein length:3138 Huntingtin  ali model follow..  12  501..................................................LQADSVDLASCDLTSSATDGDEEDILSHSSSQVSAVPSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQDEDEEATGILPDEASEAFRNSSMALQQAHLLKNMSHCRQPSDSSVDKFVLRDEATEP 652
5 -8.8705z10_A mol:protein length:2547 Piezo-type mechanosensitive ion channel component 1  ali model follow..  7 1315QASRGFALYNAANLKSINFHRQIEEKSLAQLKRQMKRIRAKQEKYRQSQASRGQLQSKDPQDPSQEPGPDSPGGSSPPRRQWWRPWLDHATVIHSGDYFLFESDSEEEEEALPEDPRPAAQSAFQMAYQAWVTNAQTVLRQRRERARQERAEQLASGGDLNPDVEPVDVPEDEMAGRSH....................... 1493
6 -7.8805a5t_C mol:protein length:843 EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C  ali model follow..  12  52........EDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITNYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGVSAAAFLKKKAEAPSGESRKFLKKMEDEDEDSEDSEDDEEWDTGSTSSDSDSEEEEGKQTALASRFLKKAPTTEEDKKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEK. 244
7 -7.7006cc4_A mol:protein length:614 soluble cytochrome b562, lipid II flippase MurJ chimera  ali model follow..  9  1...........................MADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQK...................................................................... 105
8 -7.6501rxt_A mol:protein length:496 Glycylpeptide N-tetradecanoyltransferase 1  ali model follow..  5  2...........................................................................................ADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEA 112
9 -7.4806g1k_A mol:protein length:921 Transient receptor potential cation channel subfamily c member 4a  ali model follow..  10  712LVKRYVAAMIRDATEENFKELKQDISSFRY-EVIGMMKGNRKSTRANKSDTSASDVSHPEGSLQYSSALKQNSKLHLYDVTTALQQQNSEEAKASLGCLANGSAVVLTEPILKDKARSDFPKDFTDFGLFPKKQNPNKIYSLAEEATESDPDILDWGKEDKPLAGKVEQDVNESKCLMEEDERVLEEQEMEHIASSHEHLE. 917
10 -7.2006cmo_R mol:protein length:463 chimera protein of Soluble cytochrome b562 and Rhodopsin  ali model follow..  8  2.......AD-----KDDDDAKLQTMENLY------ADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLMCGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEP........................... 164
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.