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Query: [E] COG0040 ATP phosphoribosyltransferase, from VFDB

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGKLLTMAMPKGRIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRFILAKPMDVTTYVEHGVADVGIAGKDVMLEEERDVYEVLDLNISKCHLAVAGLPNTDWSGVAPRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGLADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDDVIDEMASRLSLVVEGETAKLast
1 -65.500PF01634.18; R4XER3_TAPDE/58-228; ATP phosphoribosyltransferase  ali follow..  31  1.....................................................PAADIPRFVGEGNVDLGITGQDVLAESHIKVDELLDLAFGKCRLQVQVPANGEYQTIGKRVVTSFDFLVKDYFRKLEITTEIKYVGGSVEAACALGVADGIVDLVESGETMRAAGLKAIETVMDTSCCLIQSASPR--HPELIKTILSRVQG........ 171
2 -9.570PF09084.11; M7UJG4_BOTF1/16-238; NMT1/THI5 like  ali follow..  12  6....VYLAQKLG--------YFADEGIKVALLEPND------------------PSDVTEIIGSGKVDMGFKAMIHTLAAKARDFPVTSIGLDEPFTGVVYLKDSGITTDFRSLKGK-KIQIDELTKYYGMDYEAVRCGMNVSKAIIEGSIHAGIGLENDVQMLRIDELAELGCCCFCSILYIANDAFIAQNPEKVRKFMKAVKRATD..... 214
3 -7.250PF02621.14; B9M1W5_GEODF/4-263; Menaquinone biosynthesis  ali follow..  14  23........................................VSKPGLIFNERLEDVETLNRLVLEKTLDVSKISYHLLGYVREDYCLLSAGGAGCGPLVVSKKYESMDQLKGKRIALPGRYTTAALLLRPALTDIIYLPFDRIMGAIADGSVDAGVIIHESRFTYAGLGLVKLLDLGDW-GGIVAKRSLGSEVIAGINSLLRQ........... 200
4 -6.300PF13379.6; B0UDN0_METS4/41-302; NMT1-like family  ali follow..  12  21....LFVAKEKG--------FFAKHGMP------------------EVEVLKQASGTTRDNLVLGSEGNGIDGAHILTNVPVPMHILARLNLNGQCISVAATDKKKAAGKSVKAAMTFPGWIRYWLAAGGIDPDIVVPPPQMVANMKVGTMDCFCVGEPWNAQLVQQGLGYTALTTGEEKAFAMRADWVQKYPNATRALLMAVIEAQQ..... 246
5 -6.160PF11291.8; Q5BTA5_SCHJA/162-261; Protein of unknown function (DUF3091 topsan)  ali follow..  11  7................................................................................................................EMAKDFPNYSANVLEE------VNRCGVTLEQFFTELESKENHTSCTKPENIKEKDLRNLQSIIFDQKTDLVDINVYELRKRFLNKIKKNIQNSARKYSE. 100
6 -5.490PF17396.2; Q28VH9_JANSC/37-124; Domain of unknown function (DUF1611_N) Rossmann-like domain  ali follow..  10  1.............................................................................................................................FRMEGCNADVKVADMDLAAAKASGAKTLVVGIANQGGYISPAWKRVLIEALAEGFDIASGLHNLLSDEPDLVAVAKEYGRQL...... 82
7 -5.370PF05743.13; UEVLD_DANRE/21-141; UEV domain  ali follow..  13  6...............................................................................................................QKVYRVYPDMAGTYTSSDSLQKDLLKLVGNIPVVYQGRSYNIPILL----RPTSSMVIREGKHVDSKGRIHLPALHNWDHPKSSVNALLAEMIGKFEEE... 118
8 -5.340PF02737.18; Q2YR99_BRUA2/5-183; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain  ali follow..  12  1...................................................................TVGIIGAGQMGSGIAHVCALAGY-----NVLLHDAAPDRLEKGIATINGNMARQVASGKLQEEQRADAMKLIRPANSMEDLAGVDLAIEAATEDETIKRKIFAQLCPVLNPEAILATNTSSIS....................... 118
9 -5.230PF09298.11; W4YXP1_STRPU/17-120; Fumarylacetoacetase N-terminal  ali follow..  6  1................................................................................................................................QNLPYGVFSTASNSKQRIGVAIGAVILDLSQIKDLFNGAILSECNDVFTEETLMALGRPAWKEARATLQRLLAADEPTLRDNA.. 86
10 -5.200PF15003.6; D7LFN8_ARALL/19-209; HAUS augmin-like complex subunit 2  ali follow..  6  31............................................................................................................................................TSNGEKGDDLIRVLRELSAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITQILKDVIQNKDR. 102
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.