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Query: [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase, from VFDB

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRGWALast
1 -76.700PF00208.21; DHE3_ORYSJ/176-408; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase  ali follow..  40  1....................................................................................................................................................................................GGSLGRDAATGRGVMYATEALLTEYSESISGSTFVIQGLGNVGSWAAKLIHQKGGKIVAVGDVTGAIRNKSGIDIPALLKHRSEGGSLEDFGAEVMDAAELLVHECDVLVPCALGGVLNRENAAEVKARFIIEGANHPTDTEADEILAKKGVIVLPDIYANSGGVVVSYFEWVQNIQGFMWDEEKVNRELQKYMKNAFQNIKDMCKSQNCNLRMGAFTLGVNRVAKATLLRG.. 233
2 -67.200PF02812.18; R6WCN3_9CLOT/34-162; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain  ali follow..  60  1..................................PERELKVALPVRMDDGSLKVFEGFRIQHSTLRGPAKGGVRYHQNVNVDEVRALSAWMTFKCAVAAIPYGGGKGGIVCRPREMSKGELERLTRTYIDKISAIISPNTDIPAPDVGTNAQTMDWMVDEYSK........................................................................................................................................................................................................................................................... 129
3 -23.600PF05088.12; A4XWG7_PSEMY/77-1608; Bacterial NAD-glutamate dehydrogenase  ali follow..  16  683...RTNFFQADASGAAKSYFSFKLSPRLIPEIPRPVPKFEIFV---------PRVEGVHLRFGDV---ARGGLRWSDREERTEVLGLVKAQQVKNAV--IVPMGAKGGFVPRKRDEVMAEGIACYRIFISGLLDITDNLKEVVAADKGT-ATFSDIANGIAAEYGFWLGDAFASGGSA--GYDHKGMGITAKGGWVSVQRHFRERGIDVQKDNVTVIGIGDMAGDVFGMLLSDKLQLVAAFNHMHIFIDPNPDAAKSFAERKRQMKARFDIAADKLAPTELLNAGIGTYVKSSKENDALRVDGRELRAKVVGEGGNLGMTQLGRVEFGLHGGASNTDFIDNAGGVDCSDHELGEIVSGGDMTEKQRNKLLAEMTDDVSELVLGNNYKQTQALRARERVGEYKRLMNALESAG.. 1172
4 -11.600PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  13  9....................................................................................................................................................................................................LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLSKMGARVLVTEIDP------------------INALQACMDGYQIVTMETAAPLSNIFVTTTGCRDIVRGEHFAVMKEDIVCNIGHFDCEIDVAWL........................................................................................ 121
5 -8.680PF02558.16; Q9K9R6_BACHD/6-154; Ketopantoate reductase PanE/ApbA  ali follow..  15  1.....................................................................................................................................................................................................................VAVIGSGSIGLLLYAYLKLANWPALLVTNRPEQALNKEGLTFVA------KSGEHQPISVTATPLSSFSAEEAEVGFITVKSFAVKAPQLQRKKWDGLVFFQNGMTHLEILRQIPARAICCGDVRVQHTG....................................................................... 138
6 -8.670PF02254.18; Q92CZ9_LISMO/5-120; TrkA-N domain  ali follow..  12  1.....................................................................................................................................................................................................................FAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIR----------NFEHVIVAIGEDILTTLILKEMGVKYVTAKAT---NDKHAKLLDKIGAVVHP.............................................................................. 116
7 -7.480PF10727.9; Q743Y6_MYCPA/8-128; Rossmann-like domain  ali follow..  15  3.................................................................................................................................................................................................................ARLKVGIISAGRVGTALGVALERADHVVVACSAIS----------------HASRQRAQRRLPDTPVATPPEVAAGAELLLLAVPDSELAGAATEAVRAGTIVAHTSGANGVGILAPLTRQGCIP................................................................................ 116
8 -7.300PF01262.21; Q9S227_STRCO/141-353; Alanine dehydrogenase/PNT, C-terminal domain  ali follow..  14  25...............................................................................................................................................................................................................GVLAGRAVVIGGGVSGWNAAQIAIGLGFHVTLLDKDITKLREADKIFGTKIQTVVSNAFELEKA------------LEADLVIGAVL-----------------IPGAKAPKLVTNELVSRMKPGSVLVDIAIDQGGCF.................................................................... 135
9 -7.220PF02826.19; Q98GE4_RHILO/107-283; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain  ali follow..  11  33.............................................................................................................................................................................................................NIELAGKTIGIVGLGAVGQAVGHIAAHGDLKVVATTRSMQP--APEKVGFLSIDALVEQSDIIVLCCPLTPETRGLISRE--LLINVSRGPVVDDDAIEALREGRIGGAALDVFSTQNHPYFGFDNVIITPHMA........................................................................... 177
10 -7.150PF06690.11; D7DUD4_METV3/2-259; Protein of unknown function (DUF1188 topsan)  ali follow..  11  29......................................................................................................................................................................................................ANAIKYYLEGEEFEQAIIFGAYLSGNYIANTLKADCGEVILIDSQPHLEDIVTGNGIKFMDLNTFMLKLRNNKDKE---------INPDLIIDVTGLGGVDPNMLKDFDPKVLI--IEDPKSSFDKELMEADNTHKRLCVGHKKGSLKTFRSSKISKTSGT----------MTLTVDVIMDSCIEIKELDGVLYSVPNLEYFEGIVFHEKDVRKF. 222

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 2 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.