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Query: [C] COG1151 6Fe-6S prismane cluster-containing protein, from VFDB

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSETISEKSEGRVSYHDSVEEMVKKIREDGMSNVFDRYALQEKIRCKFCLEGLSCQLCSNGPCRISEKTGQEKGVCGIGPDAMAMRNFLLKNIMGAGTYSHHAYEAYRTLKATAEGRTPFKITDENKLKWMCEKLGIDTAQSINDMAFELAVILEDQQRIGVEDQNVMVEAFAPKKRIEAWKKLGIYPAGTVHEEQNCVASCLTNVDGSHISLAMKALRLGIATIYNTQIGLEMVQDILFGTPTPHEVNMDLGIMDPEYVNIVFNGHQPWIGAATILKAKTPEIQDMAKQAGAKGLRVVGSIETGQELLQRFPVDEVFVGHMGNWLAIEPLLATGTVDIFAMEENCSPPAIDMYAEKYQVTLAAVSTIIDLPGVNYKFPYDPAQADETAQRLIELGIENFKKRKERQIKPHVPQKIQKAIAGFSTEAVLGALGNKLDPLVDVIAKGQIKGVVALANCSTLRNGPQDWVTINLTKELIKRDILVVSGGCGNHALEVAGLCTLDAANNIAGNGLKAVCNALKIPPVLSFGTCTDTGRISMLVTALAEHLNVDVPQLPIAVTAPEWMEQKATIDGIFALAYGAYTHLSPTPFMTGARQLVDLLTNKAEDVTGGKIALGDDPMKVANDIEDHIMRKRKELGLSLast
1 -80.800PF03063.20; R6MRD8_9BACE/5-545; Prismane/CO dehydrogenase family  ali follow..  18  1....................................................MFCYQCQEAAKGT---GCVLKGVCGKNSSTARYMDLLLFTVRGVSVAASALREQSVKVAAEVDSFVNANFDDESILRRVEKGIALRDDRGITLPEVDELEWKGEKDSFEEKAASVGVLREVNEDLRSLKELLVYGLKGMAAYH---EHAMRLGYNSEEIHAFMQAALAKIADEWVAQVMQAGEMGVKVMALLDEANTTRYGNPEITKVNIGVGKNPGI----LISGHDLHDIEDLLKQTEGTGVDVYTHSEMPAHYYPAFKKYKHFVGNYGNAWWKQREEFTAFNGPIVFTTNCIVPPL---SNATYKERMFTGNSTGYPGCKHIET--GADGHKDYSEVIALAKQCQPPV---------ELETGEIIGGFAHNQVL----QLADKVVEAVKSGAIRRFVVMAGCDGRMKSRD---YYTDFAKALPQDTVILTAGCAKYKYNKLPLGDIN-----------------GIPRVLDAGQCNDSYSLAVIALKLKEVFQLDINELPITYNIA-WYEQKAVIVLLALLSLGVKIHLGPTLPAFLSPNVAKVLVDTFG--IGGITTVDEDLK.................... 541
2 -6.640PF18133.1; A2FFR8_TRIVA/313-432; Hydrogen maturase F tetramerization domain  ali follow..  11  7.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IDTLANLKKGDKVLICETCNHDRIGD--VQIPTKLKKMYPDVEIDWAFGRAYEDALHCGGCMISKQQMNARIQDLAESGVPISNYGLALS................................................................................ 106
3 -6.380PF07327.11; Q966Y0_SCHGR/1-102; Neuroparsin  ali follow..  20  37.......................................VVDLTRCEYGEVTDFFKVCAKGP----SEHCNDFIKCGDGLRCNCGR......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 81
4 -6.340PF13528.6; H8MS55_CORCM/1-323; Glycosyl transferase family 1  ali follow..  9  1...................................................................................................................................................................................................................................................................MRILYGGH-ATRSRVLLEALKEHEVAQRFNVHGIWGLTIAYEGNSVKKWQTVLQNLQGVAGWPQNVRQYFDLVEGFKPDVVVSDFE---TFSYLFAKRHMLPVISVDNMQIINRCTHDPALLAGHEESFSRAIVKAKLPGAFHYLTTTFFPPVRKRRTTLAPSILRPEILAAKPEAGEHLLVYQTATTNTHLPEIL--VDGNLTYRPFSEAGFIDDLRTARAVVAGGGYTLMS-EAVYLRKPLLSIPVGGQFEQVL----NALYLERLGYGMYVKEL-------LDALKTFLSRVP.................................................................................... 314
5 -6.170PF14380.6; Q5N7Q6_ORYSJ/181-286; Wall-associated receptor kinase C-terminal  ali follow..  13  38IVVPVNGSILNSSSQSALPSGEYGQVLKKGFELAWKSRKDKQ------------CNLCE-----------QSRGQCAYSQNR---TFLGCLCADG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 106
6 -6.010PF00290.20; TRPA_MAIZE/94-347; Tryptophan synthase alpha chain  ali follow..  12  16.............................................................................................................................................................................................................................................ITAGDPDLATTAEALRLLDGCGADVIELGSDPYIDGPIIQASVARAL--------ASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRAEMKEAGVHGLIVPDL---AHSLWSEAKNNNLELVLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISK-----PEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKNAL.............................................................................................................................................................. 253
7 -5.950PF04885.13; M4CFF0_BRARP/12-161; Stigma-specific protein, Stig1  ali follow..  14  89...................................NKCMDLSADDKNCGACKNKCQTCCRGQCVYVAYDKRHCGECNHRCNLGEL------CVYGLCNYA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 150
8 -5.720PF01039.22; MCCB_ARATH/93-585; Carboxyl transferase domain  ali follow..  10  48............................................................................................................................................................................................................................................................GIGPIHGRICMFMANDPTVKGGTYYPITIKKHLRAQEIAARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSSDGIPQIIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVEEVSAEDLGGATVHCTVSGVSDYFAQDELHGLAIGRNIVKNLHMAAKQGMEGTFGSKNLVYKEPLYDINELRSIA-------PVDHKQQFDVRSIIARIVDGSEFDLVTGFARIYIGNNGILFNESALKGAH--FIELCSQRKIPLVFMVGSRAEANGIAKAGAKMVMAVS---AKVPKITII-----GASFGAGNYAMC-AAGVLTQIERATKKRQKWTEEEEEAFKKKTVDAYEREANPYYSTARDDGVIDDTRKVL... 473
9 -5.560PF02318.16; H3DKF6_TETNG/7-124; FYVE-type zinc finger  ali follow..  11  15VQRDFDLRKKEEDRLGDLKTKIQKEDTKRELLGNQSRLTESYCIRCLLVNTKRQCLDCQLHICKSCSRYNKRE-PCHMARVLKIGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 110
10 -5.560PF12225.8; F2NGT9_DESAR/111-205; Methylene-tetrahydrofolate reductase C terminal  ali follow..  30  27............................................KCILASTGGICARCSKGPC-----GGSEKGKCEVNPDIDCGWQLIFDRLKILG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 80
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.