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Query: [R] COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides, from VFDB

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIYEIAMLPVQKDKISEFRQAFGDVVPLLKRARGYRGHVLAQGVETPEVFNLIVRWRSLNDHTPGFEASEDHEQFMEGIQDYFSGEPTVYHLEGDNSGWSDYRHGKSGAALast
1 -29.100PF03992.16; HMOB_BACSU/65-140; Antibiotic biosynthesis monooxygenase  ali follow..  2.FAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFEAIRVLRPLD-SDTYVILTLWETESA-FQDWQQSGSYKEAHKK................................ 76
2 -17.800PF07682.11; F4B4D5_ACIHW/1-294; Sulphur oxygenase reductase  ali follow..  20  150RVVAFAEHSVIPGKEKQFEDAIVRTLEMLKKAPGFLGAMVLKEINTPQQYIVHVEWANTDALMFGMGRVPELRQVHDEVLDTLVYGPYIRILNPM............... 287
3 -15.900PF05977.13; Q92SW7_RHIME/14-535; Transmembrane secretion effector  ali follow..  13  425.IVVMIDYEIADEDIPEFLKTMAER-RRIRIRDGAGHWALMRDLENPTTWTHVPTWVEYVRHNQRRTQAD--AAVGDKLTAF-PNPPRVHRM.................. 517
4 -12.500PF11639.8; Q2S9J0_HAHCH/1-104; REDY-like protein HapK  ali follow..  1METIIHKIRLFDVQADAFEFWVQNVYATCPDLPSVVRFDVHRASLQANAYVEVIKITDRAA-FDADMETSTFAGLVQAFSRMAEVVEEL..................... 93
5 -12.200PF08803.11; Q7CGF9_YERPE/4-99; Putative mono-oxygenase ydhR  ali follow..  1..ILQVDFPYTGPWGNEMTKAMEGLARSIAEEPGLIW-KIWTVNETTNEAGGIYLFSDISA------AKAYLAMHTARLKSFGIPHVNGKIFLVNEALSQLDRA...... 95
6 -12.200PF05336.13; F4GKH0_SPHCD/4-103; L-rhamnose mutarotase  ali follow..  5......IMKLKPGCEAEYTRRHNAIWPELKESTSVYDYSIFL--HRESLTLFAFQKLKGDGGSQDLGTDPIVRRWWDYMADLMEVNPD...................... 86
7 -12.100PF16157.5; H2J0N4_RAHAC/1-172; Domain of unknown function (DUF4865 topsan)  ali follow..  1MIAMQYSFTLPADDMGIIEKRIADNGYRTDGFAGLIFKTYLYSRRDENIYAPFYLWQDVSG-MNRFISGAGFQGVANAFG.............................. 87
8 -11.800PF11695.8; Q9A5F4_CAUVC/31-168; Domain of unknown function (DUF3291 topsan)  ali follow..  14  4VNVGRLKAPIDHPMIKDFADNLDRINALAEASPGFVWRLTGEGDSDPLFIPNLSVWSDIPS-LGAFVYRSGHVEIMRRRREWFEH......................... 95
9 -11.500PF07978.13; Q7VX89_BORPE/3-102; NIPSNAP  ali follow..  12  1..IEERDYRIKPGKAGLFVATYEAHGLALQKKYLGRFLGYFMSIGELNHVVAWWAYDSLDERRSRMLADPQWQAYLERVTDLIDL......................... 87
10 -11.400PF13826.6; G7XTL7_ASPKW/119-243; Domain of unknown function (DUF4188 topsan)  ali follow..  1IVVFHLGARNHHPGMKELGDSAEKMQRDMRANPGLLGSSQWLKCDSANEFMTVFYLRDYAA-LHQFAHDEIHMEGVRWWARIAKDHPHLALYHET............... 105
11 -11.300PF07876.12; Q8LQD2_ORYSJ/11-106; Stress responsive A/B Barrel Domain  ali follow..  1.VKHILLARFKEDVAPERLDQLIRGYAGLVDLPSMKAFHWGTDVSIENTHVFESTFESTEG-VKEYIEHPAHVEFANEFLPVLEKTLIIDY................... 95
12 -9.580PF04486.12; D2AY76_STRRD/1-119; SchA/CurD like domain  ali follow..  1MPFVAITYDIKGGNEDRVAEVFSNFSAVVPGADGGQAGRILATIRDSLLVRFIEFEGDLDAVARHMAAQPGVQEVERKLRPYLNSPRDT..................... 96

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.